Anguilla rostrata (American eel): 135257262
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Entry
135257262 CDS
T10705
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arot03021
]
135257262 (taf1b)
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
135257262 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
135257262
NCBI-ProteinID:
XP_064195887
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All DBs
Position
6:42621913..42637489
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AA seq
581 aa
AA seq
DB search
MDEEHTNDYREPCVQCSEVDWGITEEGQFYCRSCHNVIERTQEFVDSSFFANSQSSTIAK
GTKKETKLEHGHEWLVCEGFQFILKHQAEALLALGVCPQFKDEVLCNMWRRYLQKSRQAY
AKRPVHAGKFQLAYDSDSAPESLGFLSDSALQSGGDTEEERSSRPGSISGWSSEGATSVC
SGSLDAGFYGSAHSRRALFQMTMPMTLALCHLALLWVREALTLADLLRFVAEGHVPYVNA
YQGFPEEMKPYGRDIGVFRALSIPAHNLVQKEAHRLAVFLGLPRFPPITPDCLLHPSTLC
LRYLMEANLPDELHDWVSRVIEKTGFGAEALLTYDPKDRRRQLRCHDVLAAALIVVAMKL
LFKLDDKVEWMLSKKADDKSKENQGNTCFSLQTWYETLHHALELAREREEEEMAKRAWKP
RKPLYPSKKFKSVILKRRRVVEELQANFQKLSGSGPGAQPRSPTSFLFRWGEEGTDGPSF
RHHTLDHVTQERGGASHLSNPQYWHTALRKCYPGRCSDHFPEVEPTLPRSYVWVLGFFSF
LLGVKEGRVHREVCSVERRLIKSRPPAGPGGRRRRTARPDE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacatactaatgactacagggaaccctgtgtacagtgttctgaagtggac
tggggcatcacagaggagggccaattctactgcagatcctgtcataacgtgattgagaga
acccaagaatttgtggattcaagtttctttgccaacagtcagtcctctaccatcgccaag
ggtaccaaaaaagagacaaaattagagcatggtcacgagtggctggtgtgtgagggcttt
cagttcatcctcaaacaccaggcagaggccctccttgccttgggagtctgtccgcagttc
aaggacgaggtgttgtgcaacatgtggagacgttatctgcagaagagtcgacaggcctac
gctaagagaccagtgcatgctgggaaattccaattggcctatgactcagacagtgccccg
gagtcgctgggcttcctgagtgactccgccttgcagtctgggggggacacagaggaggag
aggtccagcaggcccgggtccatctcaggctggtccagcgagggggccacctcggtgtgc
tcgggctctctggacgccgggttctacggctccgcccactccaggagggccctgttccag
atgaccatgcccatgaccctggccctctgccacctcgcactgctgtgggtgcgagaggct
cttaccctggccgacctgctccggttcgtggcggagggtcacgtcccgtacgtcaatgcc
taccagggctttccggaggagatgaagccgtacgggagagacatcggcgtgttcagagcg
ctgtctattcccgcccataatctggtccagaaggaggcccacaggctggccgtgttcctg
ggcctcccccgcttccctcccataaccccggactgcctgctccacccttccacgctctgc
ctccggtacctgatggaggccaacctcccagacgagctgcacgattgggtaagcagggtg
atagagaagactgggtttggagcggaggctttgctgacctatgaccccaaggaccggaga
cgccagctccgctgccacgacgtcctggccgccgccctcatcgtagtcgcgatgaagctg
ctgtttaagctggacgacaaggtggagtggatgttatccaagaaagcagatgacaagagc
aaggaaaaccaagggaacacctgcttcagcttgcaaacgtggtacgagacgctccatcat
gccttggagttggcccgagagagggaggaggaagaaatggccaaacgggcatggaaacca
cgcaaacctttgtacccctccaagaaattcaagtctgtcatcctcaagcgaagacgtgtg
gtggaagagctgcaggctaacttccagaagctgtctggctctggccctggcgcccagccc
cgctcccccaccagcttcctcttccgctggggtgaggagggcacagacgggcccagcttc
cgccatcacacattggaccatgtgacacaggagaggggcggggcctcacacctgtccaat
ccccagtactggcacactgcactacgaaaatgttaccccggccgttgcagtgaccatttc
ccggaggtggagcccaccctgcccaggtcctacgtgtgggtgctgggcttcttctccttc
ctgctcggggtgaaggagggccgcgtgcacagggaggtctgcagcgtggagagacggctc
attaaaagcaggccgccagccggaccgggagggaggagaaggagaacagctcggccggac
gagtag
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