Anguilla rostrata (American eel): 135257566
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Entry
135257566 CDS
T10705
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135257566 (ddx1)
03016 Transfer RNA biogenesis [BR:
arot03016
]
135257566 (ddx1)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135257566 (ddx1)
Spliceosome [BR:
arot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135257566 (ddx1)
Transfer RNA biogenesis [BR:
arot03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135257566 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
ERCC3_RAD25_C
Bacteriocin_II
Motif
Other DBs
NCBI-GeneID:
135257566
NCBI-ProteinID:
XP_064196481
LinkDB
All DBs
Position
6:complement(51166246..51175596)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIGQAAEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRASVKTGGAVMNKWQMNPYDRSMAFAIGPDGMCCQSREFKEWH
GCRSTKAVTKGKYYYEVSCHDQGLCRVGWSTAKAALDLGTDKYGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDLDNGHLLFSKNGKELGLAFEIPAHLKNEPFYTACVLKNAELKF
NFGEEDFKFTPKEGFMALCQAPEKYSVKSTQSGSAQVSQVKNMSNAPKALIVEPSKELAE
QTLHVVNQFKKYVDNPHLRDLLIIGGVAAKEQLSVLEQGVDIVVGTPGRLDDLISTGKLN
LSQVRFLVLDECDGLLSAGYTDFIMRIYNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRLWEKLGKNHIQTDEVHAKDNTRPGTN
TPEMWSEAIKILKGEYVVRAVKEHKMDQAIIFCRTKIDCDNMEQHFIKQGGGPDRKGHQL
SCVCLHGDRKPQERKQNLERFKRQEVKFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISMVAMEKEKVWYHVCASRGKGCTKTWLKEDGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRATGGGMYKGHVDVLAPTVQELASLEK
EAQTSFLHLGYLPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttttctgaaatgggtgtgatgcctgagattggtcaggcggcggaggaaatg
gactggctacttccaacagacattcaggctgagtccattcctttaattcttggaggagga
gatgtgctcatggctgcagagaccggtagtgggaagactggggccttcagcattccagtc
attcagatcgtgtatgaaacactgaaggaccagcaggaggggaagaaggggagagcttcg
gtcaagacgggcggtgcagtgatgaacaaatggcagatgaacccatacgacagaagcatg
gcttttgcgattggtccagatggaatgtgctgccaaagcagagagttcaaggagtggcac
gggtgtcgctccacaaaagcagtgacaaaggggaagtactactatgaagtatcttgccac
gaccaaggcctgtgtcgagtggggtggtccacagccaaagctgccctggatttaggcacg
gataaatacggatttggatttggaggaacggggaagaagtctcacaacaagcagtttgac
agttacggagaggaatttaccatgcatgacaccataggatgctacctggacttggataat
ggtcatttgttattttccaaaaatgggaaggagttgggtttggcttttgagatcccagcg
catttaaaaaatgagccattctacactgcttgtgtcttaaagaatgccgagctgaagttt
aatttcggcgaagaagacttcaaattcacccccaaagaaggcttcatggctctgtgccaa
gctccagagaagtatagcgtgaagtcgactcagtcaggaagtgcccaggtgagtcaggtg
aagaacatgtccaacgcgccgaaggccctcatcgtggaaccatcgaaagagctggccgag
cagacgctccacgtcgtcaaccagttcaagaaatacgtggataatcctcacctgagggac
ctgttaatcatcggaggcgtggccgccaaagaacagctctccgtcctggaacaaggggtc
gacatagttgttggaacgcccggtcgactggatgacctcatctcgaccggaaagctgaac
ctctctcaagtgcggttcctggttctggatgaatgcgatgggctcctctcagcaggatat
actgatttcatcatgagaatctacaaccagattccccagattacatctgatggaaagaga
ttacaggtgatcgtgtgctcggcgacgctgcactccttcgacgtgaagaagctgtcggag
aagatcatgcacttccccacctgggtggacctgaagggggaggactccgtgccggagacg
gtccaccacgtggtggtgcccgtcaaccccaaaaccgaccggctgtgggagaagctcggc
aagaaccacatccagacggacgaagtgcacgctaaggacaacacgaggcccggcaccaac
acaccagaaatgtggtctgaggccattaaaatcctgaagggggagtacgtcgtcagagcc
gtcaaagagcacaagatggatcaggccatcatcttctgcaggaccaaaatagactgcgac
aacatggagcagcacttcatcaagcagggtggaggaccggacaggaaaggacaccagtta
tcctgcgtctgtctccatggagacaggaaaccccaggagcgcaagcagaacctggagcgg
ttcaagagacaggaagtgaagttcttgatctgcaccgacgtggcggcgcgagggatcgat
atccgcggcgttccgtacgtgatcaacgtcactctgccggatgagaagcagaactacgtt
caccgtatcggaagggtggggagagctgaaaggatgggtttggccatatcgatggtggct
atggagaaggagaaggtgtggtaccatgtgtgtgccagcagggggaagggctgcaccaag
acctggctgaaggaggatggaggatgcaccatatggtacaatgagaaagagctcctgtcc
gaaatcgaggagcacctgaagtgcaccatcacccagtgcgagccggacatcaaagtgccc
gtggacgaattcgacgggaaggtgacctacggccagaggagggccaccggaggtgggatg
tataagggtcacgtggacgtgctggcccccacggtccaggagctggccagtctggaaaag
gaggcccaaacatccttcctgcatctgggctacctacccaatcagctgttcagagctttc
tag
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