Anguilla rostrata (American eel): 135257597
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Entry
135257597 CDS
T10705
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135257597 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135257597 (cdc40)
Spliceosome [BR:
arot03041
]
Complex C
Other components
Step II factors
135257597 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
135257597
NCBI-ProteinID:
XP_064196542
LinkDB
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Position
6:52032306..52063998
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AA seq
578 aa
AA seq
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MSVGVASLVSYGTDSDSDNDAETNIKPEKTDPDAIAHLLPLSSGKKTSLTVLNSAPEVAV
KEDVMTGTHLDPSLKEVTFNPTYETMFAPEFGPVNPFKTQQMAAPRNMLSGYAEAAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSSYIGAVDEAEKNKGLTVFEAGAKKSEKRKKL
KGGDASEIDSFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKKGKNEEDAPAEEKTVL
HVKDMYDYQGRSYLHIPQDVGMNLRTADIPDKCYLPKKQLHVWSGHTKGVSAIRLFPLSG
HLLLSSSMDCKIKLWEVYKDRRCIRTFIGHSKAVRDICFNNTGTQFLSAAYDRYLKLWDT
ETGKCISRFTNRKVPYCVKFNPDEDKQSLFVAGMSDKKIVQWDVRTGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcggcgtggcgtctcttgtatcgtacggaactgattcagactcggataatgat
gccgagacgaatataaaaccagaaaagacagacccagacgcaatcgctcatcttcttcct
ctaagttctggaaaaaagacttcattaacggtcctaaattcagctccagaggtcgcagta
aaggaagatgtgatgaccggaactcacctggacccctcgctaaaggaggtcaccttcaat
ccaacatacgagaccatgttcgccccagagtttggcccggtcaacccattcaaaacccag
cagatggcagctcccagaaacatgctgtcggggtacgctgaggcagctcatgtcaacgac
tttatgtttgaacagcagcggcggacgttttctaccttcggctacgcgctcgatccgtcc
gtggacaccagccaggtctcctccagcagctacatcggagcggtcgatgaggccgaaaag
aacaaaggactgaccgtcttcgaggccggcgcaaagaaatcggagaagaggaaaaagctg
aaagggggcgacgcttccgaaatcgacagcttcctgggaccctgggccaagtacgtggac
gagaaggaggtggccaagccctcagaagaggagcagaaggagctggacgagatcaccgcc
aaacgacagaagaaagggaagaacgaggaggacgccccagcggaggagaagaccgtcctc
cacgtcaaggacatgtacgactaccagggccggtcgtacctccacatcccgcaggacgtg
gggatgaacctgcgcacggccgacatcccggacaagtgctacctgcccaaaaaacagctg
cacgtctggtccgggcacaccaagggcgtcagtgccatacgtctgtttcctctttctggc
cacctgctgctgtcctcttccatggactgcaaaatcaagctgtgggaggtgtataaagat
cgaaggtgcatacggacgtttatcggacacagtaaggccgtgcgggacatctgttttaat
aacactggaactcagttcctcagcgccgcctatgaccgctacctgaagctgtgggacacg
gagacagggaagtgcatctcgcgattcaccaataggaaagtgccgtactgcgtcaagttc
aacccggacgaggacaagcagagcctgttcgtggcggggatgtccgataagaaaatcgtc
cagtgggacgtccggaccggggaggtggtccaggagtacgacagacatctgggggccgtc
aacaccatcaccttcgtggacgaaaacagacgcttcgtcagcacgtccgacgacaagagt
ctgcgagtttgggaatgggacattcctgtggacttcaagtacatcgccgagcccagtatg
cactccatgcccgctgtgaccctgtcaccaaacgggaagtggctggcctgccagtccatg
gataaccagatcctgatcttcggggcgcagaaccgcttccggctcaacaagaagaagatc
ttcaagggtcacatggtggcgggctacgcctgccaggtggacttctcccccgacatgagc
tacgtggtgtcgggcgacgcggacgggaagctgaacatctgggactggaagaccaccaag
ctgtaccaccgcatcaaggcccacgacaaggtgtgcatcagcgccctgtggcacccgcac
gagacctccaaggtcatcacctgcggctgggacggacagatcaagctgtgggactag
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