Anguilla rostrata (American eel): 135257862
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Entry
135257862 CDS
T10705
Symbol
cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135257862 (cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135257862 (cpsf2)
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135257862 (cpsf2)
U7-dependent histone pre-mRNA processing factors
135257862 (cpsf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
135257862
NCBI-ProteinID:
XP_064197127
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Position
6:complement(31430237..31510914)
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AA seq
789 aa
AA seq
DB search
MKMTSIIKLTALSGVQEESALCYLLQVDEFRFLLDCGWDESFSLDIIDAIKRHVHQVDAV
LLSHPDPLHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDD
VDSAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNH
KREIHLNGCSLEMVNRPSLLITDSFNATYVQPRRKQRDEQLLTNVMETLRGDGNVLIAVD
TAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDK
RNNPFQFRHLSLCHSLADLTRVASPKVVLCSQPDLESGFSRELFIQWCRDAKNSVILTYR
TTPGTLARYLIDNPGERILDLEIRKRMKLEGRELEEYLEKEKLKKEAAKKLEQAKEVDVD
SSDESDLEDDLEQPAVTKTKHHDLMMKGEGGRKGSFFKQAKKSYPMFPTHEERIKWDEYG
EIIRPEEFLVPELQATEEEKSKLESGIANGDEPMDQDLSDVPTKCISTTETIEISARIAY
IDYEGRSDGDSIKKIINQMKPRQLVIVHGPPEASLDLAESCKAFSGKDIKVYTPKLQETV
DATSETHIYQVRLKDSLVSSLQFYKAKDTELAWIDGVLDMRVIKVDTGVVVEEGEMNEEA
EEGELPMEVTSSLTADHSAVAQQRAMKSLFGEDDKEVSEESDVIPTLEPLTSQEIPGHQS
VFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTEAGRIGLEGCLCDDYYKIRD
LLYQQYAVV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacatccattatcaagctgactgccctctccggtgtgcaggaagaatctgcg
ctttgctacctgttacaggtggatgagtttcgtttcttacttgactgcggttgggatgag
agcttctctctagacatcatcgatgctataaaaaggcatgttcatcaagtggatgcagtc
ctcctctcccaccctgatcccctacaccttggagctttgccgtatgctgtagggaaacta
ggccttaactgcaccatttatgccaccattcctgtgtacaagatgggacagatgttcatg
tacgacttgtatcagtctcgtcacaatactgaggacttcaccttgttcaccctggacgat
gtggattctgcctttgacaagatacagcagctaaagtactctcagatagtgaatttgaaa
gggaaagggcatggcctgtccatcaccccactccctgccggtcacatgattggcggaacc
atttggaagattgtgaaggatggggaagaggagattgtgtatgctgtggacttcaaccac
aagagggagatacacctgaacggctgctctctggagatggtgaatcggccttccctgctc
atcacagactctttcaacgccacctacgtgcagccacgcagaaaacagcgtgatgagcag
ctccttaccaacgtgatggagaccttgcgaggcgatggaaatgtgctgatcgccgtggat
acagcgggccgggttctggaactggcacagctgttggatcagatctggaggacaaaggat
gctggacttggggtttactcgctcgccctcctgaacaacgtcagctacaatgtggtggag
ttttcgaagtcccaggtggagtggatgagtgacaagctgatgagatgctttgaggacaag
cggaacaaccccttccagtttcgccacctgtccctgtgtcacagcctggctgacctgacg
cgggtggccagccccaaggtggtgttgtgcagccagcctgacttggagtcaggtttctcc
cgtgaacttttcatacagtggtgcagagatgcgaagaactcagtcatcctgacataccgg
accacgcctggcaccctggcccgctacctcatcgataatccaggggagaggatcctggac
ctggagattaggaaacggatgaagcttgaaggtcgtgaacttgaagaataccttgaaaag
gaaaagctgaaaaaagaggctgctaaaaagcttgaacaagctaaagaggtggatgtggac
tccagtgacgagagcgacctggaggatgacctagagcagccagcggtgacaaagaccaag
caccatgacctgatgatgaagggtgaggggggccgcaagggcagcttcttcaaacaggcc
aagaagtcctaccccatgttcccaacccatgaagagaggatcaagtgggatgagtatggg
gagattatccggccagaggaattcttagttccagaactccaggccactgaagaggagaag
agcaaactagaatcaggaatagcaaacggagatgaacccatggatcaggacctctctgat
gtccccaccaaatgcatatccacaacagagaccatagagatcagtgccagaattgcatac
atcgattatgagggtcgctcggacggagattccatcaagaagatcattaaccagatgaag
ccaaggcaattggtgattgtgcacgggccccctgaagccagcctggacctggccgagtct
tgcaaagctttcagcgggaaggacatcaaggtgtatacacccaagctgcaggagaccgtg
gatgccaccagcgaaacacatatctatcaggtacgactgaaggactctcttgtgagttca
ctgcaattctacaaggctaaggacacagagcttgcctggattgacggggtgctggatatg
cgcgtgataaaggtggacaccggtgtggtggtggaggagggtgagatgaatgaggaggca
gaggagggcgagctgcccatggaggtgacttccagtctgacagcagaccacagtgccgtg
gcccagcagcgtgccatgaagagcctgtttggagaggatgataaggaagtgtctgaggag
agtgatgtcatacccacccttgagccactaacatcacaagagatcccaggtcatcagtct
gtttttatcaatgagcctcgcctgtcggactttaagcaggttttgctgagggaaggcata
caggctgagtttgtcggaggagtgctggtctgtaacaacctggttgcagttcgcagaaca
gaagctgggcgaattggcttagaaggctgtctgtgtgatgactactacaagatccgtgac
ctgctctatcagcaatatgctgtggtttag
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