Anguilla rostrata (American eel): 135257931
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Entry
135257931 CDS
T10705
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04510
Focal adhesion
arot04512
ECM-receptor interaction
arot04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135257931
Glycosaminoglycan binding proteins [BR:
arot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135257931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135257931
NCBI-ProteinID:
XP_064197220
LinkDB
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Position
6:complement(3665977..3701264)
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AA seq
1627 aa
AA seq
DB search
MAGARRSAGRISWCHLTLWWFVLFQLSQRRADGGELLEPCRGRDCSVCQCFPAKGSQGLP
GPPGCHGRQGPGGPPGLQGPQGEKGRAGVSGDPGEEGEDGDVGMTGVPGFPGVDGVPGHP
GAGGLRGLPGRDGCNTSRGDPGVPGFSGAHGRPGMAGHPGVKGQKGDPIYATASAGPPGD
AGQKGYPGVPGQHGVTGPRGPPGWSGPEGLQGVPGVPGTRGAHGDTGRSLPGQKGDEGDQ
GIQGPPGRFEIVEPPIETYQKGERGEQGRKGDCGVSGTDGACSPPGEKGEKGVIGLPGPR
GFPGPQGPPGYPGSQGPSGNAGLPGLIGNLGPKGYIGDPGPKGRPTFQYIDQNGDAGSIG
STGPPGQVGEPGDPGWIGLPGLPGQSLRGSPGRPGGPGFRGAKGVKGDPGRSYTVPIPGP
PGLPGTPGAKGPPGPPGPPGYACLPGQPGDEGDQGPPGAPGEKGKRGCAGECFCEEDGAP
GPVGPRGQPGQPGVPGREGNRGDPGPRGDAGGPGHHGNPGFPGFLGSKGQKGEPYVAHIK
GVKGEVGFPGPRGTPGLRGETGEDGAPGFPGDPGAPGDGHSGLLGDRGYPGPDGFKGPPG
PAGPPGPGIAGPVGVPGPQGDPGPPGKTGLQGTKGVKGDTLPCINPEPGPPGPQGDPGPA
GDPGVPGLPGFPGHSGSAGPKGRRGDPGYPGVTTGVRGVRGDPGHPGRPGRAFPKGHLGP
KPLLRGNFFGCWPPLCCGVSSGPRGQPGRGGRKGDQGERGDPGLTGPPSPCPCPCTDEPG
PPGQQGPPGDKGSPVGYPGEKGMLGEVGQPGRVRKGPSGDLGPPGPPGHPGPPGPPGTSG
DPGNLGQRGAKGNRGPPGNTGSPLPGRPGPIGRQGRRGEPGINGPAGPLGPTGPKGRKGE
QGQPGKPGSRNMFKGVKGDQSRGPQGFTGPRGQKGEPGSSGQSGQDGLPGFAGSPGQPGI
PGAGPPGLPGHPGVPGGLGCNGSLGFPGDQGDLGHSGPPGPPGPFGYSGMKGDIGDSVNN
PGPPGLPGPPGDGGKPGGAGLKGDRGDPGFSGLTGNRGGPGPKACPGPPGPPGPPGFPGL
TGAQGYAGPAGPPGPSGPPGPPGNPGPSGAPGPPGIAGLDGLRGVKGERGSRGSGEWGPR
GPQGFPGDQGPTGSPGPKGTSLWGPKGQRGREGSPGEPGLPGDAGVPGRDCYDVTHGPPG
EPGNPGRPGQPGPPGVIGLPGTVLPFRGEIGDPGLPGRPGPKGEAGPRGLPGSPGFPGPP
GSKGAKGLMGMMGIPGPGGIPGPAGPPGCRGDKGMTGEPGAKGPPGDLVNSDPFPRPGSL
GPPGPPGPPGFPGNPGPSGEEGPAGRKGQPGSPGLPGTVGTPGPAGVPGEPGIDGVRGFA
GPQGAPGPPGEQGPPGTSRTYSHGFLLVIHSQSEEIPVCPVDMVTMWNGYSLLYLEGQEK
AHTQDLGQAGSCLRVFSTMPFSYCNVASCDYAGRNDKSYWLSTTAAAPAAPASGAEIRRH
VSRCAVCEAPAPAVAVHSQDGDTPPCPPRWRSLWAGYSFLMHTGSGDEGGGQSLTSAGSC
LKDFRSQPFIECQGPRGTCHYFSSAYSFWLTRVGVAEQFSPAPAAGTLKEAWQQRQTTSR
CNVCMKE
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggctggggcgaggagaagcgccggccgcatcagctggtgtcacctgaccctgtggtgg
tttgtactttttcagctctcccagcgaagggccgatgggggagagttgctggaaccctgc
cgtgggagagactgctctgtgtgtcaatgtttcccggcgaaaggatctcaaggtttgccg
ggacccccgggttgccatggtcgacaggggcctgggggcccaccagggctccaggggcca
cagggagaaaaaggaagagcaggtgtcagtggtgatcctggggaagaaggggaagacggt
gacgtgggcatgactggggtccctgggtttcctggagtcgacggcgttccaggtcacccc
ggggctgggggtcttcggggtctccccggacgggacggctgcaacacgtcgagaggggac
cccggtgtccctgggttttcgggggcgcacgggcgtccagggatggcgggacatccaggg
gtgaaaggtcagaagggggatcccatctatgccacagcctccgcaggccctccgggtgat
gctggacagaagggatatcctggtgtgcctgggcaacatggtgttactggtcccaggggt
ccacctggctggtcaggaccagaggggctgcagggagtccctggtgtgcctggaacaaga
ggagcgcatggtgacacaggccggtcactgcctgggcagaagggtgatgagggagatcag
gggatccaaggtcctcctggacgctttgagatcgtggagcccccaatcgagacataccaa
aaaggagaaaggggggagcaaggcagaaagggagattgtggagtcagtggtactgacgga
gcatgttcaccccctggagagaagggagagaagggagtcatcgggcttcctggacctcgg
ggatttcctggcccccagggtccacctggctaccccggatcacagggaccttctgggaac
gccggacttcctggcctgattggcaacctgggcccaaagggctacataggagacccagga
ccaaagggtagaccaacctttcagtacatcgatcaaaatggggatgcaggaagtattggc
agcactggacctccaggacaagtgggggagccaggggaccctgggtggattggcctccca
ggactaccagggcagtccctcagaggttcaccaggccggccaggtggcccagggttccgg
ggcgcaaagggggtgaagggggaccccgggaggtcctacacggtccccataccgggaccg
cctggcctaccggggaccccaggggccaagggacctcccggtcctccaggacccccaggg
tatgcctgcctcccaggtcagcctggagatgaaggagaccaaggcccacctggagctccg
ggggaaaaaggaaagagaggctgtgcaggggagtgtttttgtgaggaggacggtgcccca
ggccctgtgggccctcgggggcagccagggcagcccggggtgcctggcagagagggcaat
aggggagatcctggcccccgcggggacgcaggaggacccggacaccatggaaatccaggg
ttcccaggttttctggggtcaaaaggtcagaaaggggaaccctatgtggcacacattaaa
ggggtgaaaggtgaggtgggctttcccggtcccaggggcacccccggtctcaggggagaa
acaggagaagatggagctcctggtttcccaggggaccccggagcaccgggtgacggtcac
tcagggttgctgggtgacagagggtacccaggaccagatgggttcaaaggccccccagga
cccgccggaccgccaggccctgggattgcgggcccggtgggggtgccgggtccccaggga
gatccgggccccccggggaagacagggctccagggaacaaaaggcgtcaaaggtgacaca
ctgccatgtataaacccggaacccggcccaccaggaccgcagggtgaccctgggccagcc
ggtgatccgggcgttccaggccttccaggttttccgggacattccggttctgccggccct
aagggaaggagaggcgatcctgggtacccaggagtaaccacaggggtaagaggggttcga
ggtgatccaggacacccaggccgtcctgggcgagccttcccaaagggacacctgggcccc
aaacctttactgagggggaatttttttgggtgctggccacccctgtgctgtggcgtctcc
tcaggaccccgaggacagcccggcagagggggtcggaaaggggaccagggagagaggggg
gacccaggcctgacaggtccgcccagcccctgcccatgcccctgtaccgatgaacctggg
cccccaggccagcagggcccccccggggacaaaggctccccagtaggttatcctggagag
aaaggcatgctgggagaggtcggccagcctggcagagtcaggaaggggccttctggtgac
ttgggtcctccgggaccacctgggcaccctggacctcccggccccccaggaacctcgggg
gaccccggaaatctggggcaacgcggggcgaaaggtaaccgcggtccccctggcaacacc
ggatctcctttacctggaaggccaggccccatcggacggcaaggaaggagaggggagcca
ggcatcaatggccctgctgggccacttggacccacggggccgaaagggagaaaaggggaa
caaggccaacctgggaagcctggatccaggaacatgttcaaaggggtaaagggggaccag
tcgcggggaccacagggattcactggtcccagaggtcagaaaggggagccaggcagcagt
ggccagtccggccaggacgggttgccaggtttcgctgggtcgccaggtcaaccagggata
ccaggggctggcccacctggcctaccgggccatcccggggtacctggaggcctggggtgc
aatgggtcactcggtttcccgggagaccagggtgaccttgggcacagtggcccccccgga
ccccccggtccgtttgggtactccggaatgaaaggtgacatcggagactcagtgaacaat
ccggggccacctggactgcctggtcccccaggagatggaggaaaaccaggtggtgcgggt
ttgaagggtgacagaggggacccaggtttctctggcctcacagggaacagggggggccct
ggtcccaaagcatgccctggcccaccagggcctccaggaccacctggtttcccaggtctg
acaggtgcacaggggtatgccggcccagcagggccaccaggaccaagcggccctccgggg
cccccaggaaaccctggcccctcaggtgccccgggacctccaggtatcgccggtctggat
ggtctgagaggcgtgaagggagagagagggagcagaggcagtggtgagtggggccccagg
ggaccccaaggattccccggggaccagggacctacaggcagccctggacccaaaggcaca
tctctctggggtcccaaaggacagagggggcgtgaggggtcaccaggtgaaccagggctc
cctggtgatgctggtgttcctggcagagactgctatgatgtcacccatggaccaccagga
gagcctggtaatcctggtagacccgggcaaccagggccgccaggggttattgggctgccg
gggacggtgcttccatttcggggggaaatcggggatcccggtttaccaggacgcccaggt
ccgaagggggaggcgggtcccagaggactcccaggaagcccagggtttccagggcccccg
ggttccaaaggcgcaaaagggctgatgggaatgatgggtatcccagggcccgggggcatc
cccggccctgctggccccccaggatgcagaggagacaaagggatgactggagagccaggt
gccaaaggtcctcctggggatttggtgaactctgatccgttccccagacccggttcgctg
ggcccccctggtcctccggggcctcctggtttccctggcaacccgggaccaagcggagaa
gaaggtcctgcagggagaaagggtcagccagggtcacctggattaccaggtacagtcgga
accccgggaccagccggagttccgggagagcctggcattgacggagtgcgagggtttgcg
ggacctcaaggggcccctggtccgccaggtgagcagggacccccaggtacttccaggacc
tacagtcatggcttcctgttggtgatccacagccaatcagaagagattcctgtttgtcca
gtagacatggtcactatgtggaatggctacagtttactatacctggaggggcaggagaaa
gcgcacacacaggaccttggtcaggccgggtcatgtctgagggtcttcagcaccatgccg
ttctcgtattgcaacgtggcctcctgcgactacgccgggcggaacgacaagtcgtactgg
ctgtccaccacggcggcggcgcccgcggcgcccgcgtcgggcgccgagatccgccggcac
gtcagccgctgcgcggtgtgcgaggcccccgcccccgccgtggccgtgcacagccaggac
ggcgacacgcccccctgtcccccgcgctggaggagcctgtgggcggggtactccttcctc
atgcacacgggctcgggcgacgagggcggcgggcagtcgctgacctcggcgggcagctgc
ctgaaggacttccgcagccagcccttcattgagtgccagggcccgcgcggcacctgccac
tacttctccagcgcctacagcttctggctgacgcgcgtgggcgtggccgagcagtttagc
cccgcccccgccgccggcacgctgaaggaggcgtggcagcagcggcagaccaccagccgc
tgcaacgtctgcatgaaggagtga
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