KEGG   Anguilla rostrata (American eel): 135257931
Entry
135257931         CDS       T10705                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot04382  Cornified envelope formation
arot04510  Focal adhesion
arot04512  ECM-receptor interaction
arot04518  Integrin signaling
arot04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arot00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135257931
   04518 Integrin signaling
    135257931
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135257931
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135257931
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135257931
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arot04147]
    135257931
   00536 Glycosaminoglycan binding proteins [BR:arot00536]
    135257931
Exosome [BR:arot04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135257931
Glycosaminoglycan binding proteins [BR:arot00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135257931
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135257931
NCBI-ProteinID: XP_064197220
LinkDB
Position
6:complement(3665977..3701264)
AA seq 1627 aa
MAGARRSAGRISWCHLTLWWFVLFQLSQRRADGGELLEPCRGRDCSVCQCFPAKGSQGLP
GPPGCHGRQGPGGPPGLQGPQGEKGRAGVSGDPGEEGEDGDVGMTGVPGFPGVDGVPGHP
GAGGLRGLPGRDGCNTSRGDPGVPGFSGAHGRPGMAGHPGVKGQKGDPIYATASAGPPGD
AGQKGYPGVPGQHGVTGPRGPPGWSGPEGLQGVPGVPGTRGAHGDTGRSLPGQKGDEGDQ
GIQGPPGRFEIVEPPIETYQKGERGEQGRKGDCGVSGTDGACSPPGEKGEKGVIGLPGPR
GFPGPQGPPGYPGSQGPSGNAGLPGLIGNLGPKGYIGDPGPKGRPTFQYIDQNGDAGSIG
STGPPGQVGEPGDPGWIGLPGLPGQSLRGSPGRPGGPGFRGAKGVKGDPGRSYTVPIPGP
PGLPGTPGAKGPPGPPGPPGYACLPGQPGDEGDQGPPGAPGEKGKRGCAGECFCEEDGAP
GPVGPRGQPGQPGVPGREGNRGDPGPRGDAGGPGHHGNPGFPGFLGSKGQKGEPYVAHIK
GVKGEVGFPGPRGTPGLRGETGEDGAPGFPGDPGAPGDGHSGLLGDRGYPGPDGFKGPPG
PAGPPGPGIAGPVGVPGPQGDPGPPGKTGLQGTKGVKGDTLPCINPEPGPPGPQGDPGPA
GDPGVPGLPGFPGHSGSAGPKGRRGDPGYPGVTTGVRGVRGDPGHPGRPGRAFPKGHLGP
KPLLRGNFFGCWPPLCCGVSSGPRGQPGRGGRKGDQGERGDPGLTGPPSPCPCPCTDEPG
PPGQQGPPGDKGSPVGYPGEKGMLGEVGQPGRVRKGPSGDLGPPGPPGHPGPPGPPGTSG
DPGNLGQRGAKGNRGPPGNTGSPLPGRPGPIGRQGRRGEPGINGPAGPLGPTGPKGRKGE
QGQPGKPGSRNMFKGVKGDQSRGPQGFTGPRGQKGEPGSSGQSGQDGLPGFAGSPGQPGI
PGAGPPGLPGHPGVPGGLGCNGSLGFPGDQGDLGHSGPPGPPGPFGYSGMKGDIGDSVNN
PGPPGLPGPPGDGGKPGGAGLKGDRGDPGFSGLTGNRGGPGPKACPGPPGPPGPPGFPGL
TGAQGYAGPAGPPGPSGPPGPPGNPGPSGAPGPPGIAGLDGLRGVKGERGSRGSGEWGPR
GPQGFPGDQGPTGSPGPKGTSLWGPKGQRGREGSPGEPGLPGDAGVPGRDCYDVTHGPPG
EPGNPGRPGQPGPPGVIGLPGTVLPFRGEIGDPGLPGRPGPKGEAGPRGLPGSPGFPGPP
GSKGAKGLMGMMGIPGPGGIPGPAGPPGCRGDKGMTGEPGAKGPPGDLVNSDPFPRPGSL
GPPGPPGPPGFPGNPGPSGEEGPAGRKGQPGSPGLPGTVGTPGPAGVPGEPGIDGVRGFA
GPQGAPGPPGEQGPPGTSRTYSHGFLLVIHSQSEEIPVCPVDMVTMWNGYSLLYLEGQEK
AHTQDLGQAGSCLRVFSTMPFSYCNVASCDYAGRNDKSYWLSTTAAAPAAPASGAEIRRH
VSRCAVCEAPAPAVAVHSQDGDTPPCPPRWRSLWAGYSFLMHTGSGDEGGGQSLTSAGSC
LKDFRSQPFIECQGPRGTCHYFSSAYSFWLTRVGVAEQFSPAPAAGTLKEAWQQRQTTSR
CNVCMKE
NT seq 4884 nt   +upstreamnt  +downstreamnt
atggctggggcgaggagaagcgccggccgcatcagctggtgtcacctgaccctgtggtgg
tttgtactttttcagctctcccagcgaagggccgatgggggagagttgctggaaccctgc
cgtgggagagactgctctgtgtgtcaatgtttcccggcgaaaggatctcaaggtttgccg
ggacccccgggttgccatggtcgacaggggcctgggggcccaccagggctccaggggcca
cagggagaaaaaggaagagcaggtgtcagtggtgatcctggggaagaaggggaagacggt
gacgtgggcatgactggggtccctgggtttcctggagtcgacggcgttccaggtcacccc
ggggctgggggtcttcggggtctccccggacgggacggctgcaacacgtcgagaggggac
cccggtgtccctgggttttcgggggcgcacgggcgtccagggatggcgggacatccaggg
gtgaaaggtcagaagggggatcccatctatgccacagcctccgcaggccctccgggtgat
gctggacagaagggatatcctggtgtgcctgggcaacatggtgttactggtcccaggggt
ccacctggctggtcaggaccagaggggctgcagggagtccctggtgtgcctggaacaaga
ggagcgcatggtgacacaggccggtcactgcctgggcagaagggtgatgagggagatcag
gggatccaaggtcctcctggacgctttgagatcgtggagcccccaatcgagacataccaa
aaaggagaaaggggggagcaaggcagaaagggagattgtggagtcagtggtactgacgga
gcatgttcaccccctggagagaagggagagaagggagtcatcgggcttcctggacctcgg
ggatttcctggcccccagggtccacctggctaccccggatcacagggaccttctgggaac
gccggacttcctggcctgattggcaacctgggcccaaagggctacataggagacccagga
ccaaagggtagaccaacctttcagtacatcgatcaaaatggggatgcaggaagtattggc
agcactggacctccaggacaagtgggggagccaggggaccctgggtggattggcctccca
ggactaccagggcagtccctcagaggttcaccaggccggccaggtggcccagggttccgg
ggcgcaaagggggtgaagggggaccccgggaggtcctacacggtccccataccgggaccg
cctggcctaccggggaccccaggggccaagggacctcccggtcctccaggacccccaggg
tatgcctgcctcccaggtcagcctggagatgaaggagaccaaggcccacctggagctccg
ggggaaaaaggaaagagaggctgtgcaggggagtgtttttgtgaggaggacggtgcccca
ggccctgtgggccctcgggggcagccagggcagcccggggtgcctggcagagagggcaat
aggggagatcctggcccccgcggggacgcaggaggacccggacaccatggaaatccaggg
ttcccaggttttctggggtcaaaaggtcagaaaggggaaccctatgtggcacacattaaa
ggggtgaaaggtgaggtgggctttcccggtcccaggggcacccccggtctcaggggagaa
acaggagaagatggagctcctggtttcccaggggaccccggagcaccgggtgacggtcac
tcagggttgctgggtgacagagggtacccaggaccagatgggttcaaaggccccccagga
cccgccggaccgccaggccctgggattgcgggcccggtgggggtgccgggtccccaggga
gatccgggccccccggggaagacagggctccagggaacaaaaggcgtcaaaggtgacaca
ctgccatgtataaacccggaacccggcccaccaggaccgcagggtgaccctgggccagcc
ggtgatccgggcgttccaggccttccaggttttccgggacattccggttctgccggccct
aagggaaggagaggcgatcctgggtacccaggagtaaccacaggggtaagaggggttcga
ggtgatccaggacacccaggccgtcctgggcgagccttcccaaagggacacctgggcccc
aaacctttactgagggggaatttttttgggtgctggccacccctgtgctgtggcgtctcc
tcaggaccccgaggacagcccggcagagggggtcggaaaggggaccagggagagaggggg
gacccaggcctgacaggtccgcccagcccctgcccatgcccctgtaccgatgaacctggg
cccccaggccagcagggcccccccggggacaaaggctccccagtaggttatcctggagag
aaaggcatgctgggagaggtcggccagcctggcagagtcaggaaggggccttctggtgac
ttgggtcctccgggaccacctgggcaccctggacctcccggccccccaggaacctcgggg
gaccccggaaatctggggcaacgcggggcgaaaggtaaccgcggtccccctggcaacacc
ggatctcctttacctggaaggccaggccccatcggacggcaaggaaggagaggggagcca
ggcatcaatggccctgctgggccacttggacccacggggccgaaagggagaaaaggggaa
caaggccaacctgggaagcctggatccaggaacatgttcaaaggggtaaagggggaccag
tcgcggggaccacagggattcactggtcccagaggtcagaaaggggagccaggcagcagt
ggccagtccggccaggacgggttgccaggtttcgctgggtcgccaggtcaaccagggata
ccaggggctggcccacctggcctaccgggccatcccggggtacctggaggcctggggtgc
aatgggtcactcggtttcccgggagaccagggtgaccttgggcacagtggcccccccgga
ccccccggtccgtttgggtactccggaatgaaaggtgacatcggagactcagtgaacaat
ccggggccacctggactgcctggtcccccaggagatggaggaaaaccaggtggtgcgggt
ttgaagggtgacagaggggacccaggtttctctggcctcacagggaacagggggggccct
ggtcccaaagcatgccctggcccaccagggcctccaggaccacctggtttcccaggtctg
acaggtgcacaggggtatgccggcccagcagggccaccaggaccaagcggccctccgggg
cccccaggaaaccctggcccctcaggtgccccgggacctccaggtatcgccggtctggat
ggtctgagaggcgtgaagggagagagagggagcagaggcagtggtgagtggggccccagg
ggaccccaaggattccccggggaccagggacctacaggcagccctggacccaaaggcaca
tctctctggggtcccaaaggacagagggggcgtgaggggtcaccaggtgaaccagggctc
cctggtgatgctggtgttcctggcagagactgctatgatgtcacccatggaccaccagga
gagcctggtaatcctggtagacccgggcaaccagggccgccaggggttattgggctgccg
gggacggtgcttccatttcggggggaaatcggggatcccggtttaccaggacgcccaggt
ccgaagggggaggcgggtcccagaggactcccaggaagcccagggtttccagggcccccg
ggttccaaaggcgcaaaagggctgatgggaatgatgggtatcccagggcccgggggcatc
cccggccctgctggccccccaggatgcagaggagacaaagggatgactggagagccaggt
gccaaaggtcctcctggggatttggtgaactctgatccgttccccagacccggttcgctg
ggcccccctggtcctccggggcctcctggtttccctggcaacccgggaccaagcggagaa
gaaggtcctgcagggagaaagggtcagccagggtcacctggattaccaggtacagtcgga
accccgggaccagccggagttccgggagagcctggcattgacggagtgcgagggtttgcg
ggacctcaaggggcccctggtccgccaggtgagcagggacccccaggtacttccaggacc
tacagtcatggcttcctgttggtgatccacagccaatcagaagagattcctgtttgtcca
gtagacatggtcactatgtggaatggctacagtttactatacctggaggggcaggagaaa
gcgcacacacaggaccttggtcaggccgggtcatgtctgagggtcttcagcaccatgccg
ttctcgtattgcaacgtggcctcctgcgactacgccgggcggaacgacaagtcgtactgg
ctgtccaccacggcggcggcgcccgcggcgcccgcgtcgggcgccgagatccgccggcac
gtcagccgctgcgcggtgtgcgaggcccccgcccccgccgtggccgtgcacagccaggac
ggcgacacgcccccctgtcccccgcgctggaggagcctgtgggcggggtactccttcctc
atgcacacgggctcgggcgacgagggcggcgggcagtcgctgacctcggcgggcagctgc
ctgaaggacttccgcagccagcccttcattgagtgccagggcccgcgcggcacctgccac
tacttctccagcgcctacagcttctggctgacgcgcgtgggcgtggccgagcagtttagc
cccgcccccgccgccggcacgctgaaggaggcgtggcagcagcggcagaccaccagccgc
tgcaacgtctgcatgaaggagtga

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