Anguilla rostrata (American eel): 135258155
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Entry
135258155 CDS
T10705
Name
(RefSeq) vascular cell adhesion protein 1-like isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04514
Cell adhesion molecule (CAM) interaction
arot04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135258155
04518 Integrin signaling
135258155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arot04515
]
135258155
04090 CD molecules [BR:
arot04090
]
135258155
04091 Lectins [BR:
arot04091
]
135258155
Cell adhesion molecules [BR:
arot04515
]
Immunoglobulin superfamily
VCAM
135258155
CD molecules [BR:
arot04090
]
Proteins
135258155
Lectins [BR:
arot04091
]
I-type lectins (Siglecs)
135258155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
DUF2808
Psg1
C2-set_2
C1-set
ICAM1_3_5_D2
Motif
Other DBs
NCBI-GeneID:
135258155
NCBI-ProteinID:
XP_064197515
LinkDB
All DBs
Position
6:1998641..2004082
Genome browser
AA seq
585 aa
AA seq
DB search
MALWMLWIFVLPAAFSSDSYLEPNLSMTQLGDPLVLKCGTRLCEKPTFTWRALRDQPLMD
KSETNPSPTESQLVFHRVTLAHKTKIQCAAFCDDKKPFFGTARVNVYSFPADPEVSGYDH
LRHGEKSNLTCVVRDIYTADLLKVEWVQGETVLSTTEHEMSADDAVETHTSVYSYIPEFG
DGKKNITCRATLELEGVPVNQQTRQTTVNLTVQTPPRNTTVTVSPSWQVQEGQNVTISCR
TVSSPSPRYVLKKDGSDVEMESQDGTFWLQQVQLRDAGLYQLTVSNRLGSSTERLTLNVT
GPPRNTTVTVSPSWQVQEGQDVTISCRTVSSPPPRYVLKKDGSDEEMESHDGTFRLRQVQ
LRDAGLYQLNVSNRLGSSTERLTLNVTAPPRNTTVTVSPSWQVQEGQNVTISCRTVSSPP
PRYVLKKDGSDVEMESQDGTFWLQQVQLRDAGLYQLNVSNRLGSSTERLTLSVTAPPRNT
TVTVSPSWQVQEGQDVTVSYRTVRSPNSSFPSVPLPVQNPPPKDHIILLAVIGPTVAVVT
IAALVTHHLWKAKTRGVYELGKDVLLPVYVCRFNSSPGGLQCLQV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtggatgctttggatttttgtccttccagcagctttttcatcggattcctac
ctggagccaaacctttccatgactcaactcggcgaccctctcgtgctgaagtgcggcacg
aggctctgcgagaaaccgacgttcacgtggagggcgctgcgcgaccagccgctcatggac
aaatccgagaccaacccgtcaccaacggagtcgcaactcgtctttcaccgtgtgaccctc
gcacacaaaaccaagatacagtgcgctgcattttgcgatgataaaaagcctttcttcggt
acagcacgagtaaatgtgtattcttttcccgcggaccccgaggtgtcagggtacgaccac
ttacggcacggggagaagagcaacctcacctgcgttgtgcgggacatctacaccgcggat
ctgctgaaggtcgagtgggtccagggcgagacggttctcagcacgacggagcacgaaatg
tctgcggacgatgcagtggagacgcatacctccgtctactcctacatccccgagttcgga
gacgggaagaagaacatcacttgcagagccacgcttgagttggaaggtgtccctgtcaat
cagcaaacccggcagaccacggtgaatctgaccgtacaaacgcccccccggaacaccacg
gtaacggtgtccccgtcctggcaagtgcaggagggtcagaacgtcaccatctcctgccga
acggtcagctccccgtcgcctcgctacgtcctgaagaaagacggcagcgacgtcgagatg
gagtcccaggacggaacgttctggctacagcaggtccagctgcgtgacgccggtctctac
cagctcaccgtctccaaccggctgggctccagcaccgagcggctaacgctcaacgtgacg
gggcccccccgaaacaccacggtaacggtgtccccgtcctggcaagtgcaggagggtcag
gacgtcaccatctcctgccgaacggtcagctccccgcctcctcgctacgtcctgaagaaa
gacggcagcgacgaggagatggagtcccacgacggaacgttccggctacggcaggtccag
ctgcgtgacgccggtctctaccagctcaacgtctccaaccggctgggctccagcaccgag
cggctaacgctcaacgtgacggcgcccccccgaaacaccacggtaacggtgtccccatcc
tggcaagtgcaggagggtcagaacgtcaccatctcctgccgaacggtcagctccccgccg
cctcgctacgtcctgaagaaagacggcagcgacgtcgagatggagtcccaggacggaacg
ttctggctacagcaggtccagctgcgtgacgccggtctctaccagctcaacgtctccaac
cggctgggctccagcaccgagcggctaacgctcagtgtgacggcacccccccgaaacacc
acagtgacggtgtccccatcctggcaagtgcaggagggtcaggacgtcaccgtctcctac
cgaacggtccgctccccaaactcatcgttcccatctgtgccccttccagtgcagaacccg
ccccccaaggaccacatcatcctgctcgcggtcattggccctaccgtcgccgtggtaacc
atcgcagccttggtgacgcatcacttgtggaaggcgaagacgcgtggggtgtacgagctg
ggcaaggacgtcctgctccccgtgtatgtctgcaggtttaactccagtcctggagggctg
cagtgtctgcaggtttaa
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