Anguilla rostrata (American eel): 135259177
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Entry
135259177 CDS
T10705
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arot03009
]
135259177 (utp20)
Ribosome biogenesis [BR:
arot03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135259177 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Longin_2
Motif
Other DBs
NCBI-GeneID:
135259177
NCBI-ProteinID:
XP_064199288
LinkDB
All DBs
Position
7:16603677..16629171
Genome browser
AA seq
2785 aa
AA seq
DB search
MKTKSSYHKSENTFRFLTFSERLANVNIDVIHRIDRTGSYDEEVETYFFEGLTKWRDLNL
TDHFTAFLKEVIHKSQSFNLLVFHQQSIVESLKTHLRVRDSLAYQPLLDLVVQLARDLQV
DFYPHFQDFFLIITSMLETQDTELLEWAFTCLSYLYKYLWRLMVKDMSQMYCLYSTLLAH
KKDHIRNFAAESFAFLMRKVPDLDELFTCMFQDLADHSQKAEGVGQLLFQMCKGVRNMFH
SCAHKALPVAMRKLGPSGEGGVSLPWTAVGEALDHMAEAAADHIHKEHLLLLWECLENCL
VEVLQKLESGSEGGQVSEHMERLLNIYHTLAEHRGGAKVTRPESVCETLIKLIQAPQLSS
SCQQLLLQVTSSLLLGENVSMPDVLIQRLLTKIFRIGRDQDIILPFAKEMFGMKQFEQLL
LPSLLQYLEHMFGSEDPVTRQLALELLTSLILAKAEPPSDGSLAFEKYPLVFTGQLPMMS
DSTEAKRPVSVPLYVLSLLDRPKEEAFGDLSHLWAALVVLPHIRPLESGSVIPMITALIG
RLLDNVEAGVLGKGGLFVARQALSTLLSFKESAEVLALVPVEWVRSIIQKFPTDLSALLL
GDLYFTRLSLNGCSAHLSHDAMLELHQMLHANLSSNVSKIRLLTLRILTHFEADIPKQTE
GEESVEMQSVFRLCLQAELVPATLHDYREKLLHLRKLRHDLVQPALPRGPFQQVPLRYLI
GMLFINFSPLWDPVIELVVTHANGMENKDFWKVFHEHLEMVAVLAEKELHEDDDDDDDED
EEKATQTAAPDIDVVQSGDLGVLFLEQLDQASSPNDRTDFTNFRFLLWKAMVKFPDRVEP
RSRELSPLLLRFISKEFYPADLMVAPTQSLRKMGGTSTETEKSGVGELEPREEEEEKEPA
EVTKQAGRKTPRRAAAKQLIAHLKVFSKFTNPRSLYLEPNLHQLYTQLLCHQDQEIQKMA
LECELTYKHPHVLPYKENLQRLLDDKHFKEEIVHFNISEEGSAVEASHRPDLIPVLMRIL
YGRMRSRTGSKSQGKASTTTRFSIVLRFLAGCLPEELGMFIDLLLEPVHQHSHGTCVEAV
QRAVEQTDLSAVLPLGRQHSLFNLVDVVIQKLGHLIHQYLPKVLQILLCVTASVCTILDQ
RDQLKAGCISPLKNLRRLGILRINDFFDGFESYSFSADELDAVFQAVVWPQVCRLPTESP
YAPTPLLKLIRVWSRNARYFPLLGKQRPGHLEYDVLLNVFALLAAKNVSPATVAMVMDIA
ESLVTTPDFLPTEREAELTVNGVVVPEPGDGCEIPADALTLGSKLLLPHISTLLQYLGGV
VRNSDRIKKKKFRAQVNKELNILSKISRFVSDKEQSSTLISLLLPHLHRPQTAQETLLDI
LETVQNLLRRCANPTSFLRPLSRLFSSIHSKLPRQALCVTFQTLSDLDGGLKYITDVAAQ
LNAFDSRHLDEIHFDVRLTAFQGATQRIREMEALDMNYLHTIMHNCFHSFEIGDMSLADS
ANSCLAAIVTRLASVEHTEEEYREIVQRTLLDAVRRGLGSKTETVQQDYTTVLSCLTRAF
PSRPEFRDLVQLTDYNDPESDFFEHMKHIQIHRRGRALRKLAKQLTEGTVVMSPKSLQNY
IMPYAMTALFSEKMLKHENMTSASVEVIGSVCRCLTWSRYLYYLKYFVHVLQTGQADQKL
AVSLLVTVLEAFHFDRETLGRELEAMKTRETETAMEEEGEEEEEAVEMVESDGEEAGETV
DKEPVPHATERPDESKSASLEEAVPSGEAVGKVPSGLPQSREELESLITSIHQTVTGSVL
PKLQKCLTTKVKRDEEHKLVKSKEVKEEEVVRVPIAFAMVRLMQTLPQEVLEANLPGILL
KVCVLLRNRFQEIRDVARNTLIRIIETLGCRYLQYLLKEMKSVLVKGYQVHVLTFTVYQL
LSALCPSMKSGDLDPCMDLLLEIFNNELFGYVAEEKEVKGIISKVMEARSSKSMDSYELL
AQFAGREHVTQLILPLKEILETTASLKVSRRVHAVLRRIVSGLLLNKSMDNRSILLLSHG
LVSESLPLLTQKNKEKGSVKPPPDPRLPPASCLLLPPTPKRGGNKAPVSSRTNMHILVDT
GLRLLHMSLKRSKVNSSDASVLEMLDPFVSLLLDCLFSMHVKVITEALQSLSWILKFPLP
AVESSAEKLTMQLFLLLKDYAKAGAARGENFNLVLNCFKSITILVKSMKTHQISDKQLQV
LLGYAEEDIYDQSRQATAFGLLKAILSRKLVVPEMEDVLKKVAKLSITGQNGQIRVQCRQ
IYLKYLLDYPLGKKLRAHLDFIVAQLSYEYDTGRESALEMMAYIFQTFPQDHLQQYCGLF
FVPLALVMVNDDSSCCKKMAALAIKTLLSKLSLDHQNTMFTLVSTWLSNEKVSHRRLGAQ
VCGLFVEVQGEGFACRLDTLLPLIEKEMHPSNYEDIEEEEEEKAVDRLLFSFLTLITKLI
KECGFLQLSKPAETLTQIWNHTNAHLRHPHSWVWLTASQVFGQMFAAHKPEELVAQWRGL
QGDITANVPVATKYLVTDLDKKMRELVLSFCSQLQSKFLDTSLGEQVIKNLLFVAKVIYL
ISPESESTETLEQVDEEEDEQKEAEDDEKEEENERPPSLLWVMKKLSVLAKREAADTPKV
PLKRTCVFKFLGAMAVHLGKDHLQPYLTTIIAPLFRELDSTYADQDPTLKNLSQELMDLL
KKQVGLESFSLAFAAVQKEATQRRAMRKRHKAMQAVANPDIAAKKKLKKHKNKIEAKKRK
IEFLRPGYKAKKQRSHGLKDLAMVQ
NT seq
8358 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaatcgtcttaccataaatctgaaaacaccttcaggtttcttacgttctct
gaacggcttgccaatgtgaatatcgatgttatccatcgcatcgacagaacgggcagttac
gatgaagaggtagaaacatatttttttgaaggactgacgaaatggagggatttgaatttg
acagaccattttaccgcctttttgaaagaagtgatccacaagagtcagtccttcaacctg
ctcgtgttccaccagcagtccatagtagagagtctcaagacccacctcagggtgcgggac
agcctggcttaccagcccctgctggacctggtggtgcagctggcccgggatctccaggtc
gatttctaccctcacttccaggacttcttcctcatcatcacctccatgctggagacccag
gacacagagctgctggagtgggccttcacctgcctctcgtacttgtacaagtacctgtgg
aggcttatggtcaaggacatgagtcagatgtactgtttatacagcactctcctggctcac
aagaaagaccacatacgtaactttgctgcagaaagttttgcatttttgatgaggaaggtg
cctgatctggatgaactcttcacctgcatgttccaggacctggctgatcactcccaaaaa
gcagaaggtgtgggacagcttctattccagatgtgcaaaggggtccgcaacatgttccac
tcatgcgcccacaaggctcttccagtggccatgcggaagctgggcccttcaggtgaaggt
ggcgtctctctgccctggacagctgttggagaagctctggatcacatggcagaagcagca
gccgatcatatccacaaggaacacttgctgttgctgtgggagtgtctagagaactgcttg
gtggaggtgctgcagaagcttgagtccggaagcgagggcggccaggtttctgaacacatg
gagaggctcctgaacatctaccacacactggcggagcacagaggcggagccaaggtcacc
cggccagagtctgtgtgtgagaccttgatcaagctgatccaggccccccagctttcatca
tcctgtcaacagttactgctccaggtgacatcatcactgctgcttggagagaacgtgtct
atgcctgatgttctgattcagaggctgcttaccaagatcttcagaattggaagagaccag
gacatcatcctgccctttgcgaaggagatgtttggcatgaagcagtttgaacagctcctg
ctgcccagtctgttgcagtatctggagcacatgtttgggagtgaggaccctgtgacccgc
caactggccctggaactcctcaccagtctgatcctggccaaagctgaaccgccctccgac
ggctccctggcctttgagaagtaccccttggtcttcaccggccaactccccatgatgtct
gactctacagaggctaaacggcctgtgtctgtgcctctgtatgtactgtcgcttctcgac
cgcccaaaggaggaggccttcggggacctctctcacctctgggcagccctagtggttctg
ccgcacatcagacctctggagtcaggcagcgttattcccatgataacggcgctcatcggt
cgcctgttagacaacgtggaggctggagttttgggaaaggggggcctctttgtggccaga
caggccctcagcaccctgctcagcttcaaagagtctgctgaggttctggccctggttccg
gtggagtgggtccggagtattatccagaagttccccacagacctgtctgctctgctgctg
ggtgacctatacttcacaagactttcactgaatggttgctctgcccacctctcccatgat
gcaatgctggagttgcaccagatgctgcatgctaacctctcctccaatgtctctaagatt
cgactcctaactctgagaatactgactcactttgaggcggacattcccaaacaaactgag
ggtgaggagagtgtggagatgcagtcggtgttcaggctgtgtctgcaggcggagctcgtt
ccagccacgctgcacgactacagggagaagctgctgcacctgagaaagctgcgacacgac
ctggtgcagcctgccctgccccgggggcccttccagcaggtgcccctacgttacctgatt
ggaatgctgttcataaatttcagccccctctgggacccagttattgagcttgtggtgacc
cacgcaaatggaatggaaaataaagacttctggaaggtcttccatgagcaccttgaaatg
gtggctgttctagcagagaaggagcttcatgaggatgatgatgatgatgatgatgaagac
gaagagaaagcaacgcagactgccgctcctgacatagacgtggtccagagcggggacttg
ggggttctgttcctggagcaactggaccaggcctccagccccaacgaccgcacagacttc
acaaacttccgcttcctgctgtggaaggccatggtcaaatttcccgaccgggtggaaccg
cgcagccgcgaactgagcccgctgctcctgcgcttcatcagtaaggagttctacccagcg
gacctgatggtggctcccacccagagccttagaaagatgggtggcacctccacagaaacc
gagaagtctggggtgggagagctggaacccagggaggaagaggaggagaaggagccagca
gaggtgaccaaacaggctgggagaaagacaccaaggagagcagcagccaagcaacttatt
gctcacttgaaagtgttctccaaattcaccaacccccgttctctgtatctggaacccaac
ctgcatcagctatacacacagttgctgtgccatcaggaccaggagatccagaagatggca
ctggaatgtgagctgacttacaagcacccccacgtcctcccctacaaggaaaatttacag
cggcttctggatgataagcactttaaagaggagatcgtccacttcaacatttctgaggaa
gggtccgctgtggaagcttcacacagacccgatctcatccctgtgctaatgaggatccta
tacgggcgcatgcgcagccgaactggcagtaagtctcagggcaaggccagcaccaccacc
cgcttctccatagtgctgcgctttctggctggctgtctgcctgaggagctcggcatgttc
atcgacctgctgctggagcccgtccatcagcacagtcacggtacgtgtgtggaggcggtc
cagcgggcggtggagcagacggacctctctgcagttcttcctctggggcgacagcacagt
ctgtttaacctcgtggacgtggtcatccaaaagctgggtcacctgatccaccagtacctg
ccaaaggtgctgcagatcctgctgtgtgtcaccgcctcagtctgcaccatcctggatcag
agagaccagttgaaagcaggctgcatcagtcctctgaagaacctgaggcgcctgggaatc
ctgcggatcaacgacttcttcgacggctttgagtcgtacagcttcagcgctgatgagctg
gatgccgtgtttcaggctgtggtctggcctcaggtatgccgcctccccacagagagcccc
tacgcccccacccccctgctcaaactgatccgcgtgtggagcaggaatgccaggtatttt
cctctgctgggaaagcagaggcctggccacctggagtatgacgtgctgctcaacgtcttc
gccctgctcgccgccaaaaatgtttccccggcaaccgttgccatggtgatggacatcgca
gaaagcctggtgaccactccggacttcctgcccacggagagggaggccgagctgaccgta
aacggcgttgtggtcccagagccgggcgacgggtgtgaaatccctgcagatgctctgacc
ctgggttcaaagctcctcctcccacacatctccacgctgctgcagtacctcggcggggtt
gtccgcaactccgaccgtatcaagaaaaagaagttcagagctcaagtgaacaaggagctg
aacatcctctcaaagatcagcagatttgtgagtgataaggagcagagctccacgctgatc
agcctcctgctgccacacctccacagaccccaaactgcacaggagacgctgctcgacatc
ctggagacggttcagaacctgcttcgccgctgcgcgaaccccacctccttcctcaggccc
ttgagccgactcttctccagcatccacagcaagctgcctcggcaggccctgtgcgtcacc
tttcagactttatcagacctggacggcggactgaagtacatcacggatgtggccgctcag
ctcaacgccttcgacagccgccacctggatgagatccacttcgacgtgcgtctgacggcc
ttccagggcgcaacgcagcgcatcagagagatggaggccctggacatgaactacctgcac
accatcatgcacaactgcttccactcttttgagattggggacatgtccttggctgatagt
gccaactcatgcctggcagctatcgtcacacggctggcgtcagtggagcacaccgaggag
gagtacagagaaatcgtacagcgcaccttgctggacgcagtacggagaggcctcggcagc
aaaacggagaccgtccagcaggactacaccacggtcctctcctgtctgactcgggccttc
ccctctcgtccggagttccgagacctggtgcagctcactgactataacgaccctgagtct
gacttctttgagcacatgaagcacatccagatccacagaagagggcgtgccctgcggaag
ttggccaagcagctgactgagggaacggttgtgatgtccccaaagtcgctgcagaactac
attatgccttacgccatgacagctctgttcagcgagaagatgctgaagcatgaaaatatg
acctcggcctcagtggaggtgattgggtccgtgtgcaggtgtctcacctggtccaggtac
ctgtattacctcaagtactttgtgcacgtgctacagactggacaggctgaccagaaactg
gctgtcagcctgctggtgacggtgctggaggcgttccactttgaccgggaaaccctgggg
agagagctggaggcgatgaagactcgagagaccgagactgccatggaagaggaaggcgag
gaagaggaggaagccgtggagatggtggagagtgacggtgaagaggctggagaaacggtg
gacaaagagccggtgccgcacgccacggagaggcctgacgaatccaaatcggcctcgctg
gaggaggcggtgccttcgggcgaggcagtggggaaggttcccagtggtcttcctcagagc
agagaggaactggagtctctgatcacttccatccatcaaaccgtcactgggagcgttctg
cccaaacttcagaagtgcctcactactaaggtaaaaagggatgaggagcacaagctggtg
aagtccaaggaagtgaaggaggaagaggtggtgagggttcccattgccttcgccatggtc
cgcctcatgcagactcttccgcaggaggtcctggaggccaaccttccgggtatcctgttg
aaagtgtgtgttctcctgaggaatcggttccaggagattcgagatgtggcacggaacacc
ctgatcagaatcatagagacgctgggctgtcgctacttgcagtacctgctgaaggagatg
aagagtgtcctggtcaagggataccaggtccacgtgttgaccttcactgtctaccagctg
ctgtctgccctgtgcccctccatgaaaagcggagacctggacccctgtatggacctgctg
ctggagatcttcaacaacgagttgtttggctacgttgccgaggagaaggaagtgaaagga
atcatttccaaggtcatggaagcgcgaagcagcaaaagtatggactcgtacgagctgttg
gctcagtttgccgggcgggagcatgtcacccaactcatcctgccactcaaagagattctg
gagaccacagccagtctgaaggtttctcggagggtccatgcggtgctgcggcgaattgtg
tctggacttctgctcaacaagagtatggacaatcggtccattctgctgctcagccacggg
ctggtcagcgagagccttccgcttctcacccagaagaacaaggagaaggggtctgtgaag
ccccccccggacccccggctgcccccggccagctgcctcctcctgccaccgacgcctaaa
aggggcgggaataaagcgccagtcagcagccgcaccaacatgcacatcctggtggacact
gggctcaggctgttgcacatgagtctgaagaggtcaaaggttaattcgtcagatgcgtct
gttctggagatgctggacccgtttgtctcactactgttagactgtctcttctctatgcac
gtgaaggtaatcactgaggctctgcagtctctgtcctggattctgaagtttcctcttcct
gcggtggagagcagcgctgagaagctcacaatgcagctcttcctgctgctcaaagactat
gccaaggccggagctgctcgcggagaaaacttcaaccttgtcctcaactgcttcaagtct
atcaccatcctggtgaagagtatgaaaactcaccagatctctgacaagcagttgcaagtt
ctgctggggtacgctgaggaagacatctacgaccagtcccgccaagccacagccttcggc
ctgctcaaggctatattgtcgaggaaactggtggttccagaaatggaggatgtgttgaag
aaagtggccaagctgtcaatcactggtcaaaatgggcagatcagggtccagtgcagacag
atttaccttaagtacctcctggattatcccctggggaaaaagttgagggcacacctggac
ttcatagttgcacagctcagttatgaatatgacactggcagagagtcggctcttgagatg
atggcctacattttccagactttccctcaggatcatctgcagcagtactgtgggctgttc
tttgtcccgctggctctggtcatggtgaatgatgactcgtcgtgctgtaagaaaatggcg
gctctggcaatcaaaacgctgttgagcaaactgagcttggaccaccagaataccatgttc
accctggtcagcacctggctatccaatgagaaggtgtcccaccgtcggctgggagctcag
gtgtgcgggctttttgtggaagtgcagggggaggggtttgcctgtcgccttgacaccctg
ctgcccctgattgagaaagaaatgcacccgtccaactacgaagatatagaggaggaggaa
gaggaaaaagccgttgacagactgctcttcagcttcctgacgctgatcaccaaactcatc
aaggagtgtggcttcctccagctcagtaaaccagcggagacacttacccaaatctggaac
cacacaaacgctcacctgcggcaccctcattcctgggtgtggctgacggcctcccaggtg
ttcggccagatgttcgccgcccacaagccagaggagctggtcgcccagtggaggggtctg
cagggtgacatcacggcaaacgtgccagtggccaccaagtacctagtcactgacctggac
aagaaaatgagagagctggtcttatcattctgcagtcagcttcaatccaagttcctggat
acatctctgggcgagcaggtgataaagaacctgctgtttgtggccaaagtgatttacctg
atatcaccggagtcagaatcaacagagaccctagagcaggttgatgaagaggaggatgaa
cagaaggaggctgaggacgatgagaaggaggaagagaatgaacgacctccatccttactg
tgggtgatgaagaagctgtctgtactggcgaagagggaggcagcagatacgcccaaagtg
ccactgaagaggacgtgtgtgtttaagttcctgggtgccatggctgtgcatctggggaaa
gaccacctccaaccatacctgaccaccatcattgccccactcttcagggagctggacagc
acctatgctgatcaggaccccactctgaagaacctgtcccaggagctgatggacttactg
aagaagcaggtgggactagagagcttctcactggcttttgctgccgtgcagaaggaggcc
acacagaggagagccatgcgcaagagacacaaggccatgcaggctgttgctaatcctgac
atcgcagccaaaaagaaattgaagaagcataaaaacaaaattgaagccaagaagagaaag
atcgaatttctgcgtccgggatacaaagccaaaaaacagcgtagccatggcctgaaggac
ctggccatggtgcagtga
DBGET
integrated database retrieval system
