Anguilla rostrata (American eel): 135259281
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Entry
135259281 CDS
T10705
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135259281 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135259281 (dhx15)
03009 Ribosome biogenesis [BR:
arot03009
]
135259281 (dhx15)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135259281 (dhx15)
Spliceosome [BR:
arot03041
]
Complex A
U2 snRNP components
U2 related factors
135259281 (dhx15)
Complex B
135259281 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135259281 (dhx15)
Ribosome biogenesis [BR:
arot03009
]
Eukaryotic type
90S particles
Helicases
135259281 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_25
Cas3-like_C_2
nSTAND3
Atrophin-1
SRP54
Flavi_DEAD
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-GeneID:
135259281
NCBI-ProteinID:
XP_064199545
LinkDB
All DBs
Position
7
Genome browser
AA seq
768 aa
AA seq
DB search
MSKRHRLDLGDDYSSGKKRISSDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRDREKDAKA
PSISLNPMMAGGGGGLLPLKQTAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFG
DILNRHQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVAD
EMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTL
ATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEP
ERDYLEAAIRTVIQIHMCEEEEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIP
LYSTLPPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY
NPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNL
GSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPL
DPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTL
LNVYHAFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYI
NIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYI
RTCTDIKPEWLIKVAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagacatcggctggatttaggagacgactattcatctggtaaaaagagaata
tcatctgacgggaaagatcgcgaccgggacagagaccgcgatgaccgttcaaaggaccgg
gaccgcgacagagaccgggaccgggaccgcgaccgcgacagagagaaggacgcgaaggcc
ccgagcatctccctcaaccccatgatggcgggcggcggcggcgggctgctcccgctcaag
cagaccgccatgcaacagcagatcaaccccttcaccaacctgccgcacacgccgcgctac
tacgagatcctgaagaagcgcctgcagctgcccgtgtgggagtacaaggagcgcttcggc
gacatcctcaaccgccaccagagcttcgtgctcgtcggggagacgggctccggcaagacc
acgcagatcccccagtggtgcgtggacatggtgagggcgttgccaggcccaaagagaggc
gtggcctgtacccagcccagaagggtggcggccatgagcgtggcgcagagggtggcggac
gagatggacgtgatgctggggcaggaggtgggctactccatccgattcgaggactgcagc
agcgccaagaccatactgaagtacatgacggacggcatgctgctccgggaggccatgaac
gaccccctgctggagcgctacggcgtgatcatcctggacgaggcccacgagcgcacgctg
gccaccgacatcctcatgggggtcctgaaggaggtggtccgccagaggtcggacctgaag
gtgatcgtcatgagcgccacgctagacgccggaaagttccaggtgtacttcgacagctgc
cccctgctgaccatccccgggcgcacgcaccccgtggagatcttctacacgcccgagccc
gagagggactacctggaggccgccatccgcaccgtcatccagatccacatgtgcgaggag
gaggagggcgacgtcctgctcttcctcaccggccaggaggaaatcgacgaagcctgcaag
cggataaagcgcgagatcgacgacctggggcccgaggtgggggacatcaaaatcatcccg
ctctactccaccctgcccccccagcagcagcagaggatcttcgagccgcctcccccccgg
aagcccagcggggcgataggcaggaaggttgtggtgtcgacaaacatcgccgagacatcc
ctgacaatcgacggcgtggtgtttgtaattgatcccggatttgccaagcaaaaggtgtac
aatccccgcatcagggtggagtccctgctggtgacggccatcagcaaagcctccgcccag
cagagggcggggcgcgccgggaggacacgcccagggaagtgtttccgcctctacacagag
aaggcctacaagaccgagatgcaggacaacacgtacccggagatcctcaggtctaacttg
ggatcggtggtcctgcagctgaagaagctgggcatcgatgacctggtgcacttcgacttc
atggaccccccagctccggagacgctgatgcgggccctggagctgctcaactacctggcg
gccctgaacgacgacggcgacctgacggagctgggctccatgatggccgagttccccctg
gacccgcagctcgccaagatggtgatcgccagctgcgagttcaactgctccaacgagatc
ctgtccatcaccgccatgctctcagtcccacagtgctttgttcgcccgacggaggccaag
aaggcggctgacgagtccaagatgaggttcgcacacatagacggagatcacctgaccctg
ctcaacgtctaccacgcgttcaaacagaaccacgagtcggttcagtggtgctacgacaat
ttcgtcaactaccggtcgctgatgtcggccgacaacgttcgccagcagctgtcccggatc
atggacaggttcaacctgccccgccggagcacggagttcaccagccgcgactactacatc
aacatccgccgcgccctggtcacgggcttcttcatgcaggtggcccacctggagcgcacg
ggacattacctgacagtgaaggacaaccaggttgtccagctccacccctccacagtcctg
gaccacaagcccgagtgggtcctctacaacgagttcgtcctcaccaccaagaactacatc
cgcacgtgcaccgacatcaaaccagagtggctgatcaaagttgctccccagtattacgag
atgggcaacttcccccagtgcgaggccaagaggcagctggagcgcatcgtggccaagctc
cagaccaaggagtactctcagtactaa
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