KEGG   Anguilla rostrata (American eel): 135259314
Entry
135259314         CDS       T10705                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
arot  Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:arot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arot03041]
    135259314 (smu1a)
Spliceosome [BR:arot03041]
 Complex B
  Other components
   Complex B specific factors
    135259314 (smu1a)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_Gbeta ANAPC4_WD40 LisH_TPL Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_ACSF4 WDR90_beta-prop_4th Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_BBS7 Beta-prop_IP5PC_F Beta-prop_RSE1_2nd VPS8_N LisH LisH_PAC1 DUF7165 PROPPIN Beta-prop_NOL10_N LisH_WDR26 zf_topless PA14
Other DBs
NCBI-GeneID: 135259314
NCBI-ProteinID: XP_064199613
LinkDB
Position
7:19870937..19880401
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRVAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFCKDSSQLLSASFDQTIRIHGLKSGKSLKEFRGHSSFVNEAAFTPD
GHYVISASSDGTVKVWNVKTTECSNTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaagtggaatcggcagacgtgatccgtctgataatgcagtacctgaaggag
aacaacctgcaccgcaccctggccaccctgcaggaagagaccaccgtgtccctcaacacg
gtggacagtatcgagagctttgtggccgacataaacagtgggcactgggacacagtcctg
caagccatccaatccctcaagctcccggacaagactctcattgatctctatgagcaggtg
gttctggagctgatcgagctgcgagagttgggggcggcccgttccctgctgaggcagacc
gaccccatgatcatgctgaagcagacccagcccgagaggtacatccacctggagaacctg
ctggccaggtcctatttcgacccgcgagaggcctatccagatggcagtagtaaggagaag
cggagggtagccattgcccaggccctggcaggggaagtgagtgtggtcccgccttctcgt
cttatggctctgctcggtcagtccctgaaatggcagcagcaccagggcctgctcccgcca
gggatgaccatcgatctgttcaggggcaaagctgctgtgaaagacgtggaggaggagcgt
ttccccacccagctcagccgacacattaagtttgggcagaagtcccacgttgagtgcgcc
cgcttctctcccgacggccagtacctggtcaccggctccgtggatggcttcattgaggtg
tggaatttcaccaccggaaaaatccgaaaggatctgaagtaccaggcgcaggataacttc
atgatgatggacgacgcggtgctgtgcatgtgcttcagccgggacaccgagatgctggcc
acaggagcacaggacggcaaaataaaggtgtggaagatccagagtggccagtgtctgcgg
aggtttgagcgcgctcacagcaagggcgtcacctgcctcagcttctgcaaggacagcagt
cagctcctgagcgcctccttcgaccagaccatcaggatccatgggctgaaatcaggaaag
tctctgaaggagtttcggggtcactcctcgtttgtaaatgaagcggcattcacgccggat
ggacactacgtcatcagcgcgtcgtccgacggcactgtcaaggtctggaacgttaagact
acagagtgctccaacacatttaagtcccttggcacctcagccggcacggacatcaccgtc
aacaacgtgatcctcctgcccaagaaccctgaacattttgtggtttgcaaccgatccaac
actgtggtcatcatgaacatgcaaggccagatcgtgagaagcttcagctctggtaagaga
gaggggggagactttgtgtgctgcactctgtcgcctcgtggagagtggatctactgcgtg
ggggaggactttgtgctctactgcttcagcaccgtcaccggcaaactggagagaaccctg
acggtccatgagaaggatgtgatcggcatcgcccaccaccctcaccagaacctgatcagc
acgtacagcgaggacggcctgctgaagctgtggaagccgtag

DBGET integrated database retrieval system