Anguilla rostrata (American eel): 135259599
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Entry
135259599 CDS
T10705
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135259599 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arot03021
]
135259599 (polr1a)
Enzymes [BR:
arot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135259599 (polr1a)
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135259599 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
PPP4R2
TssR_VWA
Motif
Other DBs
NCBI-GeneID:
135259599
NCBI-ProteinID:
XP_064200211
LinkDB
All DBs
Position
7:complement(35581946..35628371)
Genome browser
AA seq
1699 aa
AA seq
DB search
MFLGKDVPWRRLEGMSFGMYSAEEIRKLSVKTITNDRFLDNVGNPATNGLYDLALGPLDA
KEVCATCMQDFNNCPGHLGHIELPLPVYNPLFFDKLYLLVRGSCLSCHMLTCPRAAVHLL
LHQLRVLDVGALQAVDDLEAELNRFLEGNVKASGAEIQEVLEDFATGVIREQRDKGCGSP
VKHICERKSNLITKFWRVHMVSRKCSVCKTGRTLVRKEHNSKLIAMLPAAMCKGNRKKGE
TEVIEDSQLGKRGYLTPSIAKEHVAKLWEKEGFFLNYLFSGMEACNKTGFSPDMFFLELL
VVPPSRYRPINRLGDQMFTNGQTVNMQAVMKDCSIIRKLLVLMAGEKARSLSNGGEELEE
EATNSKTDQDFLVGLPGQTITDKFYNVWIRLQSHVNIVFDSDMDKLMTEKFPGIRQVLEK
KDGLFRKHMMGKRVDYAARSVICPDMYIGINEIGIPMVFATKLTYPQPVTPWNVKELRQA
VINGPNVHPGASMVINEDGSSTVLSADNHTQREAIAKQLLTPSQGPQKMPMKIVNRHIKN
GDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELG
RAEAYTLVSTYQQYLVPKDGKPLAGLIQDHMVSGTSMTLRGCFFTRDQYMELVYRGLTDK
RGRVKLLRPALLKPHPIWTGKQVVSTLLLNVIPENHLPLNLTGKAKIPSKAWVKYPPRPI
PGYQPDSMCESQVIIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSSHLLSCLARL
FTAYLQLYRGFTLGVEDILVKPRANKKRSKIIAESTKCGAQALRSAFNIPPTASESEARE
RWQDAHLNPDQRNFNTVDLKFKEVASLVNNDINKVCMPQGLHRRFPENNLQLMVQSGAKG
STVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDVSPRSGGFVSGRFLTGIKPPEY
FFHCMAGREGLVDTAVKTSRSGYLQRCIVKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGL
DIPKTQFLQPRQLPFIQENYEVIRKSNCLDEVLGRMDSEAAASHFRALRKWKARREAAAC
REGPFLLFSQKKLSKQKCQSEQGELSAGRDSATLQLVERWRSLDNSKRSKYTKKTLHCPE
PCLAHLRPDISFGSVSETFDAIVECYLSKVVSEEYSKELETDRLRQLLQLKWQRALCDPG
EAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMIASSSIKTPMMRVPV
LNTRRALKKVQTLRKKLTRVCLAEVLQRLDVQEILRVDGKQQKSRVFKLTFHFLPPERYK
DDNLLSPQQILHYMETRFFRILLEAIKKRSAKLASINRVDMRKASQKDTDRDTGDSQGSL
GNGDGEEEAGEGGEIVDGEADEGDADATDTKRREKQEEEVDYESEEGEDEDERDDLAEET
EETPPKDMEEDKEPEEDYTAPPGFADGGKPDETHSQDLLRVNAVLDISSAIETYTYDCKN
GLWCEVTLILPVSKVHFDLTSLVGTQAQSAVVHETKGITRCLLSEVTTPQGTKELMLNTE
GINLQELFRYSEILDLNRLYSNEIHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPRHL
SLVADYMTFEGMYKPLNRFAIQSNSSPLQQMTFETSYKFLKQATMLGSHDSLQSPSARLV
VGKVVKGGTGLFDLKQPLQ
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttggcaaagacgtaccatggaggcgactcgaaggcatgtcgtttggcatgtat
tcagcggaagaaatcaggaaattgagtgtgaagacgattaccaatgacagatttctggat
aatgtgggcaaccctgctaccaatggcctgtatgacctggcacttgggcctctggatgct
aaggaagtgtgtgcaacttgcatgcaggatttcaacaactgtccaggacacctggggcac
atcgagctgcccctgcctgtctacaaccccctgttttttgacaaattgtacctgttggtt
cgggggtcttgcctgagctgccacatgttgacgtgcccaagggcagctgtccacctgctt
cttcatcagcttagggtgctggatgtgggggcgctgcaggctgtggatgacctggaggcc
gaactaaaccggttcctggagggtaatgtcaaggccagtggggctgagatccaagaagtg
ctggaggactttgctacaggggtcatcagagagcagagagacaaaggctgtggttcacct
gtcaaacacatctgtgaaagaaagagcaacctcattacaaagttctggagggtgcacatg
gtctcccgaaaatgttctgtctgcaaaactggccgaactctagtacgcaaagagcacaac
agcaagctgattgcgatgctgcctgcagctatgtgtaaagggaacaggaaaaagggcgaa
acggaagtaatcgaagattcacagctggggaaaaggggctacctgactcccagcatcgcc
aaggagcatgtggctaaactgtgggagaaggaaggtttcttcctgaattacttgttctca
gggatggaagcttgcaataagactggcttcagccccgatatgttctttctggaactgctt
gtggttcctccctctaggtaccggcccataaaccgcctgggggaccagatgttcaccaac
ggtcagacggtcaacatgcaggctgtaatgaaggactgcagcatcatcaggaagctgctg
gttctcatggcaggtgagaaggcacggtcgctcagcaacggcggagaggagctggaggag
gaagcaactaatagcaagactgaccaggacttcctggttggccttccaggccagacaatc
acggacaagttctacaatgtctggatccgcctgcagagtcacgtcaacattgttttcgac
agtgacatggacaagttgatgacagaaaaattccctgggattcgtcaggtcctggaaaag
aaggatggacttttccggaagcacatgatggggaaacgtgtagactatgcagcgcggtca
gtcatctgccctgacatgtacattggaatcaatgagattggaataccaatggtgtttgcc
acaaagctgacgtacccccagccggttacgccgtggaacgtgaaggagcttcggcaggca
gtgatcaacgggcccaacgtgcacccgggcgcctccatggtcataaacgaggacggctcg
agcaccgtgctcagcgctgacaaccacacccagcgggaggctatcgccaagcagctgctc
acaccctcccagggcccgcagaaaatgcccatgaaaatcgtgaaccggcacattaaaaat
ggagatgtgctactcctgaatcgacagcccacactccatcggccgtccatccaggcacac
tgtgctcgcatcctgcccggggagaaggtcctgcgtctgcactacgccaattgcaaggcc
tacaatgccgactttgatggggacgagatgaacgcgcactttccccagagtgagctgggc
cgagctgaggcatacacgctcgtcagcacctaccagcaatacttggtgcctaaggatggg
aaacccttggctgggttgatccaggatcacatggtttctggtaccagcatgaccctgagg
ggctgcttcttcacccgtgaccagtacatggagctggtctaccgtggcctcactgacaaa
aggggcagggtgaagctgctccggcctgccctgctcaagccccatccaatctggacaggc
aaacaggtggtgtcaacgttgctgctgaacgtgattccagaaaaccacctccccctgaac
ctgacgggcaaagccaagatccccagtaaagcctgggtaaaatacccaccccgccccatc
ccagggtaccagcccgattccatgtgtgagtcccaggttattatacgtcagggcgagctg
ctggtgggggtgctggacaaggcccactatggcagctcagcctatgggctggtgcactgc
tgctatgagctttatggtggagagaccagcagccacctgctgagctgcttggcacgcctc
ttcaccgcctatctgcagctttaccgtggattcaccttgggtgtggaggacattttggtc
aaacccagagcaaacaagaaaaggagtaagatcattgcagagtcaaccaagtgtggagca
caggctctgcgatcggccttcaatattccccctaccgcctcagagagtgaggcacgtgag
cggtggcaggacgcccaccttaaccccgaccagcgcaatttcaacactgtggacctcaaa
ttcaaggaagtggccagccttgtcaacaatgatatcaacaaggtgtgtatgccacaggga
ctgcaccgccgctttccagagaacaacctccagctgatggtgcagtccggcgccaagggc
tccaccgtcaacaccatgcagatctcctgcctgctgggtcagattgaattggagggccgc
cgcccaccactgatgccctctgggaagtccctaccctgtttccagccctatgatgtgtca
cctcggtcaggggggtttgtctctggccggtttttgacaggcatcaaacctccggagtac
tttttccattgcatggctggtcgggagggactggtggatactgctgtgaaaacaagtcga
tcagggtatttgcaaaggtgtatcgttaagcacctggagggcttggtggtgcagtatgac
ctgacagtgcgggacagcgacggcagtgttgtgcagttcctgtacggggaagatggcctg
gacatccccaaaacgcaattcctgcagcctcgccaactcccgtttatccaggaaaactat
gaggtcatcaggaagtccaattgcttggatgaagtactggggagaatggactctgaggca
gcagccagccacttcagagcccttcgtaaatggaaggccaggcgggaggcagccgcctgc
agggaggggccattcttgctgttctcccagaagaaactgtccaagcagaaatgccagagc
gagcaaggggaactctctgcagggcgggacagtgccacactgcagctggtggagcgctgg
cgttctctggataattctaaacgcagtaaatacacaaagaagacattgcactgccctgag
ccctgtctggcccatctccgcccagacatctcctttgggtcagtctcggagacatttgat
gccatcgtggagtgctacctctccaaggtggtctctgaggaatactccaaggaactggaa
actgacagactgaggcagctgcttcagctgaagtggcagagggcactgtgtgatccaggc
gaggcagtggggcttctggctgcccagagcatcggggagccctccacccagatgaccctg
aacactttccactttgctggcaggggagagatgaatgtaaccctgggaatcccaaggctg
agggagatcctgatgatcgctagctccagcataaagacccctatgatgcgtgttcccgtg
ctgaacactaggagagcactgaagaaggttcagaccctccggaagaagttaacacgcgtt
tgtctggcagaggtgttgcagagactagatgtgcaggagatacttcgggttgacggaaag
cagcagaaaagccgggtcttcaagctcacattccacttcctgcctccagagcgctacaaa
gatgataacctgctgtccccccagcagattctgcactacatggaaaccaggttcttccgc
atcctgttggaggccataaagaagcggagtgccaagctggcatccataaacagggtagac
atgcggaaggccagtcagaaggacactgaccgggacactggtgattcccagggcagcctg
ggtaatggcgatggggaagaggaggcgggggagggaggtgagattgtggacggcgaagct
gatgaaggagatgctgatgccaccgacaccaaacggagagagaagcaggaggaggaggtg
gattacgagagcgaagagggggaggacgaggacgagagagatgacctggcggaagagaca
gaggaaacgccccctaaggacatggaggaggataaagagccagaggaggactacaccgcg
ccccctggattcgctgatggtggcaagccagatgagacacattcccaggatttgttgagg
gtcaatgctgtccttgacataagctcagccatcgagacctacacatacgactgcaaaaat
ggcctgtggtgtgaggtaacgctgattctgcctgtcagcaaggtgcactttgacctgacg
tctctagtaggcacacaggcgcagagtgcggtcgtgcacgagaccaagggcataactcgc
tgcctgctgagtgaggtgaccacaccacaaggcacgaaagaactgatgctgaacactgag
ggcatcaacctgcaggagcttttcagatacagtgagattttggacttgaaccggttgtac
tccaatgagatccacgccatggccaacacatatggcatagaggtggcactgagagtcatc
gagaaggagatcaaagatgtctttgcggtctatggtattgaggtagaccctcggcacctg
tccctggtggcagattacatgacatttgagggcatgtacaagcccctcaaccgctttgct
atccagtccaactcctcccctttgcagcagatgacatttgaaaccagctacaagtttctg
aagcaggccaccatgctggggtcccatgacagcctgcaatctccttcagcccgtctggtg
gttgggaaggtggtgaagggaggaacgggactctttgacttgaaacagccactccagtag
DBGET
integrated database retrieval system
