Anguilla rostrata (American eel): 135259740
Help
Entry
135259740 CDS
T10705
Symbol
smarcc1a
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135259740 (smarcc1a)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135259740 (smarcc1a)
PBAF complex
135259740 (smarcc1a)
GBAF(ncBAF) complex
135259740 (smarcc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135259740
NCBI-ProteinID:
XP_064200510
LinkDB
All DBs
Position
1:57505752..57530172
Genome browser
AA seq
1080 aa
AA seq
DB search
MATSASVTGGTGSSGQATGQAGSGPSVGRKKDGGPSSKYWESAETVSQLESVRLWIGKHY
KKYVQADSPSSKFLASLVVQLLQFQEDAFGRRVNNPALTKLPAKSFLDFKAGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMNVEKTLVQNNCLTRPIVYLVPEMEQKQANK
LKDIIKRHQGSITEDKSKATHHIYPSPAQSEEEEWLRPVMRKDKQVLVHWGMYPDSYDTW
VSASDVEGDVEEPPNPEKPCKVHAKWVLDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPR
EEESSRTPDRKDRKAASGKKRRRSPSPPATPAESRKKGGKKGNPGPYWKRRGHREEEEPE
EDLTKDMEDPTPVPNMEEVTLPKNVNPKKDSENTPVKGGTVADLDEQEDDSMVSGGKEEE
EPGKAEVNRLMDSSEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSKTP
EIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDADSR
PLPMGPPPTPHFNVLADTPSGLVPLHHRPPQVPASQQMLSFPEKGKDKPSDLQNFGLRTD
IYSKKNPKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP
IEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRV
REEVPAELVEAHVKKVQEAARSTGKVDPAYGLESSGIAGTAPEEPEKTESSEGEKAETDG
ESQQADKAESKDEAEKPGESAERPAEGERPKTEPAEPADREEAESDGGEEAKTADKDREE
PMDTAEGPKEAEGEEGQKKLEHDVGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQQ
MEQQQQQQQQQAAAAAAQNPSVHLGHPGYPPMHHPMGPHHPPQTGPMGVPGQPMPGRMMP
GGPPVGQPQPNMPSMPNMPPMMGPRHPGAPNGMYTGPPPAQPDGMPPAPVGPPAPRVAEN
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcggcaagtgtgacggggggaacgggttcaagcggacaagcgacggggcag
gcgggcagcggtccctcagttggtaggaagaaagatggtggtccgtcctcgaaatattgg
gagagcgcggagacagtctcccagttagagtcggttcgtctgtggatcggaaaacactac
aaaaagtatgtccaggctgactctccctccagcaaatttttggcaagcctggttgtccag
ctgctgcagttccaggaggatgctttcggcagaagagtcaacaacccagctctcaccaaa
ctgcctgcaaagagtttcctggacttcaaggcagggggggctctgtgccacatcctgggc
tctgcgtacaagttcaagagtgagcaaggctggcgccgctttgacctacagaacccctcc
aggatggacaggaatgttgagatgtttatgaatgtggagaagactttggtgcagaacaat
tgcctgacgcgaccaattgtgtatctggtccctgaaatggagcagaaacaggctaataag
ctgaaggacatcatcaagagacaccagggctccatcactgaggacaagtccaaggccacg
caccacatctacccttccccagcccagtcagaggaagaggagtggctccgcccagtcatg
cggaaggacaaacaggtgctggtgcactggggcatgtaccctgacagctatgacacatgg
gtatctgccagtgatgtggaaggggatgtggaggagccgcccaacccagagaaaccgtgc
aaggttcatgccaagtgggtcctggacacagacgcttttaatgaatggatgaatgaggag
gactatgaagtggacgagaacaagaagccagtgagtttccgccagcgcatcttcccgcgg
gaggaagagtcttcccgtacacccgatcgcaaggaccgcaaggccgcctcgggaaagaag
aggaggcgctcgccgtcgcccccagcaacccctgcggagtcccgcaagaaggggggcaaa
aaggggaacccagggccgtactggaagcgccgaggccaccgagaggaggaggagccggag
gaggacctgaccaaggacatggaggaccccacaccggtccccaacatggaggaggtgacc
ctgcccaaaaacgtgaaccccaagaaggacagtgagaacactccggtgaagggcgggaca
gtggcggatctggatgaacaggaagatgactccatggtctcaggaggcaaggaggaagag
gaaccagggaaggcggaggtgaatcgcctgatggactccagtgaggacaatgtgacggag
cagacccatcacatcatcatccccagctacgccgcttggtttgactacaactgcatccac
gaaattgaaagacgagcactgccagagttcttcaatggaaagaataagtccaagactcca
gagatatacctggcctaccgaaacttcatgattgacacgtaccggctgaacccccaggag
tacctgacctccacgtcctgccgcaggaacctgacgggggacgtgtgcgctgtcatgaga
gtccacgccttcctggagcagtggggcctggtgaattaccaggtggacgctgacagcagg
cccctccccatggggcccccgcccactccccacttcaacgtgctggcggacacgccctcc
ggcctggtgcccctccaccaccgccccccacaggttccagcctcccagcagatgctcagc
ttcccagagaaaggcaaagacaagccatcggacctgcagaacttcggccttcgcacggac
atctactccaagaagaaccccaagagtaaaggtgcaagtgccggcagggagtggactgag
caggagactctgctgctactggaggccctggagatgtacaaggacgactggaacaaggtg
tcagagcacgtgggcagccgcacgcaggacgagtgcatcctgcacttcctgcggctgccc
atcgaggacccgtacctggagaactcggacgcctcgctgggtcccctggcctaccagccc
gtccccttcagccagtccggaaacccggtcatgagcaccgtggccttcttggcttctgtg
gttgacccgcgggtggctgccgccgctgccaaggctgcacttgaggagttctcgcgggtg
cgggaggaggtcccggcggagctggtggaggcgcacgtgaagaaggtgcaggaggcggcg
cgcagcacgggcaaagtggaccccgcctacggcctggagagcagtggcatcgccggcacc
gcccccgaagagcccgagaagacggagtcatcagagggggagaaggcggagaccgatggc
gagtcccagcaagctgacaaggccgagtccaaggacgaggcggagaagccaggcgagtcg
gccgagaggccggcggagggagagaggccgaaaaccgagcccgccgagccggcggaccga
gaagaggccgagagcgacggaggggaagaggccaaaaccgcagataaggaccgggaggag
cccatggacacggccgaaggccccaaggaggccgagggcgaggaaggccagaagaagctg
gagcatgacgtcggggaggggaacatcgccacggccgcggccgccgccctcgcgtccgcc
gccaccaaggccaagcacttggcagcagtggaggagagaaagatcaagtctctggtagcc
cttctggtggagacccaaatgaagaaactggagatcaaactcaggcacttcgaggagctg
gagaccatcatggaccgggagaaggaagcgctggagctgcagaggcagcagctgctgacg
gagcggcaggccttccacatggagcagctgaagtacgctgagatgaaggcccgccagcag
atggagcagcagcagcagcagcagcagcagcaggccgccgccgccgccgcccagaacccc
agcgttcacctcggccaccccggatacccgcccatgcaccatcccatgggcccgcaccac
cccccacagacaggacccatgggagtccccggccagcctatgcccgggcgcatgatgccc
ggtggaccgcccgtcgggcagccccaacccaacatgcccagcatgcccaacatgcccccc
atgatgggaccccggcaccccggagcccccaacggcatgtacaccggccctccccctgca
cagcctgatgggatgccacctgcccccgtgggacctccagcgccccgtgtggccgagaac
taa
DBGET
integrated database retrieval system
