Anguilla rostrata (American eel): 135260573
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Entry
135260573 CDS
T10705
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03013
Nucleocytoplasmic transport
arot03015
mRNA surveillance pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135260573 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
135260573 (acin1a)
03015 mRNA surveillance pathway
135260573 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135260573 (acin1a)
03041 Spliceosome [BR:
arot03041
]
135260573 (acin1a)
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135260573 (acin1a)
Spliceosome [BR:
arot03041
]
Complex C
Other components
EJC/TREX
135260573 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
135260573
NCBI-ProteinID:
XP_064201978
LinkDB
All DBs
Position
8:4087356..4121176
Genome browser
AA seq
1885 aa
AA seq
DB search
MEGVAATGVGERAKGSKMADLEDVTLDGRPLHSLRVADLKAALEQRGLPKSGQKNALIKR
LKGALMLENLQRTSTAHIGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAE
ADDMDSPVGPDQEDHAEANDGASFPQPGQEVSPVVGIQNKRRPFDQREEKEEGEKVWGRT
DKTGEEDGAGETEAAAAAAEQASPFSQPNTRRAPFYQGPAAQAAGDAPAAEPEPQGAPGI
RGRWSSGRQSQDDPAPSSPSAPPRAVASLSVRVVGDPERQGPTQPRPADPPVPAHSAPQP
GLAQPQPQRASRSQQDSDEDSDDDEEEDDEEEEEDWGPGQRRGSGWEPPSSLAARERSRR
AQQPSQHIPLQMPPHQPHPHSHPQLSLRQPTPPPSPPPELSFPLPETPKQSPPSLDEAEG
VAGAGAGGVGAVGVRRHPPEGGRSPPSLQRQDSSSSSGSSSSNSRSSSPEPHGGAGERKP
GPLTLLARKMESEGAFGGGRKKGREEPEGAAMATTAADGLAAALFPGALLREGGVSTIAH
TGGPVPAPPASGPALLGNKGAASAAVPTITFSAALAAFHPLDRGPHFPAFGPAAAPARVV
MATAEDPEREAGRMDPHGAEGRDAAELLLSREREERERALERQREQEEREKALEREREKE
REEREKALQREREEREKALEREREKEREEREKALHREREEREKERVEREKALQREREERE
KALEREREKERVEREKALQREREEREKALEREREKERVEREKALQREREEREKALERERE
KEREEREKALQREREEREKERVEREKALLREREEREKALEREREKERVERENALQREREE
REKALEREREKEREEREKALQREREEKEKALEREREEKMMLEKERESRLPPWKRGREFGA
LTSSATPIPGLSAVAGNAPEVEREEPAAGPPPTQTASKPAESQPSTPLSPQPSSKKFRFL
RDTPLPSSPASATPLIKRPRTFSDTPPAEVPPLPASSPSRPGPGAEGAGGGERAAVPGAA
QREGLLQTGSLPAAGGEHPLTATPQPTGAAGPARPEGASTEAGAPAGASQPGEGQRADPG
KPEEERARKPTQGAVTGPVLPPSPPPEENESERGPDRERAPARDRDGRSSPSSDSSSSDS
DSASSSSHSSGSSSSSEDKSHSVPRSRRSASGRRDSEEDPPTAPPFKRTGAHLGKAGSGA
ANEGESHSKRPCLGRGGEKHEEKMEEEMEGADERQRPAREVKQAAMSESPGPECDQAPES
SEGRAEESTTPKAFTARKISLATVTKPPPGAPAGSVGASAPAPAPQGEAEPGGPGGRKRR
WGSSTAVTAKKPSISITTDSLKSLIPDVKLAAGPGGQEAVVELHPEEGRLSEDEEEAGER
GEVGDQGQDKDLKIRRTVTQVVHAETQENGQKEPKRVDEEEEEEEEREAETERGNKEDKN
GSGSSSGGSSLEVAMEVQTPSASREVELKKVTPSDTLVRRSISQQKSGVSVTIDDPVCSA
RQPSPPRGKITNIVHVCNLVRPFTLGQLKELLNRTGTVVEEAFWIDKIKSHCYVTYSTTE
EAVATRAALHGVKWPQSNPKFLSVDFCEQDELDFHRGLLTAERPGEEERGGGGGGGGGGA
APAGPPSLLPERERGPGGGVRDQWAQREREMERRERTRAEREWDRDKVRDFGKPGEDREA
VGRRSRSRDRERRRKERGKSKERKTDKKEKAPEEPPAKLLDDLFCKTKAAPCIYWLPLTE
QQALQKEAERAERMKEREKRRKELQEEEDRKREEERRERAKGREKEAGAVAGGGGGGSGT
SAGAVGAGGGSGSGSGRGADGERDRERERERERDRDRDRERERERERGRDRDGDKRREGY
RRPAGQGGARRSRSRSDPPPRDRRR
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgttgcagcgaccggagttggagagagagcgaagggaagcaagatggcggac
ctcgaagacgttacgctggacgggaggccgcttcattcgctccgtgtggcggatttaaaa
gccgctttggagcaacgcggcctccctaaaagcgggcaaaagaatgccctaatcaagcga
ctcaagggggctctgatgctggaaaacctacagagaacctccactgctcacatcggactg
cagccaaactcccagatcggggaggagatgagtcagaacagcttcatcaagcagtacctg
gccaagcagcaggagctcctcaggcagcgactggagagagaggcgcgggaggcggctgaa
gcagatgacatggacagccccgtaggcccagaccaggaggaccatgctgaagctaatgat
ggagcttcctttcctcaaccaggccaggaagtctctcctgttgtggggatccagaacaag
cgacgcccttttgaccagagggaggaaaaggaagaaggggagaaggtttggggaagaacg
gacaagacaggcgaggaagacggggccggggagactgaggcggcggcggcggcggcggag
caggcctcgcccttctcccagccgaacactcgcagagcgccgttctatcagggcccggct
gcgcaggcggcgggcgacgcccccgccgcggagcccgagccccagggggccccgggcatc
cggggccggtggtcctccggccggcagagccaggacgaccccgccccctcctcgccctcg
gcaccgccccgcgccgtggcctccctctctgtgcgcgtggtcggggaccccgagaggcag
ggcccgacccagccccgcccggcggacccgcccgtccccgcccactccgccccgcagccc
ggcctggcccagccccagccccagcgggcctcgcgctcccagcaggacagcgacgaggac
agcgacgacgacgaggaagaggacgacgaggaagaggaggaggactgggggccggggcaa
aggagggggagcgggtgggagccccccagcagcctggcggctcgggagaggtccagacgc
gcccagcagccctcccagcacatccccctgcagatgcccccccaccaaccgcacccccac
tcccaccctcagctgtcgcttcgtcagccgacacccccgccctcccctcctccagagctc
tccttccccctgcccgagacccccaagcaaagtccacccagcctggatgaggctgaaggc
gtggcaggggcaggggcaggcggggtgggtgcggtaggggtgcggagacacccacccgag
ggaggccgttcccccccgtccctgcagcggcaggacagcagctccagctccggcagctcc
agcagcaacagccgcagcagcagccccgagccacacgggggcgccggcgagcgcaagccc
ggcccgctcaccctgctggcgcgcaagatggagtccgagggagccttcggcgggggccgg
aagaagggccgcgaggagccggagggagctgccatggcaaccaccgccgccgacggcctg
gcagcggcgctgttccccggcgccctgctccgcgagggcggagtctcgacaatcgcccac
acggggggccccgtcccggccccgcccgcctctggccccgccctgctgggcaacaagggc
gccgcctcggcggcggtgcccaccatcaccttcagcgccgccctggccgccttccacccg
ctggacagggggccccacttcccggccttcggccccgcggccgccccggccagggtcgtc
atggcgacggccgaggaccccgagcgggaggcgggcagaatggatccgcacggggccgag
ggccgggacgccgcggagctgctgctgtcccgggagagggaggagagagagagagcgctg
gagaggcagagagagcaagaggagagggagaaggcccttgaacgagagagggagaaagaa
agagaggagagagagaaggctctgcagagagaaagggaggagagggagaaagcccttgaa
cgggagagggagaaagaacgagaggagagagagaaggctctacacagagaaagggaggag
agggagaaagaacgagtggagagagagaaggctctacagagagaaagggaggagagggag
aaagcccttgaacgggagagggagaaagaacgagtggagagagagaaggccctgcagaga
gaaagagaggagagggagaaagcccttgaacgagagagggagaaagaacgagtggagaga
gagaaggctctgcagagagaaagagaggagagggagaaagcccttgaacgggagagggag
aaagaaagagaggagagagagaaggctctacagagagaaagggaggagagggagaaagaa
cgagtggagagagagaaggctctgctgagagaaagagaggagagggagaaagcccttgaa
cgagagagggagaaagaacgagtggagagagagaatgctcttcagagagaaagagaggag
agggagaaagcccttgaacgagagagggaaaaagaacgagaggagagagagaaggccctg
cagagagaaagggaggaaaaagaaaaggctctggagcgggagagggaggagaagatgatg
ctggagaaggagagggagagccgcctgcctccgtggaaacggggccgcgaatttggggct
ctcacctcctccgccacgcccatcccgggcctgtccgctgtggctgggaacgcccctgag
gtggagagggaggagcctgccgcaggcccgcccccgacccagacggccagcaagcccgcc
gagagccagccctccacccccctgtccccccagccctcctccaagaagttccgcttcctg
cgggacacccccttgccgtcgtcccccgcctccgccaccccgctcatcaagaggccccgc
accttctccgacacgccccccgcggaggtcccgcccttacccgcctcctcccccagcagg
cccggcccgggcgcggagggggccggcgggggcgagcgcgccgccgtcccgggcgcggct
cagagggaggggctcctccagacgggctctctgccggccgccgggggcgagcacccgctc
acggccacgccccagccgacgggcgccgccgggccggcccgccccgagggcgcgtccacg
gaagccggagcccccgccggggcgtcccagccgggggaggggcagcgggccgacccaggg
aagcccgaggaggagagagcccggaaaccgacgcagggggccgtcaccgggcccgtcctg
cccccctcaccgcctcccgaggagaacgaatcggagaggggcccagaccgggagcgggcc
ccggcccgggaccgggacgggcgctcctcgccttctagcgactcctcttcctctgattcc
gactctgcctcatcttcctcacattcctccggatcgtcttcttcctcagaggacaagtcc
cactctgttcccagaagcaggcggtctgccagcggtcggcgcgactcggaggaggacccc
cccacagccccgcccttcaagaggacaggagcgcacctaggcaaagcaggaagcggcgca
gccaatgagggggagagccacagcaagaggccgtgcctggggagaggaggagagaaacat
gaggagaaaatggaagaagagatggaaggagctgatgaaagacaacgccccgccagggag
gtgaagcaggcagccatgtcggagtcgccgggccctgagtgtgatcaggccccagagagc
agtgagggccgcgcggaggagagcaccacgccaaaggcattcactgcccgcaagatctcc
ctggccacagtcactaagccacccccaggggccccggcgggcagcgtaggggcgtcggcg
cccgcaccggccccccagggggaggcggagcctgggggccccggcgggcggaagcggagg
tggggatccagcactgccgtcactgccaagaagccctccattagcatcaccacagactcc
ctgaagtctctgatcccggacgtgaagctggcggcggggcccggcggccaggaggccgtg
gtggagctgcacccggaggagggccggctctccgaggacgaggaggaggccggcgagcgg
ggcgaggtcggcgaccagggccaggacaaggacctgaagatccgccgcaccgtcacacag
gtcgtccacgctgagacccaggagaacgggcagaaagaaccgaagagggtcgacgaggaa
gaggaggaggaggaggagagagaggcagaaacagagagggggaacaaggaggacaagaac
ggcagcggcagcagcagcggtggcagcagcttggaggtcgccatggaggttcagaccccc
tcagcgtcccgggaggtggagctgaagaaagttacccccagtgacacgctggtgcgccgc
tccatcagccagcagaaatcgggcgtgtccgtcaccatcgacgatcccgtctgctccgcc
cgacagccctcgcccccccggggcaaaatcacgaacatcgtccacgtctgcaacctggtg
cgtcccttcactctgggccagctgaaggagctgctgaaccggactgggaccgtggtggag
gaggcgttctggatcgacaagatcaagtcgcactgctacgtcacttattccactacggag
gaggccgtggccacccgggccgctctgcacggagtgaagtggccccagagtaaccccaaa
ttcctcagcgtggacttctgtgagcaggacgagctggatttccaccgggggctcctgacg
gccgaacgcccgggggaggaggagcgcgggggcgggggcggaggcggaggtggcggggcg
gccccggcggggcccccgtccctgctgccggagcgggagaggggccccggggggggcgtg
cgggaccagtgggcgcagcgggagcgggagatggagcgccgcgagcggacccgcgccgag
cgggagtgggaccgggacaaggtgcgcgatttcggcaagcccggggaggaccgggaggcc
gtgggccgacgctcccgatcgcgggaccgggagaggaggcgcaaggagcggggcaagagc
aaggagaggaagaccgacaagaaggagaaagccccagaggagcctccagccaaactgctg
gatgacctgttctgtaaaaccaaagcagccccctgcatatactggctccccctcactgaa
cagcaggcactgcagaaggaggcggagcgtgccgagcggatgaaggagagggagaagagg
aggaaggagctgcaggaggaggaggaccggaagagggaggaggagcgcagggagcgtgcg
aaggggagggagaaggaggcgggcgcggtcgccggcgggggcggggggggcagcggcacc
agcgcaggtgcggtgggggcgggcgggggcagcggcagcggcagcggccggggggccgac
ggagagagggacagggagagagagagagagagggagcgagacagggaccgggacagagag
agggagcgagagagggagcgaggccgggacagggacggggataagaggagggaggggtac
cgcaggcccgcggggcaggggggggccaggcgctcacgcagccgcagtgaccccccaccc
cgggacagacgccgctga
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