KEGG   Anguilla rostrata (American eel): 135261342
Entry
135261342         CDS       T10705                                 
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot03082  ATP-dependent chromatin remodeling
arot03083  Polycomb repressive complex
arot04110  Cell cycle
arot04330  Notch signaling pathway
arot04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:arot00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    135261342 (hdac1)
   03083 Polycomb repressive complex
    135261342 (hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    135261342 (hdac1)
   04350 TGF-beta signaling pathway
    135261342 (hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    135261342 (hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arot03036]
    135261342 (hdac1)
Enzymes [BR:arot01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     135261342 (hdac1)
Chromosome and associated proteins [BR:arot03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     135261342 (hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     135261342 (hdac1)
    BRAF-HDAC complex
     135261342 (hdac1)
    REST complex
     135261342 (hdac1)
    SHIP complex
     135261342 (hdac1)
    MiDAC complex
     135261342 (hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     135261342 (hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    135261342 (hdac1)
  Chromatin remodeling factors
   NuRD complex
    135261342 (hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 135261342
NCBI-ProteinID: XP_064203631
LinkDB
Position
8:28811872..28821174
AA seq 481 aa
MALTTQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQDDSGDEEEEDPDKRISIRAHDKRIACEEE
FSDSEDEGQGGRRNTANYKKAKRVKTEEEKDGEEKKDVKEEEKMVEEKMDTKGAKEELKS
T
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcgcttaccactcaaggaacaaagaagaaagtttgttattattatgatggcgatgtt
ggaaattattactatggccagggccaccctatgaagccacacagaatccgcatgacacac
aacctcctgctcaactatgggttatataggaagatggaaatttaccggccccacaaagcc
aatgcagaagagatgaccaaatatcacagcgacgactacatcaagttcctgcggtccatt
cgccccgacaatatgtctgagtacagcaagcagatgcagagatttaacgtgggagaggac
tgcccggtgtttgacggcttatttgagttctgtcagctttccacaggagggtctgtagct
ggagccgtgaagctgaacaaacagcagacggacattgccattaactgggccggagggctt
catcacgccaagaagtctgaggcgtcggggttctgctatgtcaatgacatcgtcttggcc
atcctggagctgcttaaataccaccaaagagtgctgtacattgacatcgacatccaccat
ggggatggagtggaggaggctttctacaccacagaccgtgtcatgaccgtgtccttccac
aagtacggggagtacttccctggcaccggagacctcagagacattggagcggggaagggc
aagtactacgctgtaaactacccactcagggatggaatagacgacgagtcttatgaagcc
attttcaaacctattatggccaaagtgatggagatgtaccagcccagtgcagtagtgcta
cagtgtggagcagactctctgtctggggatcgacttggctgttttaacctcactattaaa
ggccatgccaagtgtgtggaatacatgaagagcttcaacctgccactgctgatgttgggt
gggggagggtacaccatccgtaacgtggcccgctgttggacctttgagacggccgtagcc
ctggacagctccattcccaacgagctcccatacaacgattactttgagtactttgggcct
gacttcaaactgcacatcagcccttccaacatgaccaaccagaatacaaacgactacctg
gagaagatcaagcagcgtctgtttgagaacctgcgcatgctgccccacgccccgggcgtc
cagatgcaggccatccccgaggacgcagtgcaggacgacagcggagacgaggaggaggaa
gaccccgacaagcgcatctccatccgtgcccatgacaagaggatagcctgcgaagaggag
ttctcagattctgaggacgaaggccagggcgggcgcaggaacacagccaactacaagaag
gccaagcgagtgaaaacggaggaagagaaggatggagaggagaagaaagatgtaaaagaa
gaagagaaaatggttgaggagaaaatggacacaaagggggcaaaagaagagttgaaaagc
acctga

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