Anguilla rostrata (American eel): 135261447
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Entry
135261447 CDS
T10705
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135261447 (smarcc1b)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135261447 (smarcc1b)
PBAF complex
135261447 (smarcc1b)
GBAF(ncBAF) complex
135261447 (smarcc1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135261447
NCBI-ProteinID:
XP_064203823
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Position
8:32260751..32292761
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AA seq
1066 aa
AA seq
DB search
MRKASRGLCGWRRPVTAMASTATATGGTVSGAPPASHAANVTSVSKKKDGGPSSKFWESS
ETVSQLESVRMWIGKHYKKYVQTDSPSNKSLAGLVVQLLQFQEDAFGRRVSNPALTKLPT
KCFLDFKAGGALCHILGSVYKFKTEQGWRRFDLQNPSRMDRNVEMFMNVEKTLVQNNCLV
RPLVFLAPEIEQKQASKLKDIIKRHQGSVTEEKAKATHHIYPSPTSVEEEEWLRPVMRRD
KQVLVHWGMYPDSYDTWVSTSDVEADVEDPPNAEKPWKVHAKWVLDTDAFNEWMNEEDYE
VDESRKAVSFRQRVFPKEEESPRTLHRKERKAAAAGKKRRRSPSPSSESRKKGAKKGSAG
PYSKRRGQREEEEPEEDLTKDMEDPTPVPNMEEVTLPKNVNPKKDSENTPVKGGIMADLD
EQEDDSMLSGGKDEDEGKGEMGRLLDSGEDNVTEQTHHIIIPSYASWFDYNCIHQIERRA
LPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLE
QWGLVNYQVDAESRPLPMGPPPTPHFNVLADTPSGLMPLQHRPSQVSASQQMLSFPEKGR
EKPTELQNFGLRTDIYAKKNPKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSDASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
AAAAKAALEEFSRVREEVPLDLLESHVKKAQEGPRALFSLEASGIAGTAPEELENAGAAE
PEKMEVNPESQQPVKAEDSEEPERSSQSADRPAEGDRLKNESSEPAEREEAEGEGVQEGK
TEREKEEAMDTALIPREGEREEGRRRLESELGEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQAFHLEQVKYA
EMKARQQMEQQQPAAAPPGQNPGGQQGYPSMHHSVGPHHAPQTWSMGGPGQDMSGRMMPA
APPGGPHQPPMMGSRHPGATNGMYPTPPPAQPDGTAAAPIHSGAES
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggcttctcgcggcctctgcggatggagaagaccggtaacggcaatggcttcg
acggctacggcaactggaggaacggtttcgggcgcaccaccggccagccatgcggcaaat
gttacctcggttagcaagaaaaaagatggtggcccttcctcgaaattttgggaaagttcg
gaaacggtctcgcaattggagtctgttcgcatgtggattggaaagcattataaaaagtat
gtccagacagactctccttccaacaagtctctggctgggctcgtggtccaactgctgcag
ttccaggaagatgccttcggcaggagagtgagcaaccctgctctcaccaagctgccaacc
aaatgcttcctggacttcaaggcagggggcgctctgtgtcatatcctgggctcagtatac
aagttcaagactgaacaaggctggcgcaggtttgatctgcagaatccctccaggatggac
aggaatgtggagatgtttatgaatgtggagaagaccctcgtgcagaacaactgcctggtg
cggccgctcgtgttcctggccccagaaatcgagcagaaacaggccagcaagctcaaggac
atcattaagagacaccaggggtctgtcacagaggagaaggctaaagccacacaccacatc
tacccgtctccaacctcagtggaggaagaggagtggcttcgcccggtcatgcgcagggac
aagcaggtgctcgtgcactgggggatgtacccggacagctatgatacctgggtgtctacc
agtgatgtggaggcagatgtggaagacccacccaacgcagagaaaccctggaaggttcac
gccaagtgggtcctcgacacggacgccttcaacgagtggatgaacgaggaggactacgag
gtggacgagagcaggaaggctgtgagcttccgccagcgtgtcttccccaaggaggaggag
tctccccgtacactccaccgcaaggagcgcaaggcggccgctgcagggaagaagaggagg
cgctcgccgtccccctcctcagagtcccgcaagaaaggggccaagaaaggtagcgccggg
ccgtactctaaacgccgcgggcagcgggaggaggaggagccagaggaggacctcaccaag
gacatggaggaccccacccctgtgcccaacatggaggaggtcaccctgcccaagaacgtg
aaccctaagaaggacagtgagaacactccagtgaagggaggcataatggctgacctggat
gaacaggaggatgattccatgctctctggaggcaaggacgaggacgagggcaagggggag
atgggtcggctgctggactcgggcgaggacaacgtgacggagcagacgcaccacatcatc
atccccagctacgcctcctggttcgactacaactgtattcaccagattgagaggcgggcg
ctgccagagttcttcaacgggaagaacaagtctaagtctccggagatatacctggcctac
cgtaacttcatgattgacacgtaccggctgaacccccaggagtacctgacctccacgtcc
tgccgcaggaacctgaccggggacgtgtgcgccgtcatgagagtgcacgccttcctggag
cagtgggggctggtgaattaccaggtggacgcggagagccggcccctccccatggggccc
ccacccaccccccacttcaacgtgctggcggacacgccctccggcctgatgcccctccag
caccgcccctctcaggtgtccgcgtcccagcagatgctcagcttcccggagaagggcaga
gagaagccgacggagctgcagaacttcggcctccgcaccgacatctacgccaagaagaac
cccaagagtaaaggagccagtgcaggccgggagtggaccgagcaggagaccctgctgctc
ttggaggccctggagatgtataaggacgactggaacaaggtgtcggagcacgtgggcagc
cgcacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccgtacctg
gaggactcggacgcctccctcggtccgctggcctaccagccaatccccttcagccagtcg
ggaaaccccgtcatgagcaccgtcgccttcctggcctccgtggtcgacccccgagtggca
gctgctgcagccaaggcagccttggaggagttttcgcgggtgcgagaggaggtcccgctg
gacttgctggagagccatgtgaagaaggcgcaggaggggccgcgcgctctgttcagcctg
gaggccagcggcatcgccggcactgccccggaggagctggagaacgccggagcagcagag
ccggagaagatggaggtgaaccccgagtcccagcagcctgtcaaggctgaggacagcgag
gagccggagagatccagccaatcggcagatagaccagcggagggagaccggctgaagaac
gagagcagtgagccggcggagagagaagaggccgagggcgaaggagttcaggagggcaag
acggagagggagaaggaggaggccatggacacagccctgatccccagggagggagagcgg
gaggagggcaggcggaggctggagtcagagctgggggaggggaacgtcgccacggcggcc
gccgccgccctcgcatccgctgccaccaaggccaagcacctggcggcggtggaggagagg
aagattaaatctctggtggctctgctggttgagacgcagatgaagaagctggagatcaag
ctcaggcactttgaggagctggagaccatcatggaccgagaaaaggaagcgctggagcag
cagaggcagcagttgctgtcggagcggcaggccttccacctggagcaggtgaagtacgct
gagatgaaggcccgccagcagatggagcagcagcagcctgccgccgccccccccggccag
aaccctgggggccagcagggctaccccagcatgcaccactccgtgggcccccaccacgct
ccacagacatggtccatgggggggcccggccaagacatgtcagggcgcatgatgcctgct
gcaccccctggtggcccgcatcagcctccaatgatggggtcccggcaccccggagccaca
aacggcatgtacccgactccgccccccgcacagcctgatgggacagcggctgctcccatc
cattcaggagctgagagctaa
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