Anguilla rostrata (American eel): 135261573
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Entry
135261573 CDS
T10705
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135261573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135261573
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135261573
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135261573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
135261573
NCBI-ProteinID:
XP_064204100
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All DBs
Position
8:complement(36343465..36361077)
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AA seq
924 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRFIEKHRYHI
RMLETILRMLDNDSVQVDSIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPGHSHMEDDLFLHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSGASSSSLVSMATITGGSGAITGGNSLLGSMGGLLS
NSGSYSTATQQPQQSQQQNQQQHPPPAKNSPSNTNPSPSNLLLLPTSAASSPPSTSTPGP
LATNSQPQGTSGPTSTSALGLGLGLGLGKGGVTGAGSTSQMSGLGLSGMPASLNTMAGLL
SSSTPAPYAQAAASGAVGSGLGGSIGGGAGSSSGSSGGAVTGNGSNGSGVSSGLLGSGGG
VGGVGGGILGLGSGQTAVQGPPQMSPSPVGGLAPGNSVGVIGGNGGSSGAVGSGGVGAGG
GSGALARPPSGQKQNGSTSYSAVVADSAPDSALSSASQSQSGQPSSLGPTSNPPKESSCS
LLSSMTLAPSSPSPSYSESKPGGGSLLNGPHSYSQASEGIKAPEPLSSLKSMAERAALGS
GLEGGDLPALHLADRGERARERSPRSAPSLAVSVRPSPACRVSIPPSLGVCPLGPVPLSK
DQMYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDSVEFYQRLSTE
TLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDY
EKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggtgaaatagatcgatgtttgaaaaaagtagcagag
ggcgtagaacagtttgaagacatttggcaaaagctgcataatgccgccaatgcaaaccag
aaggaaaagtatgaggcagacctcaagaaagaaataaaaaaattacagcgtcttcgagac
cagataaagacatgggtggcctcaaacgagatcaaagacaaaaggcagctagttgacaac
cgcaaactcattgaaacgcaaatggagcggttcaagatagtggagcgggagaccaagacc
aaggcctactcgaaggaggggctgggcctggcgcagaaggtggacccggcccagcgggag
aaggaggaggtgggccagtggctgacgaatacgatagacactctgaacatgcaggtggac
cagtttgaaagtgaagtggagtctctgtctgtccaaactcgaaagaagaaaggtgacaaa
gagaaacaggaccggatagaggagcttaagcgcttcattgaaaagcacaggtaccacatc
cgcatgctagagaccatcctgcgcatgctggacaacgactcggtgcaagtggactcgatc
cggaagatcaaggacgacgtggagtactacctcgactcttcacaggacccggactttgag
gagaacgagttcctgtacgatgacctggaccttgaagatattcctcaagccctggtggca
acgtctccgcctggtcactctcacatggaggatgacctcttcctccactccagcagtaca
cccacctccaccacctcctcttccccaatacctccctcacctgctacttgcactacggag
aactcggaagacgacaagaagaggggacgctctacagacagtgaagtcagtcagtcacca
gtaaagaatggaaacccctcttcgtcactgtcatcctcctcctcctcgtcctcctcctct
tcctcgtcctcttctggagcctcctcgtcctctctggtctccatggcaaccattacgggg
ggcagcggagccatcacggggggcaacagtctcctaggtagcatggggggcctcctctcc
aactcgggcagctacagcacagcgacccagcagccgcagcagtcgcagcagcagaaccag
cagcagcacccgcccccggccaaaaactctccctccaacaccaaccccagcccctccaac
ctcctcctcctccccacctccgcggcctcctcgcctcccagcaccagcacgcccggcccc
ctcgccacaaactcccaacctcagggcacctcggggcccacctccacttcggccttgggg
ctggggctggggctgggcctgggcaaaggcggcgtgacgggggccggcagcaccagccag
atgtcgggcctgggcctgtcggggatgccggcgtccctcaacaccatggccgggcttctg
tccagctccacgcccgccccgtacgcccaggctgccgcctcgggggcggtgggcagcggg
ctgggcgggtccatcgggggcggagccggcagcagcagcggcagctccggcggggcggtc
accgggaacggcagcaacgggagcggggtgtcgtccggcttgctgggctccggcggcgga
gtgggcggggtcggcggcgggatcctgggcctgggctccgggcagacggccgtccagggc
ccccctcagatgtccccgagccccgttggcggcctggctcctgggaactccgtgggagtc
atagggggtaacggaggcagttcgggggcagttgggagcgggggagttggtgcaggagga
ggcagcggggcgctcgccaggccccccagtggccagaagcagaacggcagtaccagttac
agtgcagtagttgcagacagcgcgccagactccgccctcagtagtgccagccaatcacaa
agtggccaaccctcttccttgggacctacatccaatccacccaaggagagcagctgcagc
ctcctgagctccatgaccctggcccccagctcgccctcgccgtcctacagcgagagcaag
ccgggcggcgggagcctgctcaacgggccgcactcctacagccaggcctcggagggcatc
aaggctccagagcccctcagctctctcaagtccatggcagagagggcggcgctgggctcg
ggactggagggaggagacctacccgccctgcacctggccgacagaggtgagcgtgcgcgc
gagcgctccccccgctctgcgccgagcctagctgtgagcgttcggccatcgccagcctgt
cgagtcagcatccccccgtcgctgggggtgtgccccctcgggcccgtcccgctctccaaa
gaccagatgtaccagcaggccatgcaggagtcggcctggacgcacatgccccacccctcc
gactcggagaggatcaggcagtacttgatgaggaacccgtgccccaccttgcctttccac
caccaggtgccccctcctcactctgactcagtggagttctaccagcggctgtccaccgag
acgctcttcttcatattctactatctggagggcaccaaggcacaatacctagcagccaag
gcactgaagaagcaatcatggcgattccacaccaagtacatgatgtggtttcagagacac
gaggagcccaaaaccatcacggatgagtttgaacaggggacgtacatttactttgactat
gagaagtggggccagaggaagaaggaaggattcacatttgagtacaggtacctcgaagac
cgagacctccagtga
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