Anguilla rostrata (American eel): 135262325
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Entry
135262325 CDS
T10705
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04510
Focal adhesion
arot04512
ECM-receptor interaction
arot04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135262325
Glycosaminoglycan binding proteins [BR:
arot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135262325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135262325
NCBI-ProteinID:
XP_064205367
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Position
9:complement(29558299..29598037)
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AA seq
1675 aa
AA seq
DB search
MQTLVLALLLTTLSFGVRDSEAAACAGCAGCDCSGVKGGRGDRGTPGLPGPPGVPGFPGP
EGGVGPGGEKGNDGIPGATGPKGIRGPTGLPGFPGTPGVPGLPGSDGPPGLRGIPGCNGT
KGDRGISGGSGHPGIQGLQGPPGLPGPKGEPGEILGTPQHSSGRGEPGTPGQPGVSGPPG
PPGLAGPVGPPGPSGYEGRPGSPGPPGPKGNMGLNFQGPKGEKGLSGLPGPPGPPGIIGE
QTRPRDYDVHRGEKGDQGVPGQPGEPGLPGPPGASGGYRGEKGEPGEAGKRGKPGKDGDP
GPAGYPGQKGEAGIPGLSGRDGEKGEKGDRGYPGAPGPVIGGHGGSGAVGQKGESGFPGI
PGAKGDRGPQGLSGPPGQPGAPGGQGGGSAGQPGFPGERGQKGDSGQPGVSIPGPPGRNG
LPGGPGAPGPPGAPAASGPCGNCLPGAPGLPGLQGEQGYPGGTGQKGEKGDTCINCFSNN
ISIPGAPGPPGPPGFSGNPGGPGAKGDRGYPGPAGSLGAPGSPGSVGAPGHPGQKGEPGN
AISVEGVRGEKGDTGFPGSPGLPGLDGRPGLDGAPGAPGPKGTSGSLLVKGERGPPGLPG
TPGLPGDRGAQGAPGFGPQGPTGEKGIQGTAGRTGAPGVPGAKGEPGQTRSEKGALGPPG
PAGESGLTGAPGAPGLPGAPGFNGSPGAKGDPGIPGIGLPGAPGEKGFPGAPGQPGTPGG
PGRPGLDGLPGSPGAPGGKGEPGYGLPGAQGPPGFSGAKGVPGPKGDPGYPGGPGGPGRN
GFDGGPGPKGDSGVPGIPGARGSPGAPAFGGQGPPGPPGPPGPAGAPGYSGGPGAKGDPG
APGLDIPGLPGDRGSPGIPGSPGPVGPPGPSAGLGRDGLPGFPGAKGDPGPIGPPGPQGA
PGPSGGPGFPGGKGDNGFPGLSGGPGGPGHKGERGSPGQPGAPGPTIQPIEVKGAKGDPG
GPGAGGLPGQKGALGPPGDAGNPGLDGQPGLPGPAGIKGDPGAPGLPGSPGAPGAKGNAG
DPGYPGPAGVKGDSGLPGGSGLPGQPGSPGFPGAKGDAGAPGFGAPGSPGVKGDPGQPGF
PGGPGPKGEAGSSGLPGLPGGPGVKGDPGFPGLQGGPGAPGTKGIDGGPGAPGLDGAPGR
PGEPGRPGGPGAPGEKGQPGRDGIPGPAGLKGDPGLPGGGHPGAPGLPGLPGPKGDLGPA
GNPGSPGYPGAKGDAGLPGLPGTPGSLGPPGPPGLAHVGPKGNPGAPGFPGKAGGPGPVG
PQGPPGPGGYRGEKGALGAPGTSGFPGAKGERGAPGFSGSPGLPGPAGLKGDVGLPGVPG
FPGVKGQSGIPGSSGTPGEPGDSGLPGLPGDPGPVSAPIVLKGERGPPGGSGIPGGRGPP
GPPGLNGLSGSPGSPGDPGPDGPPGFNGPSGRKGDTGPAGEPGQPGFPGPPGPDGTQGPP
GLPGSSTGAHGFLVTRHSQSTDVPFCPDGTSLIYDGYSLLYVQGNERAHGQDLGTAGSCL
RRFSTMPFMFCNINNVCNFASRNDYSYWLSTPQPMPMNMAPITGDTIKPFISRCAVCEAP
AMVIAVHSQTVQLPSCPRNWEPLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFI
ECHGRGTCNYYGNSYSFWLATVDINDMFRKPPSETLKEGNLRTRVSRCVVCMKRT
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacttgtcctggctctgcttttaacgaccctctcctttggggtgcgggactca
gaagcagcggcttgtgctggctgtgcagggtgtgactgcagtggtgtaaaaggaggaagg
ggtgacagaggcacccctgggctaccaggccctccaggggtcccggggttccccggccca
gagggaggcgttgggcccggtggagagaagggtaacgatggaattcctggtgcgactggc
ccaaaaggaatcagaggtcccaccgggctgcctggtttcccaggaaccccaggtgtgccg
ggtctgccgggaagtgacgggccgcctggactgaggggcatcccagggtgcaacgggacg
aagggggatcgtgggatctctgggggttctggccatcctggcatacaggggctgcagggt
cctcctggtttaccaggccccaagggagaacctggtgagattttggggacaccacaacat
tcctcagggagaggagagccaggaactccaggtcaaccaggagtttctggacctccagga
cctccaggacttgctggtccagttggccctcctggcccgtcaggttatgagggacgtcct
gggtctccaggtcctccagggcccaagggtaacatgggcctgaacttccagggcccaaaa
ggagagaagggtctatcaggtttgccaggtcctccgggtcccccgggtataatcggtgaa
cagacgaggccaagggattatgatgtacatagaggagaaaagggtgatcagggcgtgcct
ggccagcctggggaaccgggcctccctggacctccgggtgcgtctggcggctaccgaggc
gagaaaggggaacctggagaagcagggaaacggggcaagccaggcaaagacggagaccca
gggccagcagggtacccgggccagaagggggaggcaggcatcccgggcctgtccggccgt
gatggagagaagggtgaaaaaggggatcgtgggtaccccggggctccagggccggtgatt
ggaggtcatgggggatctggtgccgtcggtcagaaaggtgaaagcggctttcctggaata
cctggggccaaaggagaccgaggaccacaaggcttatcaggacctccgggacagccagga
gcaccaggtggacagggtggaggctctgctgggcagcctggttttccaggggagagggga
cagaagggagactcaggtcagccaggggtctccatacctggacccccaggtagaaatgga
ctgcctggtggccccggagcccctggtccccccggagccccagcagcatcgggcccttgc
ggaaactgccttcctggggccccaggattacctggcctgcagggagagcagggttaccct
ggaggcactggacagaaaggtgaaaagggagacacttgtatcaactgcttctccaacaac
atctccattcctggagcgcccggacccccgggcccccctggattttcaggcaatcccggt
gggccaggggccaaaggggaccgaggttaccctggaccagcagggtcgctcggagcaccg
ggttcgcctgggtcagtgggcgcgcctggacatccaggacagaagggagagcctggaaat
gctatttcggtggagggggttaggggggaaaagggcgacactggattcccagggtcccct
ggcttacctgggctagacggaagaccgggcctcgatggagcacctggagcacctgggccc
aaaggcacatctggatccctgttggtgaaaggtgaacgtgggcccccgggattgcctggg
accccaggtctcccaggagatagaggagcgcaaggtgctcctggatttggcccccaaggg
cccacaggagagaagggtatccagggtacggcagggaggacaggggcaccaggtgtacca
ggtgccaaaggtgaacctggccaaacacggtcagagaaaggtgcacttggacccccagga
cctgctggagaatcaggccttacaggcgctccaggtgcccccggactgcctggggcaccc
ggattcaatggatcacctggagcaaagggggatcctggaattcccggcattggattacca
ggtgctccgggagagaaaggattcccaggagctccagggcagcctggaacgcccggtggc
ccaggccgcccaggattggacggcctccccggatcacccggagcaccaggtggaaagggc
gagcccggatacgggttgccaggtgctcagggtccaccaggattttccggtgctaaagga
gtccctggaccaaagggagaccctggatacccagggggccccggaggccctggccggaat
gggtttgatggaggcccaggacccaaaggtgattcaggtgttcctggcatccctggagct
cgtggatctccaggtgctcctgcttttggtggccaaggcccccctggacctcctggaccc
ccaggacctgcgggtgctccaggatactctgggggacctggtgcgaaaggtgaccctgga
gccccaggactggacatcccagggctgccaggagacagaggtagtcctggtatccctgga
tccccaggacctgtgggcccacctggaccttcagcagggttaggccgagatgggctgcct
ggatttcctggtgccaaaggagacccggggccaattggaccacctggccctcaaggagcc
ccaggacccagcggaggtccaggattccctggtggaaaaggtgacaacggctttcctggg
ctttcgggaggcccaggtggtcctgggcataagggagaaaggggttctcctggtcagcct
ggcgcccctggcccaaccatacaacctatagaagtgaagggagctaagggagatccaggt
ggtccaggtgcgggaggattgccaggacagaaaggtgcccttggtcccccaggtgatgcc
ggaaatccagggttggatggccagccaggtttaccaggacctgcaggcattaaaggagat
cctggagctccaggtctgccagggtcccccggagcacctggagcgaaaggcaacgccgga
gatccaggatacccaggtcccgctggtgtgaagggtgactcaggattgcccggtggctcg
ggtttgcccggacagcctgggtcccccggattccccggtgctaagggtgatgccggcgct
cctgggtttggagctccaggaagtcccggtgtcaagggtgacccaggtcagcctggattt
ccagggggtccaggacctaaaggagaggctggtagctcaggtctgcccggactgcctggt
ggacctggagtcaagggtgaccctggctttcccggacttcaaggtggaccgggagctcca
ggtacgaagggaattgatggaggtccaggtgccccagggctggatggagcccctggtcga
ccaggagagccggggcgccccgggggccctggagccccaggagagaagggccaacccggg
cgagatggcatcccaggacctgcaggactgaagggagacccaggtctgcctggcggtgga
catcctggagcccctggccttcctggactaccgggtccaaagggagatcttggaccagct
ggaaatcctggatcccctggctatcctggggcaaagggagatgcagggctcccaggcctg
cctggtacgccaggtagccttggcccccctgggccccccggtctggcccacgtgggaccc
aaaggtaacccaggggccccgggctttccaggaaaggctggtggcccgggtcctgtaggc
ccccaggggcccccaggtcctggagggtatagaggagagaagggggcacttggagcacct
ggcacatctggcttccctggagctaaaggagagcgaggagcccctgggttttcgggctca
cctggccttcccggacctgcaggcctgaaaggtgacgtggggctccctggagtccctgga
ttcccaggtgtgaagggacagtctggtatccctggatcgtcaggtaccccaggagaaccc
ggagattctggtcttccagggttgcccggtgaccctggcccggtctcagcacccattgtc
ctgaaaggggagcgcggtccccccgggggttctgggatcccaggcggacgagggcctccc
ggacccccagggttaaacgggctgtcgggatcaccaggaagccctggtgacccgggtcca
gatggccctccagggttcaatggcccctcaggacgcaaaggagacacagggccagctgga
gaaccaggtcagcctgggttcccaggccctccaggcccagatgggacccaggggccccca
ggcctgcccggatcgtccactggggctcatggtttcctagtcacccgacacagtcagtcc
acggacgttcctttctgcccggatggcaccagcctgatatacgatggctactcactgctg
tacgtgcagggcaacgagagggcccatgggcaggacttgggaacggctggcagctgtctg
cgcaggttcagcaccatgcccttcatgttctgcaacatcaacaatgtctgcaacttcgcc
tcccgcaatgactactcctattggctgtccacaccccagcccatgcccatgaacatggcg
cccatcaccggtgacaccatcaaacccttcatcagcaggtgtgcggtgtgtgaggctcct
gcaatggtgatcgctgtgcacagccaaacggtccagcttccttcctgtccacgaaactgg
gagccactgtggatcggatactcattcatgatgcacacaagtgccggggcggaggggtca
ggtcaggccctggcgtctcctggatcctgtctggaggagttccgctccgcccccttcatt
gagtgtcatgggcgtggcacctgcaattactatggcaactcctacagcttctggcttgcc
actgtggatattaatgacatgttcaggaaaccgccctcggagacgctaaaggaagggaac
ctgcgcacgcgcgtcagccgctgcgtggtgtgtatgaagaggacgtaa
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