Anguilla rostrata (American eel): 135262556
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Entry
135262556 CDS
T10705
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04270
Vascular smooth muscle contraction
arot04625
C-type lectin receptor signaling pathway
arot04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135262556 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135262556 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
135262556 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arot04131
]
135262556 (arhgef12b)
Membrane trafficking [BR:
arot04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135262556 (arhgef12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
NTS
Motif
Other DBs
NCBI-GeneID:
135262556
NCBI-ProteinID:
XP_064205639
LinkDB
All DBs
Position
9:complement(19977577..20061113)
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AA seq
1455 aa
AA seq
DB search
MSGTQSTITDRFPKKATRASSILSKDHPPDKKPKSDKQTTPPSHEFDPTELLAQRSGSVA
EGKAEPCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSEGEGDVGLPSATSPHSPGPAGG
DRTSSTSSPSDRITAPLPVWEENNIVHSQKVDILQKMLTKEQQDLQAMKEEYSRNPTPKL
LKGIQEAKKHIPQLQGQLSKATGGTQDGLPSPRPGDVLHLSEAEDGSTGDADQILSSRSD
SWANSTPVTPSLPSTFPESPCQRDTPCNSPKTTPRDSLNSCPSPETEDMPDPDSHSQSSV
GSPSPRLAPQIIGAEDDYFDTEQEQINGQCSCFQSIELLKSRPAHLAAFLHHVVSQFEPA
PLLCYLYADLYKQTNSKETRRIFMDFHTFFMDRAANLKVAVPESIASELERRRPELIPEE
LHRQYVQVLQDSLVPDIQKNLEDFRQKRSMGLTLAEAELVRLDTERVRDRVALERERSCA
EHIISKIEEVLLTSQPTEEEKCSTMQFVILTYMKQLGVRVKEPRGLEPKRVRIHFLPKIK
KSIKIEKEGEEKVKKPRFPSILGPPRRPSRIDAPSIGRAMEINKPRPQKQLSQPAMNITR
RHHSSLSYSHTQSPEGGGRDSDSGLTPSSALPRVGEGLHTSDALDGTPHTPSTHFDFSSC
SVEQRQDEERDSDRAPDGGTPRPIRRMDTLGSAELQSEDDQGNETELEQDPPNWQQLVSR
EVLAGLTPHEIKRQEVINELFYTERAHLRTLKVLDSVFCQKLTREAILPAADIKNIFTNL
EEIVQLHVSISDQMSAIRKKTETTVVDLIGDDLLSWFGGGEEEKIKRAVGTFCSNQPFAL
ELIKTRQKKDTRFSSFMLEAESNRLCRRLQLKDIIPAEMQRLTKYPLLLENIAKYTEDAE
EKEKVKRAGECCRQILNYVNQAVKEAENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDL
TKRKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLVLKCHSKNLAGTADTKHI
FSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAQTVSEQRTWQCLITQRADSMK
TKAHNVIPLPQTDGERDAVEMIGAGVKLNKDPDRTSTGSIQSPEKDGSASSAGVTQTPPP
GSNPFEEIKAEEEGAELEREGEEVPYLEPDLADRLPFLPQRSRQGVAVDDDDADPFCLPP
SRAEEALRTLATLRQVLVSQMMAQEEGERAGRAGGGGRLLRTTSLRGPMESTGARVSSAP
LRSPENGGGREEAARALASGDTGFFESSEDCAGSYMVLEGYGGLGESSTDEDLQGGEKEL
GARWVSAADSGIDLKKLLSASSQPGGAPNLGRQVMTHLRVLQASLQYLKDVENRYNQLRQ
SMAAATDTDENKDKS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtctacaatcactgacaggtttcccaaaaaagcgaccagggcaagt
agcattctcagcaaggaccaccccccagacaagaagcccaagagtgacaaacagaccacg
cccccttcgcatgagtttgaccctacagagctgctggcacagaggagcgggagtgtagcc
gaggggaaggcagagccctgtgggctcgtccagcgatgtgtgatcattcagaaagatgag
aatggctttgggctgaccgtgagcggagacaaccccgtgttcgtccagctggtcaaagag
gatggcgccgcaatgcgggctggcgttcagaccggtgacaggatcattaaggtgaacggg
accttagtgacgcattcaaaccatgtggaagtcgtgaagctgattaagtcgggctcctat
gtggccctcacggttttggggcggcccccgggcttgccccagatccccctgtcggagggc
gagggggacgtcgggctgccctccgcgacgtcgccgcactctccgggcccggccgggggg
gaccgcacctccagcacctccagcccctccgacaggatcaccgccccgctgcccgtctgg
gaagagaataatatcgttcactcccagaaggtggacatcttgcagaagatgctgaccaag
gagcagcaggatttacaggccatgaaggaggagtacagcaggaaccccactcctaaacta
ctgaagggcattcaggaagccaagaagcacattccacagctacagggccagctgagcaag
gccaccgggggcacgcaggatggccttccttcccctcggccaggggatgtgctgcatttg
agcgaagctgaagatggcagcacaggcgatgcagatcagatactctcctcacgcagcgat
agctgggccaacagcacccctgtcactcccagcctgccctccaccttcccagagagcccg
tgccaaagagacacgccctgtaacagcccaaagaccacgcccagggacagcctcaactcc
tgcccctcccccgaaacagaggacatgcccgacccggactctcactcccagtccagtgtg
ggaagcccctccccccgcctcgccccgcagatcattggcgcggaggatgactactttgac
actgagcaggaacagataaatggccagtgtagttgtttccagagtattgagctgctgaaa
tctcgccctgctcacctggctgccttcctccaccacgtggtctcacagttcgaacccgcc
ccgctgctctgctacctctacgctgacctgtacaaacagaccaattccaaagagacccgt
cggatcttcatggacttccacacgttcttcatggaccgagccgcgaatcttaaagtcgcc
gtaccagagtccattgcctctgaactggagcggcggagaccggagctgattccggaggag
ctccacaggcagtatgtgcaggttctgcaggacagtctggtccccgacatacagaaaaac
ctggaggacttcaggcagaagcgcagcatgggcctgacgctggccgaggcggagctcgtg
cggctggacacggagcgggtcagagaccgcgtggcgctggagagggagcgctcctgcgcc
gaacacatcatctccaagatcgaggaagtgctgctgacgtcacagcccacagaagaggag
aagtgcagcaccatgcagtttgtcatcctgacctatatgaagcagctgggtgtgagggtg
aaggagccccggggcctggagcccaaacgagtccgcatacatttcctgcccaagataaag
aagagcataaagattgaaaaagaaggggaagagaaagtgaagaagcctcgatttcccagc
atcctcggtcctcccaggcgacccagtcgaatcgacgccccctcgataggcagagccatg
gagattaataagccgcggccgcagaagcagctgtcccagccagcgatgaacatcacccgg
cgccaccactcctccctcagctactcgcacacccagagccccgagggaggcggccgcgat
tcggacagcggcctcacgccctcctccgccctccccagggtgggcgagggcctgcacacg
agcgacgccctggacggcacgccccacacgcccagcactcacttcgacttcagctcctgc
agcgtggagcagaggcaggacgaggagcgcgacagcgacagggctccggacgggggcaca
cccaggcccatcaggagaatggacactctgggcagtgctgagctccagagcgaggatgac
cagggtaatgaaacggagctggagcaggacccgcccaactggcagcagctcgtgagccgg
gaggtgctggctgggctcacgccgcacgagatcaagagacaggaagtcatcaacgagctg
ttctacacggagcgtgctcacttgcgcacgctcaaggtgctggacagtgtgttctgtcag
aagctcaccagagaagccatccttcctgctgcagacatcaagaacatcttcaccaacctg
gaggaaatcgttcagctgcacgtttccatatctgaccagatgagtgcgatcaggaagaag
accgagacgacggtcgtggacctgataggagacgacctgctgtcctggttcggcggcggc
gaggaggagaagatcaagcgagcggtcggcaccttctgcagcaaccagcccttcgccctg
gagctcatcaagacccggcagaagaaggacacgcgcttctcctccttcatgctggaggcg
gagagtaaccgcctgtgccgcaggctccagctgaaggacatcatcccggccgagatgcag
aggctcaccaagtaccccctcctcctggagaacatcgccaagtacacagaggatgctgag
gagaaggagaaggtcaagagggcaggggagtgctgtagacagatactcaactatgtcaac
caggctgtgaaagaagctgagaacaaacagaggctggaagactaccagagaaggctagac
ctgtcatcattgaaacagagcgagaaccccatgatctcggagttcaagaatctggacttg
accaagaggaagatggtgcatgagggacctctctcctggaaggtcaacaaagataagaca
atcgagctgtacacgctgctcctggaggacatcctggtgctgctgcagaagcaggacgag
cgcctggtgctcaagtgccacagcaagaacctggcaggcacggccgacaccaagcacatc
ttcagccccatcatcaagctcaacaccgtgctggtgcgctccgtcgctacagacaacaaa
tccttctttgtgctgtccatgtccgataacggagcccagatctatgagctgatggcgcag
actgtgtccgaacagagaacgtggcagtgtctgatcacgcaaagggcggactccatgaag
acgaaagcgcacaatgtcattcctttacctcagacggacggggagcgcgacgcagtggag
atgatcggcgccggagtcaaactgaacaaggacccggaccgcacttccaccggaagcatc
cagtcccctgagaaggatggcagcgcctcttccgcaggggtgacgcagaccccgcccccg
gggtccaaccccttcgaggagatcaaagcggaggaggaaggggcggagctggagcgggag
ggggaggaggtgccgtacctggagcccgacctcgccgacaggctgcccttcctgccgcag
aggtcgcgccagggcgtggccgtggacgacgacgacgccgaccccttctgcttgcccccc
tccagagcggaggaggccctgcgcaccttggctactctacggcaggtcctggtaagccag
atgatggcccaggaggagggcgagagggcggggcgagccggcgggggcgggcggctcctg
aggaccacctccctgaggggccccatggagagcacgggggcccgggtgtcctcggccccg
ctccggtccccggagaacggaggcgggagggaggaggcggctcgagcgctggcctccggg
gacacgggcttcttcgagagctcggaggactgcgcaggtagctatatggttctggaagga
tacgggggcttgggggagagcagcaccgatgaggacctccagggcggcgagaaagagctg
ggagctcgatgggtctcggcggcagactccgggatcgacctgaagaagctgctctcagcc
tcctcgcagccagggggcgcccctaacctcggccggcaggtcatgacacacctgcgcgtg
ctgcaggccagcctgcaatacctgaaggatgtggagaacagatataaccaactacgccaa
agtatggcagcagctactgacacagacgagaacaaagacaagagttag
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integrated database retrieval system
