KEGG   Anguilla rostrata (American eel): 135262660
Entry
135262660         CDS       T10705                                 
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135262660 (ddx46)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arot03041]
    135262660 (ddx46)
Enzymes [BR:arot01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     135262660 (ddx46)
Spliceosome [BR:arot03041]
 Complex A
  U2 snRNP components
   U2 related factors
    135262660 (ddx46)
 Complex B
    135262660 (ddx46)
SSDB
Motif
Pfam: DEAD Helicase_C KH_12 KH-I_KHDC4-BBP CdAMP_rec
Other DBs
NCBI-GeneID: 135262660
NCBI-ProteinID: XP_064205812
LinkDB
Position
9:complement(2343166..2357972)
AA seq 1052 aa
MGRESRHYRKRSASRGRSGSRSKSRSPEKRSKREDRASSRNRERDRGRRERSRSRERRRS
RSRDRKRPRRSRSRERRRSRSRERRRSRSRHRSRSASPSKSRKNDDRSKSKERSDNNEQT
TEKKKIKEEKEEEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRRKAMENIGELKKELEE
MKQGKKWSLEDDEDDDEEALAPAEAEEEEEEAAAAPEEAAPMEEETGEELDPLDAYMEEV
KEEVKKFNMGSMRGGNDKKGGMKVTKVMTVLTTKKAPHTTKKKGELMENDQDAMEYSSEE
EEVDLQTALTGYQTKQRKVLEPVDHQKIEYDPYRKNFYVEVPELAKMTPEEVNVYRLELE
GIMVKGKGCPKPIKTWVQCGTSMKILCALKKHGYEKPTPIQTQAIPAIMCGRDLIGIAKT
GSGKTIAFLLPMFRHILDQRPLEESEGPIAVIMTPTRELALQITKECKKFSKLLNLRVVC
VYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVVDEADRMFDMG
FEPQVMRIVDNIRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVI
VIDEESKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDR
DSIINDFKNGACRLMVATSVAARGLDVKHLILVVNYNCPNHYEDYVHRAGRTGRAGNKGF
AYTFITEDQVRYAGDIIKALELSGSPVPKELEQLWLNFKDQQKAEGKSIRSSSGFSGKGF
KFDETEHALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDLSAPGGGGG
GGGGGGGGSAAAAAGLAGLAIPSAGNIQKLEIAKRLALKINAQKNLGAEAQDVMQQATNA
ILRGGTILAPSVSAKTIAEQLAEKINAKLNYIPVEKMEEERQNAEQSETIKRYEEELEIN
DFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQ
KAKAEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgggacgagagtcgaggcactaccggaagcggtcggcttcgcggggtcgttcggggagt
cggtcgaagagccggtctccggagaagcgctcgaagcgcgaggacagggctagttcccgc
aaccgcgaacgcgaccgcggccggagagaacggtcgcgcagcagagagcgtcgccgctcg
cgctccagagaccggaagcgtcccaggcgatccaggagccgggagagaaggcgaagccgc
agtcgcgagcggaggaggagcaggagccgacacaggtcccgctcggccagcccaagcaag
agcaggaaaaacgacgacaggtccaaaagcaaggaaaggtcagacaacaatgaacagact
acagagaagaaaaagataaaggaagaaaaggaggaagagaaggttgaagatcaagacttt
gaccagaacaagctggaggaggagatgaggaagaggaaggagcgcgtggagaagtggagg
gaggagcagaggaggaaggccatggagaacatcggggagctgaagaaggagctggaggag
atgaagcaggggaagaagtggagtctggaagacgatgaagatgacgacgaagaggcactg
gctccagcagaggcagaggaagaggaggaggaggcagcagccgcccccgaggaggccgcg
cccatggaagaggagactggcgaggagctggaccccctggacgcgtacatggaggaggtg
aaggaggaggtgaagaagtttaacatgggcagcatgagaggagggaacgacaagaagggg
ggaatgaaggtgaccaaggtgatgacggttttaaccacaaagaaggcgcctcataccacc
aaaaagaaaggagaactgatggagaacgaccaggacgccatggagtactcttctgaggag
gaggaggtggacctgcagacggcgctgaccggctaccagaccaagcagcggaaggttctg
gagcccgtggaccaccagaagatcgagtacgacccgtaccgcaagaacttctacgtggag
gtgccggagctggccaagatgacgccggaggaggtgaacgtgtaccgcttagagctggag
gggatcatggtgaagggtaaaggctgccctaagccaatcaaaacctgggtgcagtgcggc
acctccatgaagatcctatgtgcgctcaaaaagcacggttacgagaagcccacgcccatc
cagacccaggccatacccgccatcatgtgcgggcgtgacctcatcgggatcgccaagacg
ggaagcgggaagaccatcgccttcctcctgcccatgttccgccacatcctggaccagagg
cccctggaggagtctgagggccccatcgcggtaatcatgacccccaccagagagctggcg
ctgcagatcaccaaagagtgcaagaagttctccaaactactgaacctgagggtggtgtgt
gtgtatggcggcactgggatcagtgagcagatcgctgagctgaagagaggagcggagatc
atcgtctgtacgccagggcgaatgattgatatgttaggtgccaacagtggtcgggtgacc
aatctccggcgggtcacgtacgtggtggtggacgaagcggaccgaatgtttgacatgggg
ttcgagccgcaggtaatgcgcattgtggacaacatcaggcccgaccggcagacggtcatg
ttctccgccaccttcccgcgagccatggaggcgctggcgcggaggatcctctccaaaccc
atcgaggtgcaagtgggaggccgcagcgtggtgtgctccgacgtggagcagcacgtgatc
gtgatcgatgaggagagcaagttcctgaagctgctggagatcctaggccattaccaggag
aagggctcggtcatcatcttcgtggacaagcaggagcacgcggacgggctgctgaaggac
ctgatgaaggcctcctacccctgcatgtccctgcacggagggatcgaccagtacgacagg
gacagcatcatcaacgacttcaagaacggggcgtgccgactcatggtggccacgtccgtg
gccgctcggggcctggacgtcaagcacctcatcctggtggtgaactacaactgccccaac
cactacgaggactacgtccaccgggccggacggaccgggagggctgggaacaaggggttt
gcgtacacgttcatcacggaagaccaggtgcgatacgccggggacatcatcaaggctctg
gagctgtccgggtcccccgtgcccaaggagctggagcagctctggctcaacttcaaagac
cagcagaaagcggaggggaagagcatcaggagcagcagcggcttttcggggaagggcttc
aagttcgacgagacggagcacgccctggccaatgagaggaagaagctgcagaaggccgcg
ctgggcctgcaggactctgacgacgaggacacggcgctggacatcgacgagcagatcgag
agcatgttcaactccaagaagagggtgaaggacctgtctgcgcccgggggcgggggcggc
gggggtggcggagggggcgggggctccgcggcggcggcggcaggactggccggcctcgcc
ataccctccgccggaaacatccagaagctggagatcgccaagaggctcgccctcaaaatc
aacgcccagaagaacctgggggcggaggctcaggatgtgatgcagcaggccaccaacgcc
atcctgagggggggcacgatactggcgccctcggtctccgccaagaccatcgcggagcag
ctggcggagaagatcaacgccaagctgaactacatccccgtggagaagatggaggaggag
cggcagaacgccgagcagtccgagaccatcaagcgctacgaggaggagctggagatcaac
gacttcccccagacggccaggtggaaggtcacctctaaggaagcgctgcagaggatcgga
gagtactctgaggcggccatcaccatccgagggacctacttcccgcccggcaaggagccc
aaagagggggagcggaagatctacctggccatcgagagtgcgaacgagctggctgtgcag
aaggcgaaggctgagatcacccggctcatcaaagaggagctcatcagattacaaaactcc
taccagccaaccagcaaaggaagatacaaggtcttgtag

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