Anguilla rostrata (American eel): 135262660
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Entry
135262660 CDS
T10705
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135262660 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135262660 (ddx46)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135262660 (ddx46)
Spliceosome [BR:
arot03041
]
Complex A
U2 snRNP components
U2 related factors
135262660 (ddx46)
Complex B
135262660 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
135262660
NCBI-ProteinID:
XP_064205812
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All DBs
Position
9:complement(2343166..2357972)
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AA seq
1052 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPEKRSKREDRASSRNRERDRGRRERSRSRERRRS
RSRDRKRPRRSRSRERRRSRSRERRRSRSRHRSRSASPSKSRKNDDRSKSKERSDNNEQT
TEKKKIKEEKEEEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRRKAMENIGELKKELEE
MKQGKKWSLEDDEDDDEEALAPAEAEEEEEEAAAAPEEAAPMEEETGEELDPLDAYMEEV
KEEVKKFNMGSMRGGNDKKGGMKVTKVMTVLTTKKAPHTTKKKGELMENDQDAMEYSSEE
EEVDLQTALTGYQTKQRKVLEPVDHQKIEYDPYRKNFYVEVPELAKMTPEEVNVYRLELE
GIMVKGKGCPKPIKTWVQCGTSMKILCALKKHGYEKPTPIQTQAIPAIMCGRDLIGIAKT
GSGKTIAFLLPMFRHILDQRPLEESEGPIAVIMTPTRELALQITKECKKFSKLLNLRVVC
VYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVVDEADRMFDMG
FEPQVMRIVDNIRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVI
VIDEESKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDR
DSIINDFKNGACRLMVATSVAARGLDVKHLILVVNYNCPNHYEDYVHRAGRTGRAGNKGF
AYTFITEDQVRYAGDIIKALELSGSPVPKELEQLWLNFKDQQKAEGKSIRSSSGFSGKGF
KFDETEHALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDLSAPGGGGG
GGGGGGGGSAAAAAGLAGLAIPSAGNIQKLEIAKRLALKINAQKNLGAEAQDVMQQATNA
ILRGGTILAPSVSAKTIAEQLAEKINAKLNYIPVEKMEEERQNAEQSETIKRYEEELEIN
DFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQ
KAKAEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagagtcgaggcactaccggaagcggtcggcttcgcggggtcgttcggggagt
cggtcgaagagccggtctccggagaagcgctcgaagcgcgaggacagggctagttcccgc
aaccgcgaacgcgaccgcggccggagagaacggtcgcgcagcagagagcgtcgccgctcg
cgctccagagaccggaagcgtcccaggcgatccaggagccgggagagaaggcgaagccgc
agtcgcgagcggaggaggagcaggagccgacacaggtcccgctcggccagcccaagcaag
agcaggaaaaacgacgacaggtccaaaagcaaggaaaggtcagacaacaatgaacagact
acagagaagaaaaagataaaggaagaaaaggaggaagagaaggttgaagatcaagacttt
gaccagaacaagctggaggaggagatgaggaagaggaaggagcgcgtggagaagtggagg
gaggagcagaggaggaaggccatggagaacatcggggagctgaagaaggagctggaggag
atgaagcaggggaagaagtggagtctggaagacgatgaagatgacgacgaagaggcactg
gctccagcagaggcagaggaagaggaggaggaggcagcagccgcccccgaggaggccgcg
cccatggaagaggagactggcgaggagctggaccccctggacgcgtacatggaggaggtg
aaggaggaggtgaagaagtttaacatgggcagcatgagaggagggaacgacaagaagggg
ggaatgaaggtgaccaaggtgatgacggttttaaccacaaagaaggcgcctcataccacc
aaaaagaaaggagaactgatggagaacgaccaggacgccatggagtactcttctgaggag
gaggaggtggacctgcagacggcgctgaccggctaccagaccaagcagcggaaggttctg
gagcccgtggaccaccagaagatcgagtacgacccgtaccgcaagaacttctacgtggag
gtgccggagctggccaagatgacgccggaggaggtgaacgtgtaccgcttagagctggag
gggatcatggtgaagggtaaaggctgccctaagccaatcaaaacctgggtgcagtgcggc
acctccatgaagatcctatgtgcgctcaaaaagcacggttacgagaagcccacgcccatc
cagacccaggccatacccgccatcatgtgcgggcgtgacctcatcgggatcgccaagacg
ggaagcgggaagaccatcgccttcctcctgcccatgttccgccacatcctggaccagagg
cccctggaggagtctgagggccccatcgcggtaatcatgacccccaccagagagctggcg
ctgcagatcaccaaagagtgcaagaagttctccaaactactgaacctgagggtggtgtgt
gtgtatggcggcactgggatcagtgagcagatcgctgagctgaagagaggagcggagatc
atcgtctgtacgccagggcgaatgattgatatgttaggtgccaacagtggtcgggtgacc
aatctccggcgggtcacgtacgtggtggtggacgaagcggaccgaatgtttgacatgggg
ttcgagccgcaggtaatgcgcattgtggacaacatcaggcccgaccggcagacggtcatg
ttctccgccaccttcccgcgagccatggaggcgctggcgcggaggatcctctccaaaccc
atcgaggtgcaagtgggaggccgcagcgtggtgtgctccgacgtggagcagcacgtgatc
gtgatcgatgaggagagcaagttcctgaagctgctggagatcctaggccattaccaggag
aagggctcggtcatcatcttcgtggacaagcaggagcacgcggacgggctgctgaaggac
ctgatgaaggcctcctacccctgcatgtccctgcacggagggatcgaccagtacgacagg
gacagcatcatcaacgacttcaagaacggggcgtgccgactcatggtggccacgtccgtg
gccgctcggggcctggacgtcaagcacctcatcctggtggtgaactacaactgccccaac
cactacgaggactacgtccaccgggccggacggaccgggagggctgggaacaaggggttt
gcgtacacgttcatcacggaagaccaggtgcgatacgccggggacatcatcaaggctctg
gagctgtccgggtcccccgtgcccaaggagctggagcagctctggctcaacttcaaagac
cagcagaaagcggaggggaagagcatcaggagcagcagcggcttttcggggaagggcttc
aagttcgacgagacggagcacgccctggccaatgagaggaagaagctgcagaaggccgcg
ctgggcctgcaggactctgacgacgaggacacggcgctggacatcgacgagcagatcgag
agcatgttcaactccaagaagagggtgaaggacctgtctgcgcccgggggcgggggcggc
gggggtggcggagggggcgggggctccgcggcggcggcggcaggactggccggcctcgcc
ataccctccgccggaaacatccagaagctggagatcgccaagaggctcgccctcaaaatc
aacgcccagaagaacctgggggcggaggctcaggatgtgatgcagcaggccaccaacgcc
atcctgagggggggcacgatactggcgccctcggtctccgccaagaccatcgcggagcag
ctggcggagaagatcaacgccaagctgaactacatccccgtggagaagatggaggaggag
cggcagaacgccgagcagtccgagaccatcaagcgctacgaggaggagctggagatcaac
gacttcccccagacggccaggtggaaggtcacctctaaggaagcgctgcagaggatcgga
gagtactctgaggcggccatcaccatccgagggacctacttcccgcccggcaaggagccc
aaagagggggagcggaagatctacctggccatcgagagtgcgaacgagctggctgtgcag
aaggcgaaggctgagatcacccggctcatcaaagaggagctcatcagattacaaaactcc
taccagccaaccagcaaaggaagatacaaggtcttgtag
DBGET
integrated database retrieval system