Anguilla rostrata (American eel): 135262856
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Entry
135262856 CDS
T10705
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135262856 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135262856 (dhx16)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135262856 (dhx16)
Spliceosome [BR:
arot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135262856 (dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
135262856 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
Flavi_DEAD
Cas3-like_C_2
PWI
nSTAND3
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
135262856
NCBI-ProteinID:
XP_064206249
LinkDB
All DBs
Position
1:complement(65830813..65842583)
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AA seq
1053 aa
AA seq
DB search
MANLEQWVNDRLHDILGLSDKYVAQFMIGSARRSSGPQDFVSRLRETGTIDIDQRVVAFA
EELYNKIPRKQAVEKPARAREREILEIERKNRTYTLLEDSESEEEVVKERVKEKKKDKDR
GKKRKHLRQKREESPSSSEEEKNKSKRPDAEQKKDAEKEEEEEEWEKEERERLQDLEERD
AFAERMKQKDKDKTRHILERNDKKAYEEAQKRLKMAEEDQRKMLPELRKESRQKYLSTRA
QEKLEDLEAEIADDEYLFSSQPLTDREKQDLQYKRTVRDLAKEYKKAGAKEKEERKNRYY
MPEESRSKTVPQRDLELEPEEGGREGGGEQGRWEEERLSAAALHFGAKEERERGMKAEME
KYQLVLEEEEMISFVSAVTMKGTRMSKEQSEPVMSQAEQQRESIQEVRRSLPVFPYREDL
LSAIHHHQILIIEGETGSGKTTQIPQYLVEEGYTKGGMKIGCTQPRRVAAMSVAARVAQE
MDVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLH
TDILFGLIKDIARFRSDLKVLVASATLDTERFSCFFDDAPVFRIPGRRFPVDIFYTKAPE
ADYLEACVVSVLQIHVTQPTGDVLVFLTGQEEIEACCELLQERCRRLGSKISELIVLPIY
ANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMES
LIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKNEMEETTVPEIQRTNLGNVVLLLK
SLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAELPVDPMLSKMI
LASEQYKCSEEVLTISAMLSVNNSIFYRPKDKVVHADNARQNFVVPGGDHMVLLNVYTQW
VESGYSTQWCYENFIQFRSMKRARDVREQLEGLMDRIEVEVCSCQGDSMPIRKAVTAGYF
YHTARLSKGGYKTVKHQQTVYVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIDSGWL
LEVAPHYYKSKELEDSSSKKMPRKQGKAREELG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctggagcaatgggtaaatgaccgtctccacgacatcctgggtttgagtgac
aagtatgtggcccagttcatgattggctcagcacgcaggtcatctggacctcaagacttt
gtttctcgtcttcgggaaacgggcaccattgacatagaccagagagtggttgccttcgca
gaggaattatataacaagataccccggaaacaagctgtggagaaaccagcccgggcgaga
gagcgagaaatcctagagatagagagaaagaaccgcacttataccttgctggaggacagt
gagagtgaagaagaggtagtgaaggagcgggtgaaggagaagaaaaaggacaaggacaga
gggaaaaagagaaagcacctgaggcagaaaagggaagaaagtccatcttccagcgaagaa
gagaagaacaagagtaagagacctgatgctgaacaaaagaaggatgcggagaaagaagag
gaggaggaggaatgggagaaggaggagagagaacgactgcaggacctggaagaaagggat
gcctttgctgagagaatgaaacagaaggacaaggataagaccagacacatactggagagg
aacgacaaaaaggcctacgaggaagcccagaagcgactgaagatggctgaggaggaccag
agaaaaatgctcccagagctgaggaaggaatcccggcagaagtacctgtccacgcgagca
caggagaagctggaggacctggaggcagagatcgcagacgatgagtacctcttctctagc
cagcccctgaccgacagggagaagcaggatctccagtacaagcgcacggtccgagacctg
gccaaggagtacaagaaggcaggggccaaagagaaggaggagaggaagaacagatattac
atgccagaggagagcaggagcaagacggttccccagcgagacctggagctggagccggag
gagggggggcgcgagggcgggggggaacagggccgctgggaggaggagaggctgagcgcg
gccgccctgcactttggggccaaggaggagagggagcgagggatgaaggccgagatggag
aagtaccagctggtgctggaggaggaggagatgatcagcttcgtcagcgccgtcaccatg
aagggaacgcggatgtccaaggagcagagcgagcctgtcatgtcgcaggccgagcagcag
agagagtccatccaggaggtgcgccgcagcctgcccgtcttcccctacagagaggacctg
ctgtccgccatccaccaccaccagatcctcatcatcgagggcgagacgggctccggcaag
accacgcagatcccccagtacctcgtggaggagggttacacaaagggagggatgaagata
ggatgcactcagccgcggagggtggcggccatgtcagtggcggccagggtggcacaggaa
atggacgtcaagctcggcaatgaggtggggtactcgatcaggttcgaagactgcacctca
gaacgcaccgtgttgaagtacatgacagacggtatgctgctcagggaatttctcactgaa
ccagatcttgccagctacagtgtgattataatcgacgaggcccacgagcgcaccctacac
acagacatcctgttcgggctgataaaggacatcgcccgcttccggtcggacctgaaggtc
ctggtggccagcgccaccctggacacggagcgcttctcctgcttctttgacgacgcgccc
gtcttcagaatccccggcaggaggttccctgtggacatcttctacaccaaggcgcctgag
gcagattacctggaggcgtgtgtggtgtcagtgctgcagatccatgtcacgcagcccact
ggagacgtgctggtctttctcaccggacaggaggagattgaggcttgctgtgagctcctg
caggagaggtgcaggcgtctgggctccaagatctcagagctgattgtacttcctatctat
gcaaacctgccatctgacatgcaagccaagatattcaatccaactcctccaggggccagg
aaggtggtggttgccacaaacattgccgagacctccctcaccattgatgggatcatctat
gtcattgaccctgggttctgtaagcagaagagctacaacgcccggacaggcatggagtcc
ctcatcgtcacgccctgctcacgggcatcggcgaatcagcgcgcagggcgggcaggcaga
gtagctgctgggaagtgcttccgtctctacaccgcctgggccttcaaaaacgagatggag
gagacaactgtgcctgagatccagagaaccaatcttggcaacgtggtcctgctgctgaag
agtcttggaattaatgacctcattcattttgacttcatggatccgccccctcatgagacc
cttgtcctagccctggagcagctttacgcactcggtgccctcaatcaccgtggagagctc
accaagcttggtcgcaggatggcagagttacctgtggaccccatgctgagcaagatgatc
ctggcttctgaacagtataagtgctcagaagaggtattaaccatctctgccatgctgtcg
gtgaataactccatcttctaccggcccaaagacaaggttgtccatgccgacaacgccagg
cagaactttgttgtacctggaggagatcacatggtcctgctgaatgtctatactcagtgg
gtggagagcgggtactccactcagtggtgctatgagaacttcatccagttccgctccatg
aagcgtgcgcgggatgtgcgggagcagctggaggggctgatggacaggattgaggtggag
gtgtgcagctgccagggagacagcatgcccatccgcaaggcggtaactgcggggtacttc
taccacacagcgaggctcagcaaagggggctacaagacggtgaagcaccagcagacggtt
tacgttcaccctaacagctccctgttcgaggagcagccacgctggctcatttaccacgag
ctggtgttcaccaccaaggagttcatgagacaggtgatagagattgatagcggctggctg
ttggaagtggccccgcactactacaagagcaaagagctggaggacagcagcagtaagaag
atgccccgcaagcagggcaaggcacgggaggagctgggctga
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