Anguilla rostrata (American eel): 135263062
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Entry
135263062 CDS
T10705
Name
(RefSeq) RNA-binding motif protein, X chromosome-like isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135263062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135263062
Spliceosome [BR:
arot03041
]
Common components
Common spliceosomal components
hnRNP proteins
135263062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
135263062
NCBI-ProteinID:
XP_064206715
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Position
9:complement(16698549..16705560)
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AA seq
385 aa
AA seq
DB search
MAEADRPGKLFIGGLNTETNEKALEQYFGKYGRIVEVLLMKDRETNKSRGFAFITFESPA
DAKDAVREMHGKSLDGKPIKVEQATKPQFESGGRRGPPSMYPGSRGSLRGGLRGSRGAPG
GMRGPPPRGIVEPFFKGMSPRGPPPLKRGPPIRNGGPPPKRSAPSGPMGRPPMSRERDPY
GPPPPRRDSMMSRRDDYPSPRDDHYSSKDSYSSRDYMSSRDARDYAPPPREYPYRDYPHS
SSRDEYGSMSRSYSDRDGYGGSREPRGYIDRPSAGSYRDPYDSYGNSRSTLPSRGPPSGG
SSRYDDYGSSSRDGYGSRDSYPSSRSDPYSTSRGERMGRQERGPAPPIDRGYPPRDSYSS
SSRGAPRGGGRGGSRVDRGMARSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagaccggccagggaaactcttcattggtggcctgaacaccgaaacaaac
gagaaagcccttgaacagtatttcgggaagtacgggagaattgttgaagtgctgttgatg
aaagaccgagagacgaacaaatcaaggggctttgccttcataacatttgagagcccagct
gatgcgaaggatgcagtgagagaaatgcacggaaagtcccttgatggcaaaccaatcaaa
gtggaacaagcaacaaagccccagtttgagtctggagggcgaagaggccctccttccatg
taccctggttcacgtggctcactcagaggtggtcttagaggatccagaggagcaccaggt
ggaatgagaggcccaccacccagagggattgtagaaccttttttcaaagggatgtcaccc
agaggccctcctcccttgaagagaggacccccaatccgcaatggaggacccccaccgaag
agatcagcaccctcaggaccaatgggcagacctcccatgtcccgtgaaagagatccatat
ggaccacctcctcccagaagagatagcatgatgtccaggagagatgactacccatctcca
cgagatgaccactatagtagcaaagacagttattccagtcgagactacatgagttctagg
gacgccagagactatgctccaccccctcgagagtacccataccgcgactacccacactcc
agttcccgtgacgaatatgggtccatgtcacgcagctacagcgaccgtgacggctacggt
ggaagtcgtgagccgcggggctacattgaccgccccagcgcaggttcctatagagacccc
tatgacagttacggtaactcgcgcagcaccctgccctcaaggggtcccccaagtggcgga
agcagtcgctatgacgactatggcagcagttcccgggatgggtacggcagccgtgacagt
taccccagcagtcgcagtgatccttactccactagccgtggtgagcgaatgggcagacag
gagcgggggccagcccccccgattgatagaggctacccccctcgagattcttacagcagc
tcaagccgtggagcacctcggggaggtggacgtggaggcagtcgcgtcgataggggaatg
gcccgcagcagatactaa
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