Anguilla rostrata (American eel): 135263623
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Entry
135263623 CDS
T10705
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135263623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135263623
Enzymes [BR:
arot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
135263623
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135263623
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135263623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
135263623
NCBI-ProteinID:
XP_064207956
LinkDB
All DBs
Position
9:33122063..33137616
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AA seq
558 aa
AA seq
DB search
MPKEKYDPPDPRRMYTIMSTEEAANGKKSYWAELEISGKVRSLSTALWSLTHLTALHISD
NSLSRIPPDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLAQEIVNLYQEPDGTRRLLNYLLDNLAGTNKRTSTEQPPPRNWIILQEA
DRTRPAALFSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKSIMQEILSCNADIISLQE
VETEQYYHYFLVELKEHGYEGFFSPKSRARTMSESDRKHVDGCAVFFKTEKFSQVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKEVMEQCVGKSVPSMEKQLVLVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIVDKATRSLKLSSISGETNGIPLVLCADLNSLPDS
GVVEYLSTGGVDCTHKDFKELRYIDSLTNFNCNGKNSTSNGRITHAFKLKSAYDNGLMPY
TNYTFDFKGVIDYIFYSQPLLNVLGVLGPLDPQWLHENNISGCPHPHVPSDHFSLFAQLE
LALPYPPPLNGIHLPSRR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaaaatatgacccgccagaccccaggcggatgtacaccataatgtccact
gaagaggcagccaacgggaagaaatcgtactgggcggagctcgagatcagcggtaaagtg
cggagtctgagcacggcattgtggtccctcacccacctcacagcactgcacatcagcgac
aactctctgtcccgcatcccgcccgacatcgccaaattacacaatctggtgtacctcgac
ctttcgtccaataagatcaggagcctgccggccgagcttggcaacatggtgtctctcagg
gaactgcttttaaataacaaccagctgcgggttctgcctttcgaactgggaaagctcttc
cagttacagacactgggactaaaaggaaaccctctagcacaagaaatcgtgaacctgtac
caggaacctgatggaacccgtcgactgctcaactacctgctggacaacctggcgggcacc
aacaaacgcacctccacagagcagccccctccccggaactggatcatactgcaggaagcc
gaccggacacggccggcagctctgttctcagtgatgtgctacaacgtgctctgcgacaag
tacgccacgcgccagctctacggctactgcccgtcctgggccctcaactgggagtacagg
aagaagtccatcatgcaggagatcctcagctgcaacgccgacatcatcagcctgcaggag
gtggagacggagcagtactatcattacttcctggtggagctgaaggagcacgggtacgag
gggttcttcagccccaagtcccgggccaggaccatgtccgagtcggaccgcaagcacgtg
gacggctgtgcggtattctttaagaccgaaaagttcagccaggtgcagaagcacacggtg
gagtttaaccagctggccatggccaactcggagggctcggaggccatgctgaaccgagtc
atgaccaaggacaacatcggcgtggccgtcctgctggagctgcgtaaggaggtgatggag
cagtgcgtggggaagtctgtgcccagcatggaaaagcagctggtcctggtggccaacgcg
cacatgcactgggaccccgagtactcggacgtgaagctggtgcagaccatgatgttcctg
tctgaggtgaagaacatcgtggacaaggccacgcgcagcctcaagctgtcctccatctcc
ggggagaccaacggcatcccgctggtgctgtgcgccgacctcaactcgctgcccgactct
ggcgtggtggagtacctgagcacgggcggggtggactgcactcacaaggacttcaaggag
ctgcgctacatcgacagcctgacaaacttcaactgcaacgggaagaacagcacgtccaac
ggccgcatcacccatgctttcaagctcaagagcgcctacgataatggcctcatgccttac
accaactacaccttcgacttcaagggtgtcattgactacattttctactcccagcctctg
ctcaatgttttgggtgtcctggggcccctggatccccagtggcttcatgagaacaatatc
agcggctgcccacacccccacgtcccctccgatcacttctctttgtttgcacaactggag
ctggccctgccctacccgccgccgctcaacgggatccacctgcccagccgcaggtag
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