Anguilla rostrata (American eel): 135263693
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Entry
135263693 CDS
T10705
Symbol
lig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135263693 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arot03400
]
135263693 (lig3)
Enzymes [BR:
arot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
135263693 (lig3)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
135263693 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
135263693
NCBI-ProteinID:
XP_064208078
LinkDB
All DBs
Position
9:complement(35933945..35951879)
Genome browser
AA seq
1013 aa
AA seq
DB search
MLRLSICRALRTLYIAPLRKQCRNKPYWQTPEPFHFYLCTRFLRHHFVGVLFKPGHSYQY
TQASGPISLSIGQHFRASLTQFSSGWTGMAEQRYCVEYAKRGTAGCKKCKDKIMKGLVRI
GKIVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDEDKELINK
HVGDLAAKTNASPKKKVQAKLNNSGGITAPLADPSVNAPRKFSGFMATKAGTATSPGPSP
AKASQGSMLSAQMCDPTHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLRKGSGGDKFR
GDLYLTVKLLLPGVVKSVYNLNDKQIIKLFSRIFNCSQEEMVRDLEQGDVSETVRIFFEG
SRSFPPAAKSLLTLQEVDASLTRLAQLTKEDDQQKELETISKRCTGNDLKCIIRLVKHDL
KMNSGAKHVLDAVDPNAYDAFKASRNLGDVIDRVLRNQLEASSGSGPRKILSVEATLMTP
VQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKEFIPQAFAGGQSMILDAEVLLIDTNTSKPLPFGTLGVHKKAAFQDAKVCLFVFDCIYF
NGVSLMDKPLYERRKFLQDNMVEVPNRILFSEMKHVTRAADLAEMITRVIREGLEGLVLK
DIKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPDS
KKWCTVTKCSGGYDDATLARLQDELDVIKISKDPRKIPSWLNIIKNYYPDFIIRDPEKAP
VWEITGAEFSKSEMHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYRVSKERCDFEI
TAGSSKSNNDNSSSGGDSGGNSPSTSQTAAMPSKAGSSGAPKAKAVKKVPSPGPAAKRKN
PPEEHSAKKVKRTETVHSNGQSKPKTSQSTESKNEKTLLDIFSGVKLFLPESVQDYQKLR
RYFVAYDGDLVPEYDAASATHTLSEPEEDSQAQRVTANWIWECIRKRRVVPSC
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggcttagcatttgcagggcattacgaacattgtacattgccccactgagaaag
caatgcaggaataaaccttactggcaaactcctgaaccttttcacttctacctgtgcaca
cggtttttgcgtcatcactttgtgggcgtacttttcaaacctgggcacagttatcagtac
acgcaggcatctggacccatcagcctctccattggacagcatttccgtgcctccttgacc
cagttcagcagtggttggacaggtatggcggagcagaggtactgtgtggagtatgccaag
cgcggcacggctggctgcaagaagtgcaaagacaagatcatgaaagggctggtgcgcata
ggtaagatcgtgcccaacccctttagtgagtctgcgggtgagatgaaagagtggtaccat
gtgaaatgcatcttcgagaaacttgagcgggcacgggccacaacgaagaagattgaagac
atcactgacctggaaggctgggaggaactgcaagatgaggacaaagagctaatcaacaaa
catgtgggagatctggctgcgaagacaaatgccagcccaaagaagaaggttcaagcgaag
ctgaacaacagcggcggaataacggcgccccttgctgatccatctgttaatgcccccagg
aagttctctggcttcatggctaccaaagcagggactgccaccagcccaggcccttctcct
gccaaagccagtcaagggagcatgttgtcagctcagatgtgtgaccccacgcacaaggac
tgcttgctcagggagttccgtaagctatgtgccatggtggcagaaaagcccagctacaac
gtaaagacacagatcatccaggacttcctgaggaaaggctctggtggggataagttcagg
ggagacctgtaccttaccgtgaagctgcttctcccaggagtggtcaagagcgtgtacaac
ctgaatgacaagcaaataatcaagctgttcagtcgtatcttcaactgcagccaggaagag
atggtgcgagacttggagcagggagacgtctctgaaacagtgcggatattttttgagggg
agcaggtcgtttccgccagcagcaaaaagtctcctgaccctccaggaagttgatgcttcc
ttgactcgtctggcccagctcaccaaagaagatgatcagcagaaagagctggagaccata
tctaaacgatgcacaggaaatgacctcaaatgtatcataagacttgtgaaacacgacctg
aagatgaactccggagctaagcatgtcctggatgctgtggacccaaatgcctacgatgca
ttcaaggcctctcgtaacctgggagatgttattgatagggtgctgcgaaaccaactggag
gcatccagtggctcagggcccaggaagatcctgagcgtggaggccaccctcatgacacct
gtgcagcccatgctggcggaggcgtgtaaatccatcgaatatgccatgaaaaagtgtccc
aacggaatgtactctgagatcaagtacgatggggagcgtgtgcaggtccacaagaatgga
gatcacttcagctacttcagtcgcagtctcaagcctgtgcttccacacaaggtggcccat
ttcaaagagttcatcccacaggcgttcgcagggggtcaaagcatgatcttagatgcagag
gtgcttcttattgacaccaacaccagcaagcccctcccgttcgggaccctgggtgtccac
aagaaagcagctttccaagacgccaaagtgtgcctgtttgtgtttgactgtatatatttc
aacggtgtgagcctgatggacaagcccctgtatgagcgaaggaagtttctccaagataac
atggtggaggttccaaacagaatcctgttctccgagatgaagcatgtcactagagctgca
gacctggctgagatgatcactcgagttattcgagaggggctagagggactggttttgaag
gatatcaagggcacatatgagcctgggaagcgccactggttgaaggtgaagaaagactat
ctgaacgaaggggccatggcagacaccgctgacctggtggttctgggggctttctacggc
aaaggctcaaacgggggcataatgtccagttttttgatgggctgctatgaccctgactct
aagaaatggtgcacagtgaccaaatgctctgggggctatgacgacgccactctggccaga
ctgcaggatgagctggatgtgatcaagataagcaaggatccacgcaaaatcccaagctgg
ttgaacataatcaagaactactatccagatttcattatccgagatccagaaaaagcccca
gtgtgggagatcacaggggcggagttctctaaatccgaaatgcacacagccgatggcatc
tccatccgcttccctcgctgcaccagaatccgtgacgacaaggactggaaaagtgccact
aacctgccccagctcaaagaactgtacagagtttcaaaggaaaggtgtgatttcgagatc
acagcaggatcttcaaagagcaacaatgacaacagttcctctggcggagatagtggcggg
aactctccctctacttcccaaacagcagccatgcccagtaaggctggaagcagtggtgct
cccaaagcaaaggcagtgaaaaaggtcccctcccccggccctgcagccaagaggaaaaat
cctccagaggaacacagtgcaaagaaggtgaaaaggacagaaactgtacacagcaatggg
caaagcaaaccgaagacttcccaatcaacagaaagcaaaaatgaaaagaccttactggac
atcttcagtggggtgaagcttttcctgccggagtcagtacaggactatcaaaaactgcgc
cggtactttgtggcctatgacggcgacctggtaccagagtacgatgctgcctcagcaacc
cacacgctgtcggagcctgaggaagacagccaagcacagagagtcaccgccaactggatc
tgggagtgcatccggaaacgaagagtggtcccatcctgttga
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