Anguilla rostrata (American eel): 135263897
Help
Entry
135263897 CDS
T10705
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135263897 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arot04131
]
135263897 (rabgef1)
Membrane trafficking [BR:
arot04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135263897 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
135263897 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PIN_8
Sulfotransfer_3
Rep_N
Motif
Other DBs
NCBI-GeneID:
135263897
NCBI-ProteinID:
XP_064208426
LinkDB
All DBs
Position
9:complement(44635460..44653753)
Genome browser
AA seq
538 aa
AA seq
DB search
MSQKSERRGIHVDQSELLCKKGCGYYGNAAWQGLCSKCWREEYQRARQKQIQEDWALAEK
LQREEEAAYASSQGAQSQPSLTPFSKFEEKKTNEKTRKVTTVKKFFSPSSRTAPKKAPSE
KVGKVSVERHGDALLRDLRGMFSQPWEMMSPAEALAGRLRESHEGKTPSPSITRQSSIET
DRVSRDFVDFLKNLQKPGREIHKQSRAFIENMANKKDLGADELSECVQDFYQNMSDRLMT
HFKGSTERVERVMDQVEKYIMTRLYKNVFCPETTDDEKKDLATQHRIRALHWVTIQMLCV
PVDEEIPEVSDNVVKAITDVIEMDSKRVPRDKLACITRCSKHIFTAIKITKNEPASADDF
LPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLN
LSAEDFERYMSGQASPRKQEAEAWPQPGPAGGRSPGLSQAYRSLDQLTGLGARHDRVLEG
ARGLQSDLIGWQESVEREVREILEKYPLEIRPPASAIDSDNVENDRLPPPLQPQVFAG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagtcggagcgcagggggatccacgtggaccagtcggagctcctgtgcaag
aaaggatgcggttactacggcaacgcggcctggcagggcctgtgctcaaagtgctggagg
gaggagtaccagcgcgcccggcagaaacagatccaggaggactgggccctggctgagaag
ttgcagagggaggaggaagcggcctatgccagcagccagggggcgcagtcccagccctct
ctcactcccttctccaaattcgaggagaagaagaccaacgagaagacccgcaaagtcacc
accgtgaagaagttcttcagcccgtcctcgcgcaccgcacccaagaaagcccccagtgag
aaagttgggaaggtgtcggttgagcgccatggagacgctcttctccgggacctgaggggc
atgttttctcagccctgggagatgatgtcacctgccgaagcgctagcgggcaggctgaga
gagtcccacgaggggaagacccccagcccctccatcacccggcagtccagcatcgagacg
gaccgggtctcccgagacttcgtggacttcctgaagaacctgcagaagccgggccgggag
atccacaagcagagccgggccttcatcgagaacatggccaacaagaaggacctgggtgcc
gacgaactgtcggagtgcgtccaggacttctaccagaacatgtccgaccgcctgatgacc
cactttaaagggtccacggaacgcgtggagcgagtgatggaccaggtcgagaagtacata
atgacacgcctgtacaagaacgtcttctgtcccgaaaccacggacgacgagaagaaagac
ctggccacacagcacaggatcagggctctgcactgggtcactattcagatgctgtgtgtc
cccgtcgatgaggagatccctgaggtgtcagacaacgtggtaaaagccatcacagatgtc
atcgagatggactccaagcgcgttccccgggacaagctggcctgcatcacccgctgcagc
aagcacatcttcaccgccatcaagatcaccaagaacgagccggcgtcggccgacgacttc
ctgcccaccctcatctacatcgtcctgaaggccaaccctccgcgcctgcagtccaacatc
cagtacatcacccgcttctgcaaccccagccgcctcatgaccggcgaggacggctactac
ttcaccaacctgtgctgtgcggtggccttcattgagaagctggacgcccagtcgctcaac
ctgagcgccgaggacttcgagcgctacatgtcggggcaggcgtcgccccggaaacaggag
gcggaggcgtggccccagccgggccctgcaggggggaggagccccgggctgagccaggcg
taccggagcctggaccagctgacggggctgggggcgcggcacgaccgggtgctggagggg
gcgcggggcctgcagagcgacctgatcggctggcaggagagcgtggagcgggaggtgcgg
gagatcctggagaagtacccgctggagatccggccgcccgcctccgccatcgactccgac
aacgtggagaacgaccggctgcccccgccgctccagcctcaggtgttcgctggctga
DBGET
integrated database retrieval system
