Anguilla rostrata (American eel): 135263990
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Entry
135263990 CDS
T10705
Symbol
nectin1a
Name
(RefSeq) nectin cell adhesion molecule 1a isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03266
Virion - Herpesvirus
arot04514
Cell adhesion molecule (CAM) interaction
arot04517
IgSF CAM signaling
arot04520
Adherens junction
arot05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
135263990 (nectin1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135263990 (nectin1a)
04517 IgSF CAM signaling
135263990 (nectin1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135263990 (nectin1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135263990 (nectin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arot04515
]
135263990 (nectin1a)
04090 CD molecules [BR:
arot04090
]
135263990 (nectin1a)
Cell adhesion molecules [BR:
arot04515
]
Immunoglobulin superfamily
Nectin family
135263990 (nectin1a)
CD molecules [BR:
arot04090
]
Proteins
135263990 (nectin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Ig_PVRIG
TM_ErbB1
Phage_Coat_B
Motif
Other DBs
NCBI-GeneID:
135263990
NCBI-ProteinID:
XP_064208603
LinkDB
All DBs
Position
9:complement(46948144..47125303)
Genome browser
AA seq
502 aa
AA seq
DB search
MAMAMLPSFWIFLMAVCVPGGGAQTVQMDASKWGFVGSQVELRCLFVNSNPPVKISQVTW
QKFLNGSKQNVAIANPSLGVSVLPPFKDRVSFKQPAVRHHTPSLEDTTITFSNLRLSDEA
AYICEYTTFPAGNRENMVNLTVLARPMTVMTLSAPTIVARSSNRKMTVATCLSANGKPPS
LITWDTRLKGEASVQETRNDNGTVTVLSSYVVVPSRAAHKQRLTCVVSYRNERITDSVVL
NVLYEPEVTVEGFDGNWYLNRQDVLLICKADANPPVTVYQWKLLNGSMPANAEIRNNTLL
FKGPVTNEVAGTYVCDATNSIGTRSGQVEVNVTEFPNIPPPGGHEIPQEQHSSGAAIGGA
VGGVVLLAAAGALLFVFLRRRQRTFKGDYSTKKHVFGNGYSKAGGLPAHPPMPKNLQYPE
DSDDEKKPAQIGGGPGGFEGSERDFDGDAEDLKRPYFTVDEGESRDYDERTLAFQYDPEP
EMADDMVSQTDGSVISKKEWYV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgatgttgccgagtttttggatattcctgatggctgtctgcgtgccaggt
ggcggggcgcagacggtgcagatggacgccagcaagtggggcttcgtgggctcgcaggtg
gagctccgctgcctgttcgtcaacagcaacccgccggtgaagatctcgcaggtcacctgg
cagaagttcctcaacggcagcaagcagaacgtggccatcgccaaccccagcctgggcgtg
tccgtgctgccgcccttcaaggaccgcgtcagcttcaagcagccggccgtgcgccaccac
acgccctccctggaggacaccaccatcaccttctccaacctgcggctctccgacgaggcc
gcctacatctgcgagtacaccaccttccccgcgggcaaccgcgagaacatggtcaacctc
accgtcttggctcgaccgatgaccgtcatgacgctgtcggcgcccaccatcgtggcgcgc
tcgtcgaaccgcaagatgacggtggccacgtgcctctcggccaacgggaagccgccgagc
ctgatcacctgggacacgcggctgaagggcgaggccagcgtccaggagacgcgcaacgac
aacggcacggtgacggtgctcagcagctacgtggtggtgcccagccgcgccgcgcacaag
cagaggctcacctgcgtcgtctcctaccgcaacgagaggatcaccgacagcgtcgtcctc
aacgtcctgtacgagccggaggtgacggtcgagggcttcgacgggaactggtacctgaac
cgccaggacgtgctgctcatctgcaaggccgacgccaacccgcccgtcaccgtgtaccag
tggaagctactgaacggctcgatgcccgccaacgcggagatccgcaacaacacgctgctg
ttcaagggcccggtgaccaacgaggtggcggggacgtacgtgtgcgacgccaccaacagc
atcgggacgcgctcgggccaggtggaggtcaacgtgacggaattccctaacatcccgcca
cccgggggccatgagatcccgcaggagcagcacagctcaggggcggccatagggggcgct
gtggggggagtagtcctgctggcggcggccggcgccctcctcttcgtcttcttgcgtcgg
cgccagcgcaccttcaagggggactacagcaccaagaagcacgtgttcggcaacggctac
agcaaggcggggggcctgcccgcgcacccccccatgcccaagaacctgcagtaccccgag
gactcggacgacgagaagaagccggcccagatcgggggcggcccggggggcttcgagggg
agcgagcgggatttcgacggcgacgccgaggacctgaagaggccctacttcacggtggac
gagggcgagagccgcgactacgacgagcggactctggccttccagtacgaccccgagccc
gagatggcggacgacatggtctcccagaccgacggctccgtcatctcgaagaaagagtgg
tacgtgtag
DBGET
integrated database retrieval system
