Anguilla rostrata (American eel): 135264507
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Entry
135264507 CDS
T10705
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arot04131
]
135264507 (vps13a)
Membrane trafficking [BR:
arot04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
135264507 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
135264507
NCBI-ProteinID:
XP_064209296
LinkDB
All DBs
Position
10:39906727..39949036
Genome browser
AA seq
3191 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLRNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPAASIKYDAEKEEKQLQEARQRELQRIEE
TKQKAAEKDDPKLEKQDTFVEKLVTQVIKNLQVQISNIHIRYEDQVTNPNCPLSFGVSLQ
NLSLQTADENWTPCLLDDKAKLFYKIVRLDSLFAYWNVNSELYSNHMPDEALRCLKDSIA
VQNHIPQDYDFIFRPISARAKLRMNPRSDLDFSAPKVDLVVNLPEVAVELNRLQYVSILE
LLGSVDMMSRNLPYRKYRPDVPVHTNAYQWWRYVITGILEVNVKPALHMWSWKHMRAHRK
KVKRYRELYKIKITSKKPAEDVLRELEEPEKTLDIFNITLARQQAEMEASKAGLRIYRPG
VKVEEEESQGWFGWMWGWSSDSTAPKEVKSGGFDEFMTPAEKARLYTAIGYSETAVNHNL
PKNFEDMKINFQLISMSISIKESKSKPEIIRLAVMDLRALLTQRPGAQAVKLSAQLNSFE
VTGLPRNRRAPTLLSSRTVERASEEPLLSVMFETNPLDACADQRLHVQSQPLEIVYDAVT
VNSMSAFFMPPQELQLDELTSATLMKLEQFRDRTSTGLMYVIETQKVLDLKLNLMASYVI
VPETGFYETAQNLVLLDLGHLKVTSKSRQELPQLCAGRNTLEDIMSRAYDSFDVQLSSLQ
FLYSKMDGDWKSARHQKQSDLHILEPVDVKVLFSRAMVVTDSRMPKFKVSGELPLLSVRI
SDSKLGGVLRLIDSIPLPESHPAPRTTPIPALPKPPRQSYTPQLTPRKPPMADLRSSLIF
ESGSEEELFYDAPSSPLDDRPMFDFPSGGLQRSDSQKRKTLVKKDPKKNMTDFLLTFEIS
QVLVQLCRVSEGREITVLHLDIEGLGTELKLRTFDMSSNTFLREICLKCPEYMDGEEKPV
HLITTLDNTEDDLLTLEYIKADKNAPEFKTFYKNTEQLIKVRMFYSQCQMLSQCELAALG
LVLVTRHLNKSPSVSLSPSPAPKKSKFEDVVNLHIRADLSCLKVFIRGQKARISEISIEG
LVSEVQMKKKAVEISANLKNIVILDCDKDALYKKAVSITGKEVFDFRMVNHVDATEGDAY
SDMSQVDTSVTLTVGCIQVVFLNKFISTILAFINNFQMAKDAVAEATAQAAEKAATGVLE
LAERSTRISLDIDVKAPVVFLPQSSVSRNVIAADFGLVTVQNHFYVVPSKAHAKIPPVID
VMKVGLSDLKMYRTTFEGGRFQTEMQLLKPVNLDLSIRRNLSASWYHSIPDIEITARLKP
MSMVLSQEDMTVVLKTLSENLSETSDAVPPPPPPATDKSDTLSAKDSQTSHPGANTVVTA
AVVETQKSSKLKTTLKLDFQFDSMTLVLYSPNDNEAQLLDLRAEELKLAEFRLGTISTAV
QMYSDSSMKASVKLANCILDDKRQRVKMITARMLEMKPGSDRSVMVEVNYKQGREGTVLD
TQVQDIYLCASMEFLLTVADIFIKASQQGFSAPPKTTKPTASSSKETAPAPPVVAKTEMN
VVVKNPEIVFVADLTRADAPALVMTTQCELLMRSDPEGQSMTAAVRDLKVVACPFLREGR
RNNVTTVLLPCQVFFQSTQSPTSPQAMELSISSLTLKVSPIIINTVITIQSALSPAPETP
QELASPVPPNLWDRKSWQELKLWFLEEDSEEDAQSLVPLVPQGESLRMAISSICLTLEAG
VGHRTVPMLLAKSSFHGDVKNWSTLINLESKLNLEVHYYNEMLGVWEPLLEPLEDEKKDG
FRPWTLGLKMKKKQVKHERESDEVDHTVPDYKTVICISSKDQLNITLSKCGLGMLSNLGT
AFAEAASQTADHFQKDEAPLVVMNRLGLAVSVLHSETFSPIGTASSNHRVELPDGESLNM
DYTSTTTTDQFSAMTSLSSKDYFIQPTPVGHTAASTIPLIKVGRSMLSVVHKDSGVTRYL
VCQIYSAEGSKYVKIRSPFQMINYFSIPFRVFEGSTLLGMALPKEEYCIPLGSYRSVLSL
QPVTETEEEYEVSEGFSYEGLTNHTGQCVQQTCRRSGNPDCVMMINMVPQKDLLTCHGSH
GSEDTFDEPYILQLWPTVLLRNLLPYPLTFSLEENGDHAPSTLQAGHSAQLHLAIVDRSR
LRLRLRDYLTQDWQGEYRLQTGQDEIAFTVFRSVAPDDGLPGAEGVELDIAVHVTYDPGQ
TVVAVHSPYWMVNKTDRLLQYKADDIHRKHPRDYDKPLLFSFKPRNFLQNNKVRLMVSDS
ELSDDFSLDTVGSYGDVKCKGRVKDYLVGVKIDASSFSLTRIVSFVPFYLLVNKTKHTIK
VSEEDEENWTEAPPDQVAVPFWPERDSKKLKVKVEGCHSTPHTVNFHKQENCLLLHLDNT
LGGIIVDVNLTEHSTVIRFSDYHDGAAPFLIINHTKAQTLEFYQSTQKEKDELGPGQAVY
YTWAEPAGSRTLNWKCGNHTGELRNEEDLQLDVDGKGNLFLVSFYEGLQRVALFTEDSRV
YKLLWESEKAEPAEQEVVLSLQEVGVSLVNNNTSQEVSYIGITSSDVVWESNAKKKSRWK
QMSHKDAAQLERHFLEYIENSPVDNLILDLENNMQVSLTPSGKGMKVLQPYLSDLRRNFL
PGVKVEYSVSARQRAYRVQINRIQIQNQLPGAIFPYVFYPIKPPKSVTMESEPKPLTDVS
IVTRSAGHSDISRIKYFKVLIQEMDLKLDLGFLYAIMDLFTPENVGIISSEQEVELFEKD
IEYLKTELNHASATDTSPISLYEYFHISPIKLHLSFSLSSGGDDGNKEKRETEVIPVQSL
NLLLKSIGATLTDVQDVVFKLAFFELQFQFRTTQQLQWEVIRHYSKQAIKQMYVLVLGLD
VLGNPFGLIRGLSEGVEAFFYEPYQGAIRGPEEFAEGMALGVKALVGGAVGGIAGAASRI
TGAMAKGVAAMTMDEEYQQKRREAMNIQPSGLREGLTRGGKGLVSGFVSGITGIVTKPIK
GAQKEGAAGFFKGMGKGLVGAVTRPTGGIIDMASSTFQGIKRATETSQDVESLRPPRFFH
EDGVIRPYKEREGVGSQILQRIENGRFAKYRYFAHAKVNESDFLMITKSCIFFVTKGTFG
QLTCEWQYCFDEFTKEPIIVEGRRLRIEAKERVKSVFHAKEFGKIINFKTPEIATWVLAK
LEDARESLPKY
NT seq
9576 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcgctggtggtggacgtcctgaacaggttcttgggggactacgtggtg
aacctggacagctcacagctaaagcttggaatttggggaggagatgcagtgttaagaaac
cttgaaataaaggaaaatgcactgagtcagttggatattccttttaaagttcgagctggg
cacatagggcggctggagctgaagattccatggaagaacctgtacacccagtctgtggaa
gctacgctggatggagtttacctgctcattgtccccgctgccagtataaaatacgatgcg
gagaaagaggagaagcagctgcaggaggcgaggcagagggagctgcagcggatcgaggag
accaaacagaaagcagcagagaaagacgaccccaagctggagaagcaggacacgtttgtc
gagaagctggtgactcaggtgataaaaaacctgcaggtgcagatctccaacatccacatc
cgatatgaggaccaggtaaccaaccccaactgcccattgtcctttggagtgtcacttcag
aacctcagccttcagaccgcggatgagaactggactccgtgtctgttggatgacaaggcc
aagctcttctacaagatcgttcgcctggacagcctcttcgcctactggaacgtgaactcc
gagctctactccaatcacatgccggacgaggccctgaggtgcctgaaggacagcattgcc
gtgcagaaccacattccgcaggactatgacttcattttccggccgatctcggcccgggcg
aagctgaggatgaacccgcgctcggacctggacttctcagcgcccaaagtggacctggtg
gtcaacctgccggaggtggcggtggagctcaaccggctgcagtatgtgagtatcctggag
cttctggggtccgtggacatgatgtcacgcaacctgccctacaggaagtaccgccctgac
gtgcccgtgcacaccaacgcctaccaatggtggcggtatgtgataacggggatcctggag
gtgaacgtgaagccggccctgcacatgtggtcctggaagcacatgagggctcaccgcaag
aaggtcaagcgctaccgagagctctacaagatcaagatcaccagcaagaagcccgcggag
gacgtcctgcgggagctggaggagcccgagaaaacgctggacatcttcaacatcacgtta
gcgcgccagcaagcggagatggaggcgtcgaaggcggggctcaggatctaccggccgggg
gtgaaggtggaggaggaggagtcccagggctggttcgggtggatgtggggctggtccagc
gacagcaccgccccgaaggaggtcaagtccggagggttcgatgagttcatgacccctgca
gagaaggccaggctctacactgccattggttacagcgagacagctgtcaatcacaacctg
cccaagaactttgaggatatgaagatcaatttccagttgataagcatgtccatttcgatc
aaagagagcaagagcaagccggaaataatcaggctggctgtgatggacctccgggccttg
ttgacacaaagaccgggagcgcaagctgttaagctctccgcgcagctgaactcgttcgag
gtgacgggtctcccgcggaaccggagggcccccaccctgctgtcgtcccgcacggtggag
cgggccagcgaggagccgctgctcagcgtgatgttcgagaccaacccgctggacgcctgc
gccgaccagcgcctgcacgtgcagtcccagccgctggagatcgtctacgacgccgtgacg
gtaaacagcatgtctgcgttcttcatgccaccgcaagagctgcagctggacgagctgacc
tccgccaccctcatgaagctggagcagttcagagaccgcacgtctacaggcctgatgtat
gtcattgagacccagaaggttctggatctgaagttgaacctcatggcatcctatgtcatc
gttcccgaaacgggcttttatgagaccgcccagaacctggtgctactggacctggggcat
ctgaaggtgaccagtaagagcagacaggagctgccccagctgtgcgcggggcggaacacg
ctggaggacatcatgtctcgcgcgtacgacagcttcgacgtgcagctcagcagcctgcag
ttcctctacagcaaaatggacggagactggaagagcgcccggcaccagaagcagtcggac
ctgcacatcctggagccggtggatgtgaaggtgctgttcagcagggccatggtggtgacg
gactccaggatgcccaagtttaaggtttcgggggagctgcccttgctctctgtgcgcatt
tcagacagcaagctggggggcgtcctgcgactgattgacagcatccccctcccggagagc
caccccgccccccgaaccacccccatcccagccttgcccaagcccccccggcagtcctac
accccccagttgacccccaggaagcccccgatggcagacctgcgtagctccctaatcttc
gagtccggctcagaggaggagctcttctatgatgctcccagctctccgttagacgacagg
cccatgtttgatttcccgagcggcgggctccagcgctcagactctcagaagaggaagact
ctggtgaagaaggaccccaagaagaacatgacagacttcctcctgacgtttgaaatcagc
caggtgttggtccagctgtgcagggtgtctgaggggcgtgagatcactgtcctgcacctg
gacatcgagggcctggggaccgagctgaagctgcgcacgttcgacatgtcctccaacacg
ttcctgagggagatctgcctcaagtgccccgagtacatggatggagaggagaagccggtt
cacctcatcaccactctggacaacaccgaggatgaccttctcactctggagtacatcaag
gccgacaagaacgctccagaattcaagaccttttacaagaacactgagcagcttataaag
gtcagaatgttctatagccagtgccaaatgttatcacagtgtgaattagcagcactgggg
ctggtcctcgtcactcgtcacttgaataagtctccgtctgtctctctctcaccctctcca
gcgcctaagaagtccaaatttgaggatgtggtgaatttgcacatcagagcggatctgtcc
tgtttgaaggtgttcatccggggacagaaggcacgcatctccgagatcagcatcgagggg
cttgtgtctgaagtgcagatgaagaagaaagcagtggagatctcggccaacctgaagaac
atcgtcatactggattgtgacaaagacgccctatataagaaggcggtgtccatcacgggg
aaggaggtgttcgatttccgcatggtcaaccacgtggacgccacggagggcgacgcctac
tcggacatgagtcaggtggacaccagcgtcaccctgaccgtgggctgcatccaggtggtc
ttcctcaacaagttcatctccaccatcctggccttcatcaataacttccagatggcgaag
gacgcggtggcggaggcgacggcgcaggccgcggagaaggctgccacgggtgtgctggag
ctggccgagcggagcacgcgcatctcgctggacatcgacgtcaaggcgcccgtcgtcttc
ctgccgcagtcgtccgtctcccgcaacgtcatcgccgccgacttcggcctggtcaccgtg
cagaaccacttctacgtggtgccgtccaaggcgcacgccaaaatcccccccgtcatcgac
gtgatgaaggtcgggctcagcgacctcaaaatgtaccggaccacgtttgagggggggcgg
ttccagaccgagatgcagctgctcaagccggtgaacctggacctgtcaatcaggcggaac
ctctctgcatcctggtaccacagcatccctgacatcgaaatcaccgcccgcctgaagcct
atgagcatggtgctcagtcaggaggacatgacggtggtgttgaagactctgagtgagaat
ctgagtgagacgtccgacgctgtccctcctcctcctcctcctgctacggataaatccgac
accttgtctgccaaggactctcagacgtcccaccctggagccaacaccgtggtgacggct
gcagttgtggagacgcagaagagctctaagctgaagaccacgctgaagctggacttccag
ttcgactccatgaccctggttctgtacagcccgaatgacaatgaggcgcagctgctggac
ttgcgggcggaggagctgaagctggctgagtttcggctgggcaccatctccacggccgtg
cagatgtactccgacagctccatgaaggcgtccgtcaagctggccaactgcatcctggac
gacaagcggcagagggtcaaaatgatcaccgccaggatgctggagatgaagccgggctcg
gaccgcagcgtgatggtggaggtgaactacaagcagggccgggagggcacggtgctggac
acgcaggtgcaggacatctacctgtgcgccagcatggagttcctgctcaccgtcgccgac
atcttcatcaaggccagtcagcagggcttctccgccccgcccaagaccaccaaacccacc
gcctcctcctccaaggagacagcgccagccccgcccgtcgtggctaagacggagatgaac
gtggtggtgaagaacccggagatcgtgtttgtggcggacctgacccgggccgacgccccg
gccctcgtcatgacgacgcagtgcgagctgctgatgcggagcgaccccgagggccagagc
atgacggcggccgtgcgggacctgaaggtggtggcgtgccccttcctgcgcgagggccgg
cggaacaacgtcaccaccgtgctgctgccctgccaggtgttcttccagagcacgcagtcc
cccaccagcccccaggccatggagctcagcatcagctccctcaccctcaaggtgtccccc
atcatcataaacacggtgatcaccatccagtcggcgctgtccccggccccggagacgccc
caggagctggccagccccgtcccgcccaacctgtgggacaggaagagctggcaggagctg
aagctgtggttcctggaggaggacagcgaggaggacgcccagagcctggtgccgctggtg
ccccagggcgagtctctgcgcatggccatcagctccatctgcctgaccctggaggccggc
gtgggccaccgcaccgtccccatgctcctcgccaagtcctccttccacggggacgtcaag
aactggagcacgctcatcaacctggagagcaagctcaacctggaggtgcattattataat
gagatgctgggggtctgggagccgctgctggagcctctggaggatgagaagaaagacggg
ttccggccgtggaccttggggctcaagatgaagaagaagcaggtgaaacacgaacgtgag
tcggacgaagtggaccacaccgtgcccgactacaagaccgtcatctgcatcagctccaag
gaccagctcaacatcaccctgtccaagtgcggactgggcatgctcagcaacctgggcacg
gcgtttgcggaggctgccagtcagacagcagatcacttccagaaggacgaggccccgctg
gtggtgatgaaccggctgggcctggcagtgtctgtgctgcacagcgagaccttcagcccc
atcggcactgcgtcctccaaccaccgggtggagctgccggacggcgagagcctcaacatg
gactacacctccaccaccaccactgaccagttctctgccatgaccagcctgagcagcaag
gactacttcatacagcctactcccgtggggcacacggcggccagcaccatcccgctgata
aaggtggggcggagcatgctcagcgtcgtgcacaaggactcgggcgtgacccgctacctg
gtgtgccagatctactctgcggagggcagcaagtacgtcaagatccgctccccgttccag
atgataaattacttctccatcccgttccgggtgtttgagggatccacgctgctgggcatg
gcgttgcccaaagaggagtactgcatccccctgggctcctacaggtcagtgctcagcctg
cagcctgtaacggagactgaggaagagtacgaggtgtcggagggcttcagctacgaaggc
ttgaccaatcacacgggccagtgcgtgcagcagacctgccgtcgctccggcaaccccgac
tgcgtcatgatgatcaacatggtcccgcagaaggacctgctcacctgccacggttcccac
ggcagcgaggacaccttcgacgagccctacatcctccagctgtggcccaccgtcctgctc
cggaaccttctgccctacccgctgaccttctccctggaggagaatggagaccacgccccc
agcacgctgcaggcgggccactctgcgcagctgcacctggccatcgtggaccggtcgcgg
ctgcgcctgcgtctgcgcgactacctgacccaggactggcagggcgagtaccggctgcag
accggccaggacgagatcgccttcaccgtcttccgctccgtcgcccccgacgacgggctg
ccgggcgccgagggggtggagctggacatcgccgtgcacgtgacctacgaccccggccag
acggtggtggcggtgcactccccctactggatggtgaacaagacggaccgtctgctgcag
tacaaggccgacgacatccacaggaagcacccgcgcgactacgacaagcccctcctcttc
tccttcaagccccgcaacttcctgcagaacaacaaggtgcgactcatggtgtcggacagc
gagctgtcggacgacttctccctggacaccgtgggcagctacggagacgtgaagtgcaaa
ggtcgcgtgaaagattacctggtgggggtaaagatcgacgccagcagcttcagtctgaca
cgaattgtgtcctttgtgccattctacctgttggtgaacaaaaccaagcacaccatcaaa
gtgagcgaggaagacgaggaaaactggaccgaagccccgccggaccaggtggcagtgccg
ttctggcccgagagggacagtaagaagctcaaggtgaaggtggagggctgccactccacc
ccccacaccgtcaacttccacaaacaggagaactgcctgctgcttcacctggacaacaca
ctgggcgggattattgtggacgtgaacctgacggaacattccaccgtgatccgcttctcc
gactaccacgacggcgccgcccccttcctcatcatcaaccacaccaaggcacagaccctg
gagttctaccagagcacgcagaaggagaaggacgagctggggcccgggcaggcggtgtac
tacacgtgggcggagcctgccggctcacgcacgctcaactggaagtgcgggaaccacacg
ggagagctgcgcaacgaggaggatttgcagctggatgtggacgggaaggggaacctgttc
ctggtctccttctacgagggcctccagcgggtggcgctgttcacggaggacagccgtgtc
tacaagctgctgtgggagagcgagaaggccgagccggccgaacaggaagtggtcctgtcc
ctgcaggaggtgggggtctctctggtcaacaacaacaccagccaggaagtctcctacatc
ggcatcactagctctgatgtggtgtgggagtcgaacgcgaagaagaagtctcgctggaag
cagatgagccataaggacgcagctcagctggagcgccacttcctggaatacatcgagaac
agcccagtggacaacctgatcctggacctggagaacaacatgcaggtctccctgaccccc
agcggtaaaggaatgaaagtcctgcagccgtacctgtcggacctcaggaggaacttcctg
ccgggggtgaaggtggagtacagcgtctccgcccgccagagggcctaccgggttcagatc
aaccgcatccagatccagaatcagctgcccggagccatcttcccctacgtattttacccc
atcaaaccccccaagtccgtcaccatggaatcagaacccaaacccctgactgacgtcagc
atcgtcaccagatctgctggccattcggacatttccaggatcaaatattttaaggttctg
attcaggagatggacctgaagctggatctgggctttctgtatgccatcatggacctgttc
accccggagaacgtcggcattatttcgtctgagcaggaggtggagctgtttgagaaggat
atcgagtatctgaaaactgaactgaatcatgcctctgccaccgacacatctcccatcagt
ctgtatgagtacttccacatctcccccatcaaactgcacctgagcttctccctgagttcg
gggggggacgatggcaataaggagaagagggagacggaggtcataccggtgcagtccctc
aacctgctgctgaagagcatcggcgctacgctaaccgacgtgcaggacgtcgtctttaag
ctcgcattctttgagctgcagttccagttccgcaccacacaacagctccagtgggaggtc
atcagacactactccaaacaggccattaagcagatgtacgttctggttctggggctggat
gttttggggaaccccttcggcctgatccgggggctctctgagggggtggaggccttcttc
tacgaaccttaccagggtgctatccgaggtccggaggagtttgcggagggcatggctctg
ggagtgaaggcgctggtgggcggtgctgtggggggcattgctggtgctgcctccaggatc
acgggcgccatggcgaagggagtggctgccatgacgatggatgaggaataccagcagaag
cggcgggaggccatgaacatacagccaagcggtctgagggagggtctgacccgcggcggc
aaggggctggtctccggttttgttagtggaatcacaggaatcgtcaccaagcccattaaa
ggagcgcagaaggagggtgcggccgggttctttaaggggatggggaaggggctggtgggg
gcagtgacacgccccacggggggcatcatcgacatggccagcagcaccttccaggggatc
aaaagggcgacggagacgtctcaggacgtggagagcctgcggccaccgcggttcttccac
gaggacggagtcatacgcccgtataaggagagggagggcgtcggcagccagatattacag
agaattgaaaatggaagatttgccaaatatcgatacttcgctcatgccaaggtgaacgaa
tccgatttcctgatgatcactaaaagctgcatattcttcgtgacgaaaggaacgttcggg
cagctgacctgcgagtggcagtactgctttgacgagttcaccaaagagccaatcattgtt
gaggggaggagactacggattgaagccaaggagagagtcaagtccgtgttccatgccaaa
gagtttgggaagatcattaacttcaaaactccagaaatagccacgtgggttctggccaag
ctagaagacgcaagggagagcctgccaaaatactga
DBGET
integrated database retrieval system
