Anguilla rostrata (American eel): 135265041
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Entry
135265041 CDS
T10705
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03082
ATP-dependent chromatin remodeling
arot03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
arot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135265041
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135265041
SWI/SNF complex
135265041
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135265041
PBAF complex
135265041
SWI/SNF complex
135265041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135265041
NCBI-ProteinID:
XP_064210304
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Position
10:complement(13201384..13209658)
Genome browser
AA seq
389 aa
AA seq
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MCITIRFVIAAKMALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLW
RRLASVEERKKIVASSHDHGYTTLATSVTLLKASEVEEIFEGNDEKYKAVSISTEPPAYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
TQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQRTYAFRSDFSENPLPTVEIAIRNTGDADQWCPLLETL
TDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtgcattacaattcgctttgttattgcagctaagatggcgttaagcaaaacatttgga
caaaaaccggtgaaatttcaactagaagaagatggagatttttacatgattggctcagag
gtaggcaactacctgcgcatgttccgcggctccttgtacaagaggtacccatcactctgg
aggcgattggcctctgtggaagagcggaagaaaattgtagcgtcatctcacgatcatggt
tacacaactttagccaccagtgtgacattgctgaaggcgtcagaagtggaggagatcttc
gaagggaacgatgagaagtacaaagccgtctccatcagtactgagcccccggcctacctc
agggagcagaaggcaaagagaaacagccaatgggtccccaccctgcccaacagctcccat
catctggatgctgtgccctgctccacgaccatcaaccgcaaccgtatgggccgcgacaag
aagaggaccttccccctctgctttgacgaccacgatcccgctgtgatccatgagaacgcc
acccagcccgaggtgctggtcccgatccggctggacatggagatagatggacaaaagctc
agggatgccttcacgtggaacatgaacgagaaactcatgacgcccgagatgtttgcggag
atcctgtgcgatgacctggacctgaaccctctgacctttgttcccgccattgcctccgcc
atccggcagcagattgagtcctacccaacagacagcattcttgaggagcagacagaccag
agggtcattatcaagctgaacatccacgtggggaacatctccctggtggaccagtttgag
tgggacatgtcggagaaggagaactccccggagaagtttgccctgaagctgtgctccgag
ctgggcctggggggcgagtttgtcaccaccatcgcctacagcatccgcgggcagctcagc
tggcaccagaggacgtacgccttcaggtctgatttcagtgagaacccactgcccactgtg
gagatcgccatccggaatactggcgacgctgaccagtggtgtcccctactggagacactg
acagacgcagagatggagaagaagattcgggaccaggacaggaacaccaggcgcatgaga
cgacttgcaaacacagccccagcctggtaa
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