Apteryx rowi (Okarito brown kiwi): 112960678
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Entry
112960678 CDS
T07573
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112960678 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arow03041
]
112960678 (PRPF8)
Spliceosome [BR:
arow03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112960678 (PRPF8)
Complex C
U5 SnRNP specific factors
112960678 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
112960678
NCBI-ProteinID:
XP_025910975
Ensembl:
ENSARWG00000014513
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgttcccgtaccgcggcggctgcgccccagtgcccagcccgctggcgccg
ctgcctgactacatgtctgaggagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgcggagaagaggaagttcggcttcgtggacgcgcagaaggaggac
atgccccccgagcacgtccgcaagatcatccgcgaccacggcgacatgaccaacaggaag
ttccgccacgacaagcgcgtctacctgggtgctctgaagtacatgcctcatgcggttcta
aagctcttggagaacatgcccatgccttgggaacaaatcagagatgttccagttctgtac
catatcacaggcgccatctcttttgtgaacgagattccttgggtcatagagccagtgtac
attgcacagtgggggtcaatgtggattatgatgaggcgagagaagagggataggcgtcac
ttcaagaggatgagattccctccatttgatgatgaagaaccccctctggattatgctgat
aacatcctggatgtagagcccctggaagcaatccagcttgagctggatccagaggaagat
gctcctgtgttagactggttctacgaccaccagccgctgaaggacaacaggaagtacgta
aatggttctacataccagcgttggcagtttactctccctatgatgtccacgttgtaccgg
ctggctaatcagctgctcactgaccttgtggatgacaactatttctatttgtttgacctg
aaagcattcttcacctccaaggcactgaacatggctattcctggaggtcccaagttcgag
cctcttgtcagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaattatcatcaggcagccgatcaggacggagtacaaaattgctttcccatacctgtac
aataacctgccacaccatgtccacctgacctggtaccatactccaaatgtcgttttcatt
aaaacagaagatcctgatctcccagctttttacttcgatccgctgatcaatcccatttca
cacaggcattctgtcaagagtcaggaaccgttgcctgatgatgatgaagagtttgagtta
ccagagtttgtggaacctttcctgaaggatactccgctctacacagacaatacagccaat
ggcattgccctgctatgggccccacggcccttcaacttgaggtctggcaggactcggaga
gctcttgacatcccgctggtcaagaactggtatcgtgagcattgcccagcaggccagcca
gtgaaagtgcgagtctcctatcagaagttactgaaatactatgttctgaatgcactcaag
cacaggccccccaaggcccagaagaagaggtacctgttccgctctttcaaggctacgaaa
tttttccagtcaacaaagctagactgggtggaagtaggcctgcaagtgtgtcgccagggc
tacaatatgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattac
aacttcaacctgaagccagtgaagaccctcaccaccaaggaaagaaaaaaatcccgattt
ggtaatgctttccatctgtgccgagaggttctgcggctaactaagttggtagtggacagc
catgtccaatacaggcttggaaacgtggatgcatttcagttggcagatggcttgcagtac
atctttgcccatgtaggtcagctgacgggaatgtacagatacaagtacaaactgatgagg
cagattcgtatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcacaccgcttctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcaaagggtgtagcaaagaccgtcacaaagcagcgtgtggagtctcac
tttgacctggagctgagggcagccgttatgcatgacattctggatatgatgccagaaggg
atcaaacagaacaaagccagaaccatcctgcagcatttgagtgaggcttggcggtgctgg
aaggccaatatcccctggaaagtgcctgggctgccaactcctattgagaacatgatcttg
aggtacgtgaaggcaaaagctgactggtggacaaatacagctcactacaacagggaacgg
atccgtcggggtgccacagtggacaagactgtctgcaagaagaatctgggccggctsacc
agactctatttgaaagctgagcaggaacggcaacataattacttgaaggacgggccttac
atcactgcagaagaggctgttgctgtgtacacaaccacagtgcactggctggaaagcagg
agattctcacccattcccttccccccactttcctacaagcatgacaccaaattgctcata
ttagccctggaaaggctgaaggaagcttacagtgtgaaatctcgcctgaatcagtcacag
agagaggagttgggcttgattgaacaggcttacgataatcctcatgaagctctgtctaga
atcaaacgacaccttctaactcagagagccttcaaggaggtgggtattgagttcatggat
ctctacagccacttagttcctgtttatgatgttgagcccttggagaaaatcacagatgct
tatctggatcagtacttgtggtatgaggctgataagcgaagactcttccctccttggatc
aaacctgctgacactgagcctcctccactgttagtgtacaagtggtgccaaggcattaat
aatctgcaagatgtttgggaaacgagtgaaggtgaatgcaatgtgatgctggaatctcga
tttgagaagatgtatgagaagattgatctgacactgctcaacaggctcttgcgtctcatt
gttgatcataacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacaccaactcctatgggattattcgtgggctgcagtttgcttctttcatc
gtccagtattatgggctggtgatggacctgttggtgctgggtctgcaccgtgccagtgaa
atggcagggcctccccagatgccaaatgacttcctgagcttccaggatattgctactgag
gtggcccatcccattcgcctcttctgcagatatatcgaccgtattcacatcttcttcagg
tttacagcagatgaggcaagagacttgattcagcgctacctgacagagcatccagatccc
aacaatgagaacattgtaggctacaataacaagaaatgctggccccgggatgctcggatg
cgcctcatgaaacatgatgtgaaccttggtcgtgctgtgttctgggatatcaagaaccgc
ttgcctcgatcagtcaccacagtgcagtgggagaacagcttcgtatctgtttacagcaaa
gataaccccaatttgctgtttaacatgtgtgggtttgaatgccgcatcttgcccaaatgc
cgcaccagctatgaggagttcactcacaaggatggggtctggaacctgcagaatgaggtc
accaaggagcgcacagctcagtgcttcctgcgtgtggatgatgagtctatgcagagattt
cacaacagagtgaggcagatcctcatggcgtctggctccacaaccttcactaagattgtc
aataaatggaatacagccctgattggcttgatgacatatttccgggaagctgttgtaaat
actcaggagttgcttgatttactggtgaagtgtgagaataaaatccagactcgaattaaa
attggtctgaattccaaaatgcccagccgtttcccacctgtggtgttttacacccctaaa
gagctaggcgggctgggcatgctgtccatgggccacgttctcatcccacagtctgacctg
aggtggtccaagcagacagacgttggcatcactcacttccgctcaggaatgagtcatgag
gaggaccagctgatcccaaatttgtatcgttacattcagccatgggagagtgaattcatt
gactctcagagagtgtgggcagaatatgccctcaagcgacaagaggctatagcccagaac
aggcgtctgacgctggaggacctggaggactcgtgggacaggggrattcctcgtattaac
acccttttccagaaagaccggcacaccctagcttatgataaaggatggagagtcaggact
gacttcaaacagtaccaggtcctgaaacagaacccgttctggtggacgcaccagcgccat
gatgggaagctctggaacctgaacaactaccgcacagatatgatccaggcacttggtgga
gtggaggggatcctggagcacacgctcttcaagggcacttacttccccacgtgggagggt
ctcttctgggaaaaggccagtggctttgaggaatccatgaagtggaagaagctgacgaat
gcccaaagatcgggtttgaaccaaattccaaacagaagattcacactgtggtggtctcct
accattaacagagccaatgtgtacgttgggtttcaggtgcaactggatttgacaggcatc
ttcatgcatggcaagatccccacgctgaagatttccctcattcagattttccgagctcac
ttgtggcaaaagatccatgagagcattgtgatggacttgtgtcaggtgtttgaccaagag
ctagatgctctggagattgagacagtgcagaaggagaccatccatcccaggaagtcatac
aagatgaattcctcatgtgcagatatccttctctttgcttcctataaatggaatgtgtct
cgtccgtcactgcttgcagattccaaagatgtgatggacagcaccaccactcagaagtac
tggatagatatacagctgcgctggggagattacgattctcatgacatcgagcgctatgca
agagccaagttcctggactacactacagacaacatgagtatctatccgtctcccactggt
gtgctcattgccattgatctggcctataacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaagccatggccaaaattatgaaagcgaaccctgcactg
tatgtgttgagagaacgaatccgcaagggcttgcagctgtactcatctgagcccacagaa
ccctacctttcctcccagaactatggggagctcttctccaaccagatcatctggtttgtg
gatgacaccaatgtgtacagagtgaccattcacaagacttttgaagggaatttgaccaca
aaacccatcaatggggccattttcatcttcaatcccaggactggacagctcttcctgaag
atcatccatacatctgtgtgggcaggacaaaagcgtctagggcagctggccaagtggaag
actgctgaagaagtggctgctttgattcgttcacttcctgtggaggagcagcctaagcag
atcatagtgactcggaagggcatgttggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcagagttgcagctgcccttccaggcctgtctgaaagtggaa
aagtttggtgatctcatcctgaaggctactgaaccacagatggttctcttcaatctctat
gatgactggctgaaaaccatctcttcctatacggcattctcacgtctgattctgattctc
cgggcactacatgtgaataatgatcgagccaaagttattttgaaaccagacaagacgacc
ataacagagcctcaccatatctggccaacgctgacagatgaggaatggatcaaggtggag
gtgcagctgaaggatctgatccttgctgactatggcaagaagaacaatgtgaatgttgca
tccctgacgcagtcagagatccgagatattatcctgggcatggagatctctgccccatcc
cagcagagacagcagattgcagagattgagaagcaaaccaaggagcagtcacaactgaca
gccacacagacccgtactgttaacaaacacggggacgaaataatcacctctacaaccagc
aactatgaaacccagactttctcctccaagactgagtggcgagtcagagcaatttctgct
gccaacctccacttgagaacaaaccacatctatgtttcatcagacgatataaaggaaacg
ggctatacttacattcttcccaagaacgttttgaagaaattcatctgcatctcagatctg
cgggcccagattgcaggttacctatatggagtgagccctcctgataatccccaagtgaag
gagatccggtgcattgtgatggtacctcagtggggaacacaccagaccgtgcatctccca
ggacagctgccgcagcatgagtatctcaaggaaatggaacctctgggatggattcacacc
caaccaaatgagtcccctcagctctcgccacaggatgtcaccacccatgccaaggtcatg
gctgacaacccgtcctgggatggggagaagactatcatcatcacctgcagttttacacca
ggctcctgcacgctgacagcctacaaactgactccgagcggctacgagtggggcaggcag
aacacggacaaagggaacaaccccaagggctacctgccctcccattatgagagggtgcag
atgctcctgtcagatcgcttcctcggcttctttatggttccagcgcaagggtcctggaac
tacaacttcatgggtgtgcgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttctaccacgaggtccatcgcccctcgcacttcctcaacttcgccctgctg
caggagggggaggtctactccgccgacagggaggacctctacgcctag
DBGET
integrated database retrieval system
