Apteryx rowi (Okarito brown kiwi): 112960807 Help Entry 112960807         CDS       T07573                                  Symbol DDB1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism arow  Apteryx rowi (Okarito brown kiwi) Pathway arow03420   Nucleotide excision repair arow04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:arow00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     112960807 (DDB1)   09124 Replication and repair    03420 Nucleotide excision repair     112960807 (DDB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:arow04121]     112960807 (DDB1)    03400 DNA repair and recombination proteins [BR:arow03400]     112960807 (DDB1) Ubiquitin system [BR:arow04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      112960807 (DDB1) DNA repair and recombination proteins [BR:arow03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       112960807 (DDB1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       112960807 (DDB1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  112960807 NCBI-ProteinID:  XP_025911174 Ensembl:  ENSARWG00000015009 LinkDB All DBs Position Unknown AA seq 1157 aa AA seqDB search MRLLGGLWGAAGQVVATSVSHHQTARRFGGVAACPGGGHFTSAEDLNLLIAKNTRLEIYV VTAEGLRPVKEVGMYGKTAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITR AHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQ VIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVP EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFML LLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQ GSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASID LPGIKGLWPLRSDSHRETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNV AHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRP QELRQISCTEMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLG GEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRS LSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGT IDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSS SVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGK DPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLAS INSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE EIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEF VNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK SVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKRE ATVDDLIKIVEELTRIH NT seq 3474 nt NT seq  +upstreamnt  +downstreamnt atgaggttgctgggggggctttggggtgctgccgggcaggtggtggcgacgtctgtgtca catcaccagaccgcaaggcgctttgggggtgttgcagcgtgtcctggcggggggcacttc acctccgcggaggatctgaatctgctgattgccaagaacacccggcttgagatctatgtg gtcacagcagaggggctgcggcctgtcaaggaggtgggcatgtatggcaagaccgctgtt atggagctcttccgcccaaagggtgagagcaaggatttgttgttcatcctgacagccaag tacaatgcgtgtatccttgagtacaagcagaatggggacagcattgatattatcacccgt gcccacggcaacgtgcaggatcgtatcggtcgtccctcggagacaggtataatcggcatc attgacccagagtgccggatgattggcctgcgactctatgacggcctcttcaaggtcatc cctctggaccgggagaacaaggagttaaaggcttttaacatccgcctggaagagctccaa gtcatcgatgtgaaatttctctatggttgtcaggctccgaccatctgcttcgtctaccag gaccctcagggtcgccacgtcaagacatatgaggtctccctgcgagaaaaggagtttaac aaaggtccttggaagcaggagaatgtagaggctgaagcctccatggtcattgcagtgcca gagccttttggaggagcaatcatcattgggcaggagtccatcacctatcacaacggagac aaatatctagctatagctccacccatcatcaagcaaagtacaattgtgtgccacaatcgt gtggatcccaatgggtcccgatacttgctgggggacatggagggacgtctcttcatgctg ctcctggagaaggaggaacagatggatggcactgtcactttgaaggacctgcgtgtggaa ctgcttggagagacatctattgcagagtgtttgacctacctggacaacggtgttgtgttt gttggctctcggcttggggattcccagcttgtgaagctcaatgtggacagcaatgaacag ggctcctacgtagtggctatggagaccttcaccaaccttggtcccatcgtcgacatgtgt gtggtagacctggaaagacaaggccaagggcagctggtcacctgctcgggtgcatttaaa gagggttcgctgcggatcatccggaatggcattgggattcatgagcatgccagcattgac ttgccaggaattaaaggcctgtggcccctgaggtcagactctcatcgtgagacagacaat acattggtgctgtcctttgttggccagaccagggttcttatgttaaacggagaggaagtg gaagagacagagctgacagggtttgtggatgatcagcagactttcttttgtggcaatgtg gcccatcagcaattgattcagatcacctctgcctctgtgagactggtcagtcaggagccc aaagctctggtgagtgagtggaaagagcccaatgggaagaacatcagtgtggcttcctgc aacagtaaccaggtggtggtggctgtgggacgagccctgtattacctggagatcagaccc caggagctcaggcagatcagctgcacagaaatggagcatgaagttgcctgcctggacatc acccctttgggggacagtaacggcatgtccccgctgtgtgctatcgggctctggactgat atctctgcccgcatcctaaagctgccttcatttgagctgctgcacaaagagatgctggga ggagaaatcatccctcgttccatcctgatgacaacctttgagagcagccattatcttctg tgtgccctgggggatggggctctcttctactttgggctcagccttgagacaggtttgctg agtgaccggaagaaggtgacccttgggacgcagcccactgtcctgaggacttttcgttct ttgtccacgaccaatgtgtttgcctgctctgaccgccccaccgtgatctacagcagtaac cacaagctggtcttctccaatgtcaaccttaaggaggtgaactacatgtgtcccctcaac tcggatgggtatcctgacagcctggcattggccaataacagcaccctgacaatcggcact attgatgagatccagaagctgcacatccgcacagttcccctctatgaatcacccaggaag atctgctaccaagaggtgtcacagtgttttggtgtgctctcgagtcgtatcgaggtgcag gatgccagtgggggtaccactgcactcagacccagcgccagcacgcaggccctatccagc agcgtgagcaccagcaagctgttctccagcagcacggcaccacacgagacatcctttgga gaggaggtggaggtgcacaacctgctcattatagatcagcatacttttgaagtgcttcat gctcaccagtttctgcaaaatgaatacgcccttagcctggtctcctgcaagcttggcaaa gatccaaacacctacttcattgtgggcactgccatggtgtatcctgaggaggcagagccc aaacagggccgcattgttgtcttccactattctgacgggaagctgcagagcctggcagag aaggaggtgaaaggggctgtgtattccatggtggagttcaatgggaagctgttagccagc atcaacagcacggtgcgcctgtatgagtggacagctgagaaagagctgcgcacagagtgc aaccattacaataacatcatggcgctttacttgaagaccaagggagacttcatccttgta ggagatctgatgcggtctgtcctgctccttgcgtacaagcccatggaaggaaactttgag gagattgctcgggacttcaatccaaactggatgagtgctgtagagatcttggacgatgac aacttcttgggagcagagaacgcctttaacctgtttgtatgccagaaggacagtgctgcc acaaccgatgaagagcgccagcacttgcaagaggtggggctgtcccatctgggagaattt gtcaacgttttctgccatgggtctctggtcatgcagaacctgggtgagacgtctacaccg acgcagggctcagttctcttcggcacagtcaacggcatgattggactggtgacctcgctg tcggagagctggtacaacctcctgctggacatgcagaacaggctcaataaagtcatcaag agcgtgggcaagatcgagcactctttctggagatcatttcacactgaacgcaagacggaa ccagctacggggttcattgatggtgacttgattgaaagtttcttggacatcagcaggccc aagatgcaggaggtggtggcaaacctgcagattgatgacggcagcggcatgaagagggag gccaccgtagatgacctgataaagattgtggaggagctgacccggatccattag

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