Apteryx rowi (Okarito brown kiwi): 112960903 Help Entry 112960903         CDS       T07573                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism arow  Apteryx rowi (Okarito brown kiwi) Pathway arow04510   Focal adhesion arow04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:arow00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     112960903 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     112960903 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:arow00536]     112960903 (COL2A1) Glycosaminoglycan binding proteins [BR:arow00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112960903 (COL2A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Frataxin_Cyay Motif Other DBs NCBI-GeneID:  112960903 NCBI-ProteinID:  XP_025911362 LinkDB All DBs Position Unknown AA seq 1331 aa AA seqDB search EAGSCVQDGQRYSDKDVWKPEPCRICVCDTGTILCDEIICEEMRDCPSPEIPFGECCPIC PTDQPAASGQPGPKGQKGEPGDIKDVIGPRGPPGPQGPAGEQGQRGDRGEKGEKGSPGPR GRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPR GPPGPTGAPGPQGFQGNPGEPGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKSGERGVP GPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKPRGPPGPQGATGPLGPKGQTG EPGIAGFKGEQGPKGETGPAGPQGAPGPSGEEGKRGARGEPGAAGPVGPPGERGAPGNRG FPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVG PTGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDG ETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGTPGLVG PRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERG AAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAG ARGAPGERGETGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQG PTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAG PPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPG LPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPSGEPGREGTPGSDGPPGRDGAAGVKG DRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGESGAQGPMGPSGPAGARGMPGPQGPRG DKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDG SNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQVEKGPDPI RYMRADEAAGGLRQHDVEVDATLKSLNNQIESIRSPEGSKKNPARTCRDLKLCHPEWKSG DYWIDPNQGCTLDAIKVFCNMETGETCVYPTPSSIPKKNWWTSKTKEKKHIWFAETINGG FHFSYGDENLAPNTANIQMTFLRLLSTEGSQNVTYHCKNSIAYMDEESGNLKKAILIQGS NDVEIRAEGNSRFTYSALEDGCTKHTGKWGKTVIEYRSQKTSRLPIVDIAPMDIGGAEQE FGVDIGPVCFL NT seq 3998 nt NT seq  +upstreamnt  +downstreamnt aggaggcaggcagctgcgtgcaggacgggcagagatatagcgataaggatgtgtggaaac cggagccctgccgtatctgcgtgtgcgacacggggaccatcctctgtgacgagattatct gtgaagagatgcgagactgtcccagcccagaaatccccttcggagagtgctgccccatat gccccactgaccagcctgccgccagcgggcaacctggccccaagggacagaaaggcgaac ccggcgatattaaagatgtcataggaccccgagggcctccgggaccgcagggtcccgcag gcgagcagggacaacgaggcgaccgcggcgagaaaggagagaagggctctcccggacccc ggggcagggatggcgaacccggcacccccggtaatcccggtccccccggccctcccggcc ctcccggtccccccggccttggcggaaacttcgccgcgcagatggcgggcggcttcgacg agaaggccggaggcgcgcagatgggcgtcatgcaaggccccatgggacccatgggacccc gcggccctcccggccccaccggcgctcccggtccgcaaggatttcaaggcaaccccggag agcccggcgagcccggcgctgccggtccgatgggtccccggggacctccgggacctcctg ggaaacccggcgacgacggtgagacaggcaagcctggaaaatctggcgaacgcggcgttc ccggcccccagggcgctcgcggctttcctgggacgccaggtctccccggagtgaaaggcc accggggctaccccggcttggacggcgcgaaaggagaggcaggagctcccggagccaagc cccgcggcccccccggcccccagggcgccaccggcccgctgggacccaaaggccagacgg gagaacccggcatcgcaggcttcaaaggcgagcagggtcccaagggcgagacgggccccg caggaccccagggtgctcccggaccgtctggcgaggaaggcaagagaggagcgcgtggag agcccggcgccgccggccccgtcggaccccccggcgagcggggtgctcccggcaatcgcg gcttccccggacaggacgggctggccggacccaagggtgctccgggtgagcgtggtcccg ctggccttgccggtcccaaaggagccaccggtgatcccggccgccccggagagcccggcc tgcctggcgccaggggtctcaccggccgccctggagacgctggtcctcaaggcaaagttg gcccaactggtgctcccggcgaggacgggcgccccggcccacccggcccgcagggtgctc gcggacaacccggcgtcatggggttccccggtcccaaaggtgctaacggcgagcccggaa aagccggggagaagggacttcccggcgccccggggttgcgaggtcttcctggcaaagacg gcgagacgggagctgccggcccgccgggacccgcgggtcccgccggcgagagaggagagc aaggagcccccggaccctccggcttccaggggcttcccggcccgccaggccccccgggag agggcggcaaacccggagaccagggcgttcccggagaagccggcacccccggtctcgtcg gtcccagaggcgaacgcggcttccccggagaacgcggctcccccggcgctcaagggctgc aaggtccccgcgggctccccggcacgccgggcaccgacggacccaagggtgccaccggcc ccgccggccccaacggcgcccagggcccccccgggctgcagggaatgccgggcgagcgag gagcagccggaatcgccggccccaagggagaccggggagacgtcggcgagaaagggcccg agggagctcccggcaaggacggcgcgcggggtctgaccggtcccatcggcccccccggcc ctgccggtcccaacggcgagaagggtgaatccggccctcccggcccatccggcgctgccg gtgcccgcggtgcccccggcgagcgcggagagaccggagcccccggtcctgccggatttg ccggcccccccggggccgacggacaacccggcgctaaaggcgagcagggagaacctgggc agaaaggtgacgccggcgctcccggtccccaaggtccttccggagcgcccggcccgcagg gtcccaccggtgtgaccggtcccaaaggagcccgcggtgcccagggcccccccggagcca ccggattccccggcgccgccggacgtgtcggaccgcccggccccaatggtaacccaggcc cccccggcccgcccggatccgccggcaaagatggtcccaaaggtgctcgtggtgatgccg gacccccaggccgtgccggcgatcccggtctccaaggtcctgctggtccccccggcgaga agggcgaacccggagaggacggccccgcgggtcccgacggcccccccgggccccagggct tggcgggacaacgcggcatcgtcggtctgcccggccagcgcggcgagagaggcttcccgg ggctgccggggccgtcgggcgaacctggaaaacaaggagctcctggctccgcgggcgacc gcggcccccccggccccgtgggtccccccgggctgacgggtccctccggcgaacctgggc gagagggcacccccggctccgacggccccccgggcagagacggcgccgccggcgtgaagg gcgaccgtggcgagacgggtcccgtgggcgctcccggcgctcccggagcccccggcgctc ccggccccgtcggtcccaccggcaaacaaggcgacagaggcgaatcgggtgcccaaggac ccatgggtccctccggtcccgctggcgctcggggcatgccgggtccccaaggtcctcgcg gagacaagggtgagaccggcgaggctggagagagagggctgaagggtcaccgaggcttca ccgggctgcaaggtcttcccggacctcctggtccttctggagaccaaggtgctgctggtc ccgctggtccctccggccccaggggtcccccaggccccgtcggcccctctggcaaagacg gctccaacggcatgcccggccccatcggtcctcccggcccccgcggacggagtggggaac caggtcctgcgggtccccctggaaatcctggtcctcctggtcctcctggccccccgggca ccggcatcgacatgtccgctttcgctggcctcggccaggtggagaagggccccgatccca tccgctacatgcgggcggacgaggcggccggtggcctgcggcagcacgacgtcgaggtgg acgccacgctgaaatccctcaacaaccagatcgagagcatccgcagccccgagggctcca agaagaacccggccaggacctgccgcgacctcaaactctgccatcccgagtggaagagcg gagactactggatcgacccgaaccagggctgcaccttggacgccatcaaggttttctgca acatggagacaggcgagacctgcgtctacccgaccccgagcagcatccccaagaagaact ggtggaccagcaagaccaaagagaagaagcacatctggtttgcagagaccatcaacggtg gtttccactttagctacggcgatgaaaacctggctcccaacactgccaacatccagatga ccttcctccgcctcctgtccaccgaaggctcccagaacgtcacctaccactgcaagaaca gcatcgcctacatggacgaggagtcgggcaacctgaagaaagccatcctcatccagggct ccaacgacgtggagatcagagccgagggcaacagcaggttcacatacagcgccctggagg acggctgcacgaaacacactggcaaatggggcaagacagtcatcgaataccgatcgcaga agacctcacgcctgcccattgtagatattgcacctatggacattggtggagccgagcagg agtttggcgtggatattggcccagtctgcttcttgtaa

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