Apteryx rowi (Okarito brown kiwi): 112960985
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Entry
112960985 CDS
T07573
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04120
Ubiquitin mediated proteolysis
arow04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112960985 (SYVN1)
04120 Ubiquitin mediated proteolysis
112960985 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112960985 (SYVN1)
Enzymes [BR:
arow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112960985 (SYVN1)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112960985 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
U-box_ZFPL1
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112960985
NCBI-ProteinID:
XP_025911511
Ensembl:
ENSARWG00000003674
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MFRTAVMMASSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPVQSQPPPEAPEQAQQPPQPPQ
VPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSAENAGAASSTASASAARPGD
AAATGSEATPAGAVPGLPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDR
QNLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGSPXPAPPQPPSAAAAASSSRETPAE
ESVPLRSPDGALAPAAEPDSTASLDPAGPAGAEGFAPLAGPEEEGEESSLLGEPDAAELR
RRRLQKLESPPSSSH
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacagcggtcatgatggcctcgagcctggcgctgacgacggccgtcgtggct
cacgcctactacctgaagcaccagttctaccccaccgtggtttatctcaccaaatccagc
cccagcatggccgttctctacatccaggctttcgtgctggttttcctgctgggcaaattt
atgggcaaggtgtttttcgggcagctgcgggcagcggaaatggagcacctgctcgagcgg
tcgtggtacgccgtcacggagacctgcctggccttcaccgtcttcagggacgacttcagc
ccccgcttcgtggccctcttcacccttctcctcttcctcaagtgcttccactggctggcc
gaggaccgggtggatttcatggagaggagcccgaacatctcctggctcttccatttccgc
atcgtctcgctcatgttcctgctggggattctggatttcctcttcgtcagtcacgcgtac
cacagcatcctcacgcgcggagcctcggtccagctggtgttcggctttgagtacgccatc
ctcatgaccatggtgctgactatcttcatcaaatacgtgctgcactccatcgacctgcag
aacgagaacccctgggacagcaaagccgtctacatgctctacacggagctcttcacgggc
ttcatcaaagtcctgctctacatggccttcatgaccatcatgatcaaagtccacaccttc
ccgctcttcgccatccgccccatgtacctggcgatgaggcagtttaagaaagcggtgacg
gacgcgatcatgtcccgccgggccatccgcaacatgaacacgctctaccccgacgccacc
ccggaggagctgcaggccatggacaacgtgtgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgtctgccctgcaaccacatcttccacaccagctgcctgcggtcgtggttc
cagcgccagcagacgtgtcccacctgccgcatggacgtgctgcgcgcttccctgcccgtg
cagtcgcagccgccgcccgaggcgccggagcaagcccagcagccgccgcagccgccgcag
gttccccagccgcccaactttccccaaggaatcctgccgccttttcctccggggatgttc
cccttctggccgccggtgggtcccttccctccggtccccggcgtgcagccgcccaacagc
gccgaaaacgccggagccgcctcgagcacggcttcggccagcgctgcgaggcccggagat
gctgctgcaacgggatcagaagccactccggcgggagcagtgcctgggcttcccttcccg
ccgccctggatgggaatgccatggccaccgctgttcggtttccctcccatgccggtgccg
cccgccggcttcgcggggctgacggaggaagagctgcgggccatggagggccacgaccgg
cagaacctggaagccaggctgcagtgtctgcagaacatccacacgctcctggacgccgcc
atgctgcagatcaaccagtacctgacggtcctggcgaccatcgggtctcctygccccgct
ccgccccagcccccttccgccgccgctgccgcttcctcgagccgggagacccctgctgaa
gagtccgtcccgctccgctcgccggacggcgccttggcacccgccgccgagcccgactcg
acggcttccctcgatccggccgggccrgcgggcgccgagggcttcgcgcctctcgccggg
ccggaagaggaaggcgaggaatcgtctctgctgggggaacccgacgccgcggagctccgg
agacgccggctccagaaactggaatcgcccccttcctcttctcactga
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