KEGG   Apteryx rowi (Okarito brown kiwi): 112961021
Entry
112961021         CDS       T07573                                 
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow04510  Focal adhesion
arow04517  IgSF CAM signaling
arow04518  Integrin signaling
arow04519  Cadherin signaling
arow04520  Adherens junction
arow04810  Regulation of actin cytoskeleton
arow04820  Cytoskeleton in muscle cells
arow05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:arow00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    112961021 (VCL)
   04518 Integrin signaling
    112961021 (VCL)
   04519 Cadherin signaling
    112961021 (VCL)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112961021 (VCL)
   04520 Adherens junction
    112961021 (VCL)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112961021 (VCL)
   04810 Regulation of actin cytoskeleton
    112961021 (VCL)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    112961021 (VCL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:arow04812]
    112961021 (VCL)
   04147 Exosome [BR:arow04147]
    112961021 (VCL)
Cytoskeleton proteins [BR:arow04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     112961021 (VCL)
Exosome [BR:arow04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112961021 (VCL)
SSDB
Motif
Pfam: Vinculin Talin_IBS2B VMAP-M0 Spectrin_SYNE1_2
Other DBs
NCBI-GeneID: 112961021
NCBI-ProteinID: XP_025911600
Ensembl: ENSARWG00000003884
LinkDB
Position
Unknown
AA seq 1078 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIFFLTYGTMFTAMKIFVTTKNSKSHGIEEALK
NRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPN
APPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPM
AMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHI
RGIMAEARKVAELCEEPKERDDILHSLGEISALTAKLSDLRRHGKGDSPEARALAKQIAT
SLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRR
LANVMMGPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQ
EAMTQEVSDVFSDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAA
AVGTANKTTVEGIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEK
MTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAK
REVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKCFLDSGYRILGAV
AKVREAFQPQEPDFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQ
KAGEAINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALI
QCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGR
TNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtagcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggcaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccacccgcatttatcaaa
gtggagaatgcctgcaccaaacttgttcgggcagcccagatgctgcaagcagatccttat
tccgtcccagctcgtgactatctcattgatggatcgagaggcatcctttctgggacgtca
gacttgcttctgacattcgatgaagccgaggtccgtaaaatcatccgtgtctgcaaagga
attttggaatatctgactgtggcggaagtagtagagactatggaggatttggtgacatac
acaaagaatctagggccaggaatgacgaagatggccaaaatgattgatgagagacagcag
gaattaacgcaccaggaacatagagttatgctggtaaactcaatgaatactgtgaaagag
ctattgccagtacttatttcaggtattttttttctaacctatggtaccatgttcacagct
atgaaaatttttgtaaccacaaaaaactctaaaagccatggaatagaagaggccttgaaa
aatcgcaatttcacagtagagaaaatgagtgctgagataaatgaaataatccgtgtatta
caactcacttcctgggatgaagatgcctgggccagcaaggacactgaagccatgaaaaga
gctttggccttaatagattcgaagatgaaccaggcaaaagggtggctgagagatccaaat
gcacctccaggggatgctggtgagcaagcaataaggcagatccttgatgaagctggaaaa
gcgggagaactgtgtgccggcaaagaacgcagagagattctgggaacatgcaaaacactg
ggccagatgacggatcaactggctgatctccgagccagaggacagggtgctacaccaatg
gctatgcagaaagcacagcaggtgtcacaaggtctggacttgctcactgcgaaagtggag
aatgcagcccgcaagttggaagccatgacaaactctaagcaggcaattgctaagaagatt
gatgctgctcagaattggctagcagatcctaatgggggcagcgaaggagaagaacatatt
cggggaattatggctgaggcaaggaaagttgcagaattatgtgaagagcctaaggaaaga
gatgacatccttcactccttgggagaaatctctgctttgacagctaagctgtcagatcta
cgaagacacggaaaaggtgactctccagaggcccgtgcattggctaagcaaatagctaca
tcacttcagaatttacaatccaaaacaaacagggctgtagcaaatactaggccggttaag
gcagctgtccatttggaaggcaagattgagcaagctcaaaggtggatagacaatcctact
gttgacgatcggggagtaggccaggcagcaattcggggactggttgcagaaggtcgtcgt
ttagccaatgtcatgatgggaccttatcgtcaagacctgcttgccaaatgtgaccgtgta
gaccagctggctgctcagctagccgacctcgcagcgagaggggagggagagtctcctcag
gctagggcaatcgctgctcagcttcaggactcactcaargatcttaaaacacggatgcaa
gaagcaatgacccaggaggtttctgatgtttttagtgacactacaactcccattaaattg
ttagcagtagcagccactgctccttctgatgctcccaatagggatgaggtgtttgatgaa
agagcagcgaactttgaaaaccatgctgccagactgggagctacagcagaaaaagcagct
gcagttggaacagctaataaaactactgtggaaggcattcaggcaactgtgaaatcagca
agagaacttaccccacaggtagtatcagctgcccgtattctcctgagaaatcctggaaat
caagctgcttatgagcattttgagaccatgaaaaaccaatggattgataacgtagaaaaa
atgacagggttggtggatgaagccattgatactaagtctctgttggatgcatcagaagag
gctattaagaaagatcttgataaatgtaaagttgcaatggccaatattcaacctcagatg
ctggtagctggtgccaccagcattgctagacgagcaaaccgcatcctactggttgcaaaa
cgggaggttgaaaattcagaggaccctaaattccgggaggctgttaaagcagcctctgat
gagctaagcaaaactatatcgccaatggtaatggatgcgaaagctgtggcaggaaacatt
tctgatccgggtttacagaagtgtttcttggattctggatacagaatcctgggagctgta
gccaaagtcagagaagccttccagcctcaggaaccagattttccacctcctcctccagac
cttgagcagcttcatctgactgatgagcttgcccctccaaaaccaccactaccagaaggt
gaggttcccccacccagaccgccaccacctgaagaaaaggatgaagagttcccagagcag
aaagcaggagaagctattaatcagcccatgatgatggctgctaggcagttgcatgatgaa
gctcggaaatggtctagcaagggtaacgatatcattgctgctgcgaagcggatggcgctg
ctaatggcagagatgtctcgcctggtgagaggaggtagtgggaacaagcgtgcccttatt
cagtgtgcaaaggatattgctaaagcatcggatgaagtcactcggttggccaaagaggtg
gcaaagcaatgcactgacaagcggattagaacaaacctcttgcaggtctgtgagcgaatc
ccaaccatcagtacacaactcaaaatcctctccactgtcaaagctactatgctgggcaga
actaatatcagtgatgaagaatcggaacaggcaactgagatgttggttcataatgcccag
aacctcatgcagtctgtaaaggaaactgtgagagaagctgaagcagcttccattaagatt
agaacagatgctggattcaccctgcgctgggttagaaagactccgtggtatcagtag

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