Apteryx rowi (Okarito brown kiwi): 112961021
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Entry
112961021 CDS
T07573
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04510
Focal adhesion
arow04517
IgSF CAM signaling
arow04518
Integrin signaling
arow04519
Cadherin signaling
arow04520
Adherens junction
arow04810
Regulation of actin cytoskeleton
arow04820
Cytoskeleton in muscle cells
arow05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112961021 (VCL)
04518 Integrin signaling
112961021 (VCL)
04519 Cadherin signaling
112961021 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112961021 (VCL)
04520 Adherens junction
112961021 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112961021 (VCL)
04810 Regulation of actin cytoskeleton
112961021 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112961021 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arow04812
]
112961021 (VCL)
04147 Exosome [BR:
arow04147
]
112961021 (VCL)
Cytoskeleton proteins [BR:
arow04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112961021 (VCL)
Exosome [BR:
arow04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112961021 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Spectrin_SYNE1_2
Motif
Other DBs
NCBI-GeneID:
112961021
NCBI-ProteinID:
XP_025911600
Ensembl:
ENSARWG00000003884
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIFFLTYGTMFTAMKIFVTTKNSKSHGIEEALK
NRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPN
APPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPM
AMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHI
RGIMAEARKVAELCEEPKERDDILHSLGEISALTAKLSDLRRHGKGDSPEARALAKQIAT
SLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRR
LANVMMGPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQ
EAMTQEVSDVFSDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAA
AVGTANKTTVEGIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEK
MTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAK
REVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKCFLDSGYRILGAV
AKVREAFQPQEPDFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQ
KAGEAINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALI
QCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGR
TNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtagcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggcaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccacccgcatttatcaaa
gtggagaatgcctgcaccaaacttgttcgggcagcccagatgctgcaagcagatccttat
tccgtcccagctcgtgactatctcattgatggatcgagaggcatcctttctgggacgtca
gacttgcttctgacattcgatgaagccgaggtccgtaaaatcatccgtgtctgcaaagga
attttggaatatctgactgtggcggaagtagtagagactatggaggatttggtgacatac
acaaagaatctagggccaggaatgacgaagatggccaaaatgattgatgagagacagcag
gaattaacgcaccaggaacatagagttatgctggtaaactcaatgaatactgtgaaagag
ctattgccagtacttatttcaggtattttttttctaacctatggtaccatgttcacagct
atgaaaatttttgtaaccacaaaaaactctaaaagccatggaatagaagaggccttgaaa
aatcgcaatttcacagtagagaaaatgagtgctgagataaatgaaataatccgtgtatta
caactcacttcctgggatgaagatgcctgggccagcaaggacactgaagccatgaaaaga
gctttggccttaatagattcgaagatgaaccaggcaaaagggtggctgagagatccaaat
gcacctccaggggatgctggtgagcaagcaataaggcagatccttgatgaagctggaaaa
gcgggagaactgtgtgccggcaaagaacgcagagagattctgggaacatgcaaaacactg
ggccagatgacggatcaactggctgatctccgagccagaggacagggtgctacaccaatg
gctatgcagaaagcacagcaggtgtcacaaggtctggacttgctcactgcgaaagtggag
aatgcagcccgcaagttggaagccatgacaaactctaagcaggcaattgctaagaagatt
gatgctgctcagaattggctagcagatcctaatgggggcagcgaaggagaagaacatatt
cggggaattatggctgaggcaaggaaagttgcagaattatgtgaagagcctaaggaaaga
gatgacatccttcactccttgggagaaatctctgctttgacagctaagctgtcagatcta
cgaagacacggaaaaggtgactctccagaggcccgtgcattggctaagcaaatagctaca
tcacttcagaatttacaatccaaaacaaacagggctgtagcaaatactaggccggttaag
gcagctgtccatttggaaggcaagattgagcaagctcaaaggtggatagacaatcctact
gttgacgatcggggagtaggccaggcagcaattcggggactggttgcagaaggtcgtcgt
ttagccaatgtcatgatgggaccttatcgtcaagacctgcttgccaaatgtgaccgtgta
gaccagctggctgctcagctagccgacctcgcagcgagaggggagggagagtctcctcag
gctagggcaatcgctgctcagcttcaggactcactcaargatcttaaaacacggatgcaa
gaagcaatgacccaggaggtttctgatgtttttagtgacactacaactcccattaaattg
ttagcagtagcagccactgctccttctgatgctcccaatagggatgaggtgtttgatgaa
agagcagcgaactttgaaaaccatgctgccagactgggagctacagcagaaaaagcagct
gcagttggaacagctaataaaactactgtggaaggcattcaggcaactgtgaaatcagca
agagaacttaccccacaggtagtatcagctgcccgtattctcctgagaaatcctggaaat
caagctgcttatgagcattttgagaccatgaaaaaccaatggattgataacgtagaaaaa
atgacagggttggtggatgaagccattgatactaagtctctgttggatgcatcagaagag
gctattaagaaagatcttgataaatgtaaagttgcaatggccaatattcaacctcagatg
ctggtagctggtgccaccagcattgctagacgagcaaaccgcatcctactggttgcaaaa
cgggaggttgaaaattcagaggaccctaaattccgggaggctgttaaagcagcctctgat
gagctaagcaaaactatatcgccaatggtaatggatgcgaaagctgtggcaggaaacatt
tctgatccgggtttacagaagtgtttcttggattctggatacagaatcctgggagctgta
gccaaagtcagagaagccttccagcctcaggaaccagattttccacctcctcctccagac
cttgagcagcttcatctgactgatgagcttgcccctccaaaaccaccactaccagaaggt
gaggttcccccacccagaccgccaccacctgaagaaaaggatgaagagttcccagagcag
aaagcaggagaagctattaatcagcccatgatgatggctgctaggcagttgcatgatgaa
gctcggaaatggtctagcaagggtaacgatatcattgctgctgcgaagcggatggcgctg
ctaatggcagagatgtctcgcctggtgagaggaggtagtgggaacaagcgtgcccttatt
cagtgtgcaaaggatattgctaaagcatcggatgaagtcactcggttggccaaagaggtg
gcaaagcaatgcactgacaagcggattagaacaaacctcttgcaggtctgtgagcgaatc
ccaaccatcagtacacaactcaaaatcctctccactgtcaaagctactatgctgggcaga
actaatatcagtgatgaagaatcggaacaggcaactgagatgttggttcataatgcccag
aacctcatgcagtctgtaaaggaaactgtgagagaagctgaagcagcttccattaagatt
agaacagatgctggattcaccctgcgctgggttagaaagactccgtggtatcagtag
DBGET
integrated database retrieval system