Apteryx rowi (Okarito brown kiwi): 112961333
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Entry
112961333 CDS
T07573
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112961333 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arow03036
]
112961333 (CHD8)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112961333 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112961333
NCBI-ProteinID:
XP_025912142
Ensembl:
ENSARWG00000008407
LinkDB
All DBs
Position
Unknown
AA seq
2379 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDALTDEGFAPAPHDPIEEALGLAGALEEPPPAPENAPPEPENA
PPDPPPPPLPPREPPAPDAPPEQDVLSQGNPFMGVSATAPAPSSSSSSSAAALPAPKIVI
LKAPAGGSAPGAHVAQLQAPAQPLGAANGGKVTFAKVLTGTPLRPGVSIVSGNAVLAGKV
TPAGPGAAAVHRLVQPGRPVKQLVLQPVKPPGAGAPLKPAVTLTSAPTQGESKRITLVLQ
QPPGANATAGQRHVVLGSLPGKIVLQGNQLAALGQAKGTPGQPAKVVTIQLQVQQQPPSA
APPGTQPGANPQKIQLLQQPPAAGQPAPVAVSSVPPAQVVGSAGQRLTVPLKVVLQPQAG
SSQGGSPGLSVVKVLSSGEVAALSGPGSRGASEESRKLEHQKKQEKANRIVAEAIARARA
RGEQNIPRVLNEDELPSVRPEEEGERKRRRKGPAERGGPKEERPRKGKGQGGAGKSKGRG
KPSTITPVVGKKRKRNASSDNSDAEVMPAPSPREEEESSVQKRRSNRQVKRKKYTEDLDI
KITDDEEDEELDVTGPVRPEQPPAPQPPVPEPEPEGETLPSMQFFVENPSEEDAAIVDKV
LSMRVVKKELPSGQFTESEEFFVKYKNYSYLHCEWATIDQLEKDKRIHQKLKRFKTKMTQ
MRHFFHEDEEPFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELKEDV
DEGKIGEFKRIQARHPDLKRVARPQAGSWKKLELSHEYKNHNQLREYQLEGVNWLLFNWY
NRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFLVIAPLSTITNWEREFNTWTEMNSI
VYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVII
DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSEAEFLK
DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK
NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFRESCHHHVPHDFHLQ
AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQKRYLYERIDGRVRGN
LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI
GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREGNIAGIQQFSKKEIEDL
LRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDI
ALDDPNFWQKWAKKADLDLDLLNSKNNLVIDTPRVRKQTRHFSTLRDDDLVEFSDLESED
EERPRSRRHDRHHHTLHHAYGRTDCFRVEKHLLVYGWGRWREILSHGRFKRRLSERDVET
ICRAILVYCLLHYRGDENIKGFIWDLISPAENGKAKELQNHSGLSIPVPRGRKGKKVKSQ
STFDVHKAEWIRKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLA
GAVASDIDIWFPLVEQLEVPTAWWDAEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAG
RPDEKAIAAEQRLDVAEGVDFDKDCEDPEYKPLPGTAKEPDDETDPLMLLDEEISVVDGD
EGQPAQPGQLFWPPGSALTARLRRLITAYQRSYKQEQLKMEAAERGDRRRRRCEAACKLK
EMARREKQQRWTRREQADFYRVVSSFGVEYDPDARRFRWGRFRALARLDRKTDESLTKYF
HGFVAMCRQVCRLPPAAGDEPPDPAVFIEPVSEERASRTLYRVDLLRRLREQVLCHPLLP
ERLALCQPPGPELPPWWESGRHDGELLRGAARHGLARAEAAIMNDPDFSFLAARFGFCQG
RAGTPQPPAAAPLPVPPPVLPPKPDSAEDSDSELDLGKLSASTSESSSCSEDSDDDRGPD
PAGGTKLFEEEESLLSLPTSREGDSPQPLALGLPPEQPHLREWPKDRALIHRIDLVCQAV
LSGKWPAAPQRSPEPGGGQADSGTRLPPDYATPREEPPAPYTRLRHGPEDKEFTVQIKDE
EGIKLTFQKHRLVPNGALRDRCQHLHPPGHKKNSKKLVELELQCLEGLRGPDIDLEARIP
VVHKGDGTLLVGDAAPRRADLESWLQAHPDFAVDPRFLAYMEDRRKQHKWHRCKKTGTVE
AGCLPGLERGTVPGEANSKKGFLPDPVMSRLLPEGSPKLRGRRAGVDLSKMVSLMGPAGP
GLLGGLHGPFAPGPAPGSYAAVAAAAASSSAALLHPGAFALAPRHNEEDEEDEEDEEEEE
DEMDDLSQGYASSERDFSLLDDPMMPANSDSSDGANEAE
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccatcatggacctcttcgacgaccccaatctcttcggactggacgcgctg
acggacgaaggcttcgctccggccccccatgaccctatcgaggaggcgctggggctggca
ggggcactggaggagccgccgccagcacccgaaaacgccccaccagagcccgaaaatgcc
ccgccggaccccccgccaccgccactgccgccccgggagccgccagcgccggatgccccg
ccggagcaggatgtgctgagccaagggaaccccttcatgggggtgtccgccacagccccg
gcgccttcctcctcctcctcttcctctgccgcggctctgccggctcccaaaatcgtcatc
ctgaaggccccggcgggtggctcggcgcccggcgcccacgtggcgcagctccaggcgccg
gcccagccgctgggggcggccaacgggggcaaggtgacctttgccaaagtgctcacgggc
accccgctccggcccggtgtctccatcgtctccggtaatgccgtgctggctggcaaagtg
acaccggctgggccgggtgctgccgccgtccaccgcctggtgcagccaggacggcccgtg
aagcagctggtgctgcagcccgtgaagccgccaggtgctggggcgcccctgaagcccgcc
gtcaccctcacgtcggctcccacccagggcgagtccaagcgcatcaccctggtgctgcag
cagccaccgggtgccaacgccaccgctgggcagcgccacgtggtgctgggcagcctgccg
ggcaagatcgtcctgcagggcaaccagctggccgccctcggccaagccaagggcacgccg
ggccagccggccaaggtggtcaccatccagctccaggtgcagcagcagccgccgtcggcg
gcgccgccaggcacccagcccggcgccaacccccagaagatccagctgctccagcagccc
ccggccgcagggcagccggcgcctgtggccgtctcctccgtgcccccggcgcaggtggtg
ggcagtgcgggccagcggctgacggtgcccctcaaggtggtgctgcagccccaggccggc
tcgtctcagggcggctcgccagggctgtcagtggtgaaggtgctgagtagcggcgaggtg
gcggcgctgtcgggccccggctcgcggggcgcctcggaggagagccgcaagctggagcac
cagaagaagcaggagaaagccaaccgcattgtggccgaggccatcgcccgggcccgggcc
cggggcgagcagaacatcccccgcgtcctcaacgaggacgagctgcccagcgtgcggccc
gaggaggaaggcgagcgcaagcgccggcgcaaagggcccgccgagcgcggcggccccaag
gaggagcggccccgcaagggcaagggccagggcggcgctggcaagagcaagggccgcggc
aagcccagcaccatcacccccgtggtggggaagaagcggaagcgcaacgcctcctccgac
aactcggatgccgaggtgatgccggccccgtcgccccgggaggaagaggagagcagcgta
cagaaacggcgctcgaaccgccaggtgaagcgcaagaagtacaccgaggacctggatatc
aaaatcaccgatgacgaggaagacgaagagctggatgtgaccgggccggtgcggcccgag
cagccaccagccccgcagccccccgtgcccgagcctgagcccgagggcgagaccttgccc
tccatgcagttctttgtggagaaccccagcgaggaggacgctgccatcgtggacaaggtc
ctctctatgcgggtggtgaaaaaggagctcccgtcggggcagttcacggagtcggaggag
ttcttcgtcaagtacaagaactactcctacctgcactgcgagtgggccaccatcgaccag
ctggagaaggacaagaggatccaccagaagctgaagcgcttcaagaccaagatgacrcag
atgcggcacttcttccacgaggacgaggagcccttcaacccagactacgtggaggtggac
cgcatcctggacgaatcccacagcgtcgacaaggacaacggggagccggtggtctactac
ctggtgaaatggtgctccttgccctaygaggacagcacctgggagctgaaggaggacgtg
gacgagggcaagatcggggagttcaagcggatccaggcgcggcacccggatctcaagcgc
gtggcccggccccaggcgggctcctggaagaagctcgagctgtcccatgagtacaagaac
cacaaccagctccgcgagtaccagctcgagggcgtcaactggctgctcttcaactggtac
aacaggcagaactgcatcctggccgacgagatgggcctgggcaaaaccatccagtccatc
gccttcctgcaggaggtgtacaacgtgggcatccgtggccccttcctcgtcatcgcgccg
ctctccaccatcaccaactgggagcgggagttcaacacctggacggagatgaacagcatc
gtctaccacggcagcctggcctcacggcagatgatccagcagtacgagatgtactgcaag
gactcccggggccgcctcatccccggggcctacaagttcgacgcgctcatcaccaccttt
gagatgatcctgtcggactgcccggagctgcgggagatcgagtggcgctgygtcatcatc
gacgaagcccaccggctcaagaaccgcaactgcaagctgctcgacagcctcaagcacatg
gacctggagcacaaggtcctcttgacgggcacccccctgcaaaacacagtggaggagctc
ttcagcctgctgcactttctggagccttctcagttcccttctgaagccgagttcctcaag
gactttggagacctcaagacggaggagcaggtgcagaagctgcaggccatcctcaagccc
atgatgctccggcggttgaaggaggatgtggagaagaaccttgctcccaagcaggagacc
atcattgaggtggagctgacaaacatccagaagaaatactaccgggccatcctggagaaa
aacttctcyttcctgtccaagggtgctggccacaccaacatgcccaacctactcaacacc
atgatggagctgcggaaatgttgcaaccacccctacctcatcaacggcgcggaggagaag
atcctgaccgagtttcgggagtcrtgccaccaccacgtgccccacgacttccacctccag
gccatggtgcgctcggccggcaagctggtgctcatcgacaagctgctgcccaagctcaag
gccggcggccacaaggtgctgatcttctcccagatggtgcggtgcctcgacatcttggag
gactacctcatccagaagaggtacctgtacgagcggatcgacgggcgggtgcgcggcaac
ctgcggcaggccgccatcgaccgcttcagcaagcccgactcggaccgcttcgtgttcctg
ctgtgcacccgggcgggcgggctgggcatcaacctcaccgccgctgacacctgcatcatc
ttcgactccgactggaacccacagaacgacctccaggcccaggcgcggtgccaccgcatc
gggcagagcaaggcggtgaaggtctaccgcctcatcacgcgcaactcgtacgagcgggag
atgttcgacaaggccagcctcaagctgggcctcgacaaggctgtgctgcagtccatgagt
ggccgcgagggcaacatcgctgggatccagcagttctccaagaaggagatcgaagacctg
ctgcgcaagggggcctatgctgctatcatggaggaggatgatgagggctccaagttctgc
gaggaggacatagaccagatcctgctgcgccgcaccaccaccatcaccatcgagagcgag
gggaagggctccacctttgccaaggcgagcttcgtggcctccgagaaccgcaccgacatc
gccttggacgaccccaacttctggcagaagtgggccaagaaagccgacctggacctggac
ctgctcaacagcaagaacaacctggtgatcgacacgcctcgggtgcgcaagcagacacgg
cacttcagcaccctgcgcgacgacgacctggtggagttctctgacctggagagcgaagac
gaggagcggccccgctcccggcgccacgaccgccaccaccacaccttgcaccacgcctac
ggccgcactgactgcttccgcgtcgagaagcacctcctggtctacggctgggggcggtgg
cgggagatcctgtcacacgggcggttcaagcggcgcctctcggagcgggacgtggagacc
atctgccgggccatcctggtctactgcctgctgcactaccggggcgacgagaacatcaag
ggcttcatctgggacctcatcagccctgcagagaacggcaaggccaaggagctgcaaaac
cactcgggcctctccatcccagtgccccggggccgcaagggcaagaaggtgaagtcgcag
agcaccttcgacgtccacaaggccgaatggatccgcaagtacaaccccgacaccctcttc
caggacgagagctacaagaagcatctcaagcatcagtgcaacaaggtgctgctccgggtg
cgcatgctctactacctgcgtcaggaggtgatcggtgaccaggccgagaaggtgttggcg
ggggcagtggccagcgacatcgacatatggttcccactggtggagcagctcgaggtgccg
actgcctggtgggacgccgaagctgacaagtccttgctcatcggcgtcttcaaacacggc
tatgagaagtacaacaccatgcgcgccgaccccgcgctctgcttcctggagaaagccggc
cggcccgacgagaaggccatcgccgctgagcagcgcctggacgtcgctgagggcgtggat
ttcgacaaggactgcgaggaccccgagtacaagccactgccggggacggccaaggagccg
gacgatgagaccgacccgctgatgctgctggacgaggagatctccgtggtggacggcgac
gaaggccagccggcccagccggggcagctcttctggccaccrggctcggcgctgacggct
cggctccggcgcctcatcaccgcctaccagcgcagctacaagcaggagcagctgaagatg
gaggcggccgagcggggcgaccgccggcgccggcgctgcgaggccgcttgcaagctcaag
gagatggcacgacgcgaaaagcagcagaggtggacacggcgggagcaggcggatttctac
cgggtggtgtcgagtttcggcgtggagtacgaccccgacgcccggcgcttccgctggggc
cgcttccgtgccctggcccgcctggaccgcaagacggacgagagcctcaccaagtacttc
catggcttcgtggccatgtgccggcaggtctgccgcctgccaccggctgccggcgacgag
ccgccggaccccgcggtgttcatcgagcccgtctcggaggagcgggcctcccgcaccctg
taccgcgtggacctgctgcggcgcctgcgggagcaggtgctgtgccacccgctgctgccc
gagcgcctcgccctctgccagccccccggccccgagctgcccccgtggtgggagagcggc
cgccacgacggcgagctgctccgcggcgccgcccgccacggcctggcccgggccgaggcc
gccatcatgaacgaccccgacttctccttcctcgccgcccgcttcggcttctgccagggg
cgcgcggggacgccgcagccccccgccgccgccccactgcctgtgcccccgccggtgctg
ccccccaagcccgactcggccgaagactccgactcggagctggacctcggcaagctctcg
gcctccacctccgagtcgtcctcctgctccgaggacagcgatgacgaccgggggccggac
ccagctggcgggacgaagctctttgaggaagaggagtcgctgctgtcgctgcccacttcc
cgggagggtgactcaccacagcccctggccctggggctgccgccagagcagccgcacctg
cgcgagtggcccaaggaccgggctctcatccaccgcatcgacctggtgtgccaggccgtg
ctgtcgggcaagtggccggcggccccccagcgcagccccgagcccggcgggggccaggcg
gacagcggcacccggctgccccccgactacgccaccccccgggaggagccgccrgcaccc
tacacccgcctgcggcacggccccgaggacaaggagttcacagtgcagatcaaggatgag
gaaggcatcaagctgacgttccagaaacaccggctggtgcccaatggcgccctgcgggac
cgctgccagcacctccacccgcccggccacaagaagaacagcaagaagctggtggagctg
gagctgcagtgcctggaggggctgcggggccccgacatcgacctggaggcccgcatcccc
gtggtgcacaagggcgacggcacgctgctggtgggcgacgcggctccccgccgcgccgac
ctggagagctggctgcaggcgcaccccgacttcgccgtggacccccgcttcctggcgtat
atggaggaccgccgcaagcagcacaagtggcaccgctgcaaaaaaaccggcacygtggag
gctggctgcctgcccgggctggagcgagggacggtgcctggcgaagccaacagcaagaag
ggcttcctgccagaccccgtgatgagccggctgctgccggagggcagccccaagctgcgg
ggccgccgggccggcgtggacctctccaagatggtgtcgctgatgggaccggcggggcct
ggcttgctgggggggctgcacggccccttcgcccccggcccggccccgggctcctacgcc
gctgtggccgccgccgccgcttcgtcctcagccgccctgctgcaccccggcgccttcgcc
ctggccccccgccacaacgaggaggatgaggaggacgaggaggacgaggaggaggaggaa
gacgagatggacgacttgtctcagggctatgccagctccgagcgggatttctccctgctc
gatgaccccatgatgccggccaactcggactccagcgacggggccaatgaggccgagtga
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integrated database retrieval system
