Apteryx rowi (Okarito brown kiwi): 112961886
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Entry
112961886 CDS
T07573
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112961886 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arow02000
]
112961886 (ABCA4)
Transporters [BR:
arow02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
112961886 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
SRP54
Motif
Other DBs
NCBI-GeneID:
112961886
NCBI-ProteinID:
XP_025913363
Ensembl:
ENSARWG00000014968
LinkDB
All DBs
Position
Unknown
AA seq
2333 aa
AA seq
DB search
MSFFRQVRLLLWKNWVIRKRQKLRFLVELVWPLSLFLALVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLQGIFCNMNNPCFRSPTRGEGPGVVSNYNNSILARVYQDAQELILKAPEIH
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLEDADLPDDVIFQ
LINAQVRPEQFAYGVPNLTLKDIACSQMLLERFIIFSSQRGLPSVHRAMCALSQESLQRV
ENALYANVDFFKLFQLLPTVLDRNSPGADLRSWGRMLSNVARAVQELARKPSIQDLLVVL
QPFVQDGEPESLGHLLNSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDTTKKKSSY
LYDNTTTPFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPVVRQILKNANSTFEE
LERLGLLTKAWQEVGPQLWHFFQNSLQMNMIRDSLKHPTVRGFLNSQLGAEGLTAEDIIN
FLHNGSPGSREKGMADFDWRNIFSVADQALRLLSQYLECLTLDKFEGHLDETQLTRQALH
LLEENKFWAGVVFPDIEPRANSLPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMVEHGIIKTQTNTEVPLGIYLQQMPYPCFVDDVFMITLNRSFPIFTV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGVTNGVIWCAWFLDSFITMTGSTFLLTALIM
CGQVLQYSSPPLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
VWQDHMTVNLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
KMMLFDAFLYGILSWYIENVFPGDYGLPQPWYFPLQESYWLGSGHPKAEKTANASEKSPK
SEGCVDQKAMEGEKNESRTEKSEEPEKPEAKSGSQGQKDGKNKQCKHKRKKQPGEQGKPK
AGVQDKDEMNINTFFEPEPTGLIPGVCIENLVKIFANRSKPAVDGMNITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLIGGLDIQTHMDSIRQRLSMCPQYNILFNHLTVAEH
ILFYAQLKGRSRDEAEQELETMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADVLGDRVAIISQGKLFCSGS
PVFLKNCFGSGFYLTLVRKMKSTRSGGDASLCSCGSQCSCSCSSCTRRNKEGAPEQELDG
DLNELAEIIHHHIPGAKLIESIGQELIYLLPNKHVKQRSFASLFRELEETLDDLGLSSFG
VSDMPLEEVFLKVTAEADSGMQKAGGAQVNSSTLGKMFTENKTAEQTPLETNDTSQMPVG
VAGDGNEGKGSRQYKGFQLVRQQIKALLIKRFHHATRSRKDFLSQVILPASFVLLSLILT
VFIPPFGEYPTLTLHPWIYGQQFTFFSNEQPGSEQMISLTDAFLNKPGFGNRCMKNQPLP
NYPCTNMPTVWNTPAVHPNLSSLLLSHKWSPENPSPSCKCSTHKKLTMLPECPAGAGGLP
PPQRVQHSTEILQDLTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGKLPVLH
VSGDQVIDFLSDLGRMMNVTGGETSLAASKEISNFLKYMETEDNIKVWFNNKGWHAMVSF
LNVANNGILRANLRIGQAPEKYGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERVTKAKHLQFVSGVSPAVYWLTNFLWDIVNYAMSAGLVVGIFTGFN
KKAYTSPTNLPVVVALLLLYGWAVIPMMYPAASFFSVPSTAYVALSCINLFVGINSSAIT
FILDLFENNPSLLKFNKTLKNVLIVFPHFCLGRGLIDLAMNQAVSEVYARFGEEHVSNPF
QWDFVGKNLVAMAVQGIAYFILNLLMQHHLFSTGWFAETTNSPIIGEDEDVAEERKRIMN
GGNKTDILQLQELTKIYAGRNKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFRMLTGDTD
VTSGDAVVAGNSILTHISNVHQNMGYCPQFDAIDDLLTGREHLYLHACLRGVPAEEIKRV
AEWGIRKLGLPMYADQLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRHLLW
DSIVSVLRDGRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQQLKYKFGDGYIVTLK
IKAPKSGLPPDPSPAEQFIHTNFPGSLQREKHYNMLQYQICSSSLAKIFRLIISNKENLH
IEEYSISQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREAKVSPALPQQAVA
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttcaggcaagtcagacttctgctatggaagaactgggtcatccggaaaagg
caaaagcttcgttttcttgtggagcttgtatggcctctgtcattatttcttgcccttgtc
tggctgaggaaagctaatccactgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatctgcaggaacactgccgtggttacagggcatcttctgtaacatgaacaaccct
tgtttccgcagccctacccgtggagagggtcctggtgttgtgtccaactacaacaattct
atccttgcaagagtatatcaagatgctcaggagctcatactgaaagcccctgaaatccat
gaccttggcagaatctgggaagaactgatcattatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagagggattcgaattctagatattttgaaagatggg
gagactctcacttccttcttgctggaagatgctgacctcccagatgatgtcattttccag
cttattaatgctcaagtgcgccctgaacagtttgcctatggtgtccctaacttgactctg
aaggacattgcttgcagtcagatgcttctggaacgctttattatcttcagcagccaaagg
ggccttccttctgtgcacagggccatgtgtgccctctcccaggaaagcctacagagagta
gaaaatgccttgtatgcaaatgttgatttctttaagctatttcagctgcttcccactgtg
ttggacagaaactcaccaggtgctgatctgaggtcctgggggaggatgctgtctaatgtc
gcccgagcggtgcaagagctagccaggaagccaagtattcaggaccttttggtggttctg
caaccatttgttcaagatggagagccagaatccttaggccacttgctgaactccctgtct
gatcttttctgtggctacccggaaggaggtggatccagagtgctttccttcaactggtat
gaagataataactacaaagccttcctggggattgatactacaaagaaaaaatccagttat
ctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcacctgttgtgcgacaaatcctaaaaaatgcaaactccacatttgaggaa
cttgaacgcctcggactgttgaccaaagcctggcaagaagtaggacctcagctgtggcac
ttctttcaaaacagcctgcaaatgaacatgatccgtgactctctgaagcaccctacagtg
aggggcttcttgaacagccagctcggtgctgaaggcttaactgcagaagacataatcaac
tttctccacaatgggtccccagggagccgggagaagggaatggcagacttcgactggcgg
aacatcttcagtgttgcagatcaagctctgcgtttgctcagtcagtatctggagtgctta
actttggataaatttgaaggccatcttgatgaaacccagctgactcgtcaagctcttcat
ttgctagaagaaaacaaattctgggctggtgtggtttttcctgatatagagcccagagcc
aacagtcttccaccacatgtgaaatacaagattcgaatggacatagatgcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagccgatcctgtggatgac
ttacgttacatctggggaggctttgcatatctccaagacatggttgagcatgggattata
aagacccagaccaacactgaagtgccattaggaatttatttgcagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcaccttaaaccgctcctttcccatcttcacggtg
cttgcttggatctattcagtttccatgactgtgaagagtatagtgctggagaaggaaatg
cgtctgaaagaggctatgaagaacaggggcgtcactaatggagtgatctggtgcgcttgg
ttcctagacagcttcatcacgatgactgggagcacattcctcctgacagcactgattatg
tgcggccaagtgctacagtatagcagtccacctctcttctttcttttcctactgacgttt
accacagccaccataatgcagtgtttcttgttcagcaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgccccacatagtctgcttt
gtctggcaagaccacatgactgttaatctgaagatcctagcaagcttgctttctcaagta
gcttttggtttcggcacagaatatttgtcacgctatgaagagcaaggtcttggtctacag
tggggtaacatcagaaccagtcccttagaaggagatgaatatagttttctattttccatt
aaaatgatgctttttgatgcttttctgtatggaatactttcttggtacattgaaaatgtt
tttccaggggactatgggctaccacagccttggtatttccctctgcaggaatcttactgg
cttggctctggacacccaaaagctgagaaaacagcaaatgctagtgaaaaaagtccaaaa
tcagaaggctgtgtggaccagaaggccatggaaggagaaaaaaatgaaagcagaacagag
aaatctgaagaacctgaaaagccagaagcaaagagtggcagccaggggcagaaggatggt
aaaaacaaacaatgtaaacacaaacgaaaaaaacaacccggtgagcaggggaagcctaaa
gcaggtgtccaggacaaagatgaaatgaatataaataccttctttgagcctgagccaaca
ggattgattccaggagtgtgcattgagaacctggtgaagatttttgcaaacaggtccaag
ccagcagtagatgggatgaatattactttttatgagggccagatcacagccttccttggt
cacaatggagcaggaaagacaaccaccatgtcgatactgacaggcctgttcccaccgacc
tctggaactgtgctgattggtggcctggatattcaaactcacatggactccattcggcag
agattaagcatgtgccctcagtacaacatcttattcaatcaccttactgtagcagagcac
atcttgttttatgcccaactgaaagggagatccagggatgaagctgagcaagagctggaa
acgatgctggaagacatgggcctcacccataaaaggaatgaagaggctcagaatttgtca
ggtggaatgcaaaggaaactctctgttgccattgccttcgttggtgaagcaaaagtggta
gtcttggatgagcccacttctggagttgatccatattccaggcgatctatctgggatctt
ctgctaaagtaccgctcaggcagaaccatcatcctgtcaacacatcatatggatgaggca
gacgtccttggagacagagttgccatcatatcccaaggaaaactcttttgttcaggctct
ccagttttcctaaagaactgctttggatctggcttctatctcacccttgttcgcaagatg
aaaagcaccagaagtggaggggatgcatccctctgtagctgtggatctcagtgctcctgc
tcctgctccagctgtacacgcaggaataaagaaggtgctccagagcaggaactggatgga
gatcttaatgagctagcggaaataattcatcatcatatcccaggagcaaaattaattgaa
agcattggtcaggaactcatttaccttttgcccaataaacacgttaaacagcgatctttt
gccagtctcttcagagaactggaggaaacattggatgacctgggactcagcagcttcgga
gtttcagatatgccacttgaagaggttttcctaaaggtcacagcagaagctgactctgga
atgcaaaaagcaggaggtgctcaagtaaacagttctactctgggcaaaatgtttactgag
aacaagacagctgaacaaactccactagaaaccaatgacacttctcaaatgccagtaggc
gtagcaggagatggaaatgaaggcaaagggtcccggcagtataaaggttttcagcttgta
cgtcagcagatcaaagcactgctcatcaaacggttccatcacgctactcgcagccgcaaa
gacttcctatcccaggttattctgcctgctagttttgtgttgctgtctttaatacttaca
gtctttattcccccatttggagaatatcccaccttaaccttacacccttggatctatgga
caacagtttactttcttcagcaatgagcagcctggcagtgagcagatgatctccctcact
gatgctttcttgaataaaccaggatttggaaatcgctgcatgaagaatcagcctcttccg
aactacccctgcactaatatgccaactgtctggaatacccctgctgttcatcctaaccta
agcagcctcctgctaagccacaagtggagccctgagaatccttcaccttcctgcaagtgc
agcactcacaagaaactcactatgctgccagagtgccctgcaggagcgggaggcctccca
ccaccacagagagtgcagcacagcacagaaattcttcaagatctgacccacagaaacatt
tcagattttctagtgaaaacatatcccaccctgataaaagggagcttgaagagcaaatac
tgggtcaatgagcaaagatatggaggaatttctataggaggaaagctcccagtccttcat
gtttctggagatcaagttatcgattttttaagtgatctcggccgaatgatgaatgtgaca
ggaggagaaacttcactggctgcttctaaagaaatttctaatttccttaaatacatggaa
actgaagataatattaaggtgtggtttaacaataaaggctggcatgctatggttagtttc
cttaacgtagccaataatggaatccttagagctaacttgcgaattggccaagcccctgag
aaatatggaatcactgctataaaccatcctctgaacctcactaaggagcagctctctgaa
gtcactgtgttgaccacttcagtggatgctgttgttgccatctgtgtgatttttgccatg
tcctttatcccagccagttttgttttgtacctgattcaagaacgtgtgacaaaagccaag
cacctccagtttgtcagtggtgtgagccctgctgtctactggttaactaacttcctgtgg
gacatagtgaattatgcaatgagtgctggattggttgtgggtatattcactggattcaac
aagaaagcatacacttctccaactaatctccctgtggttgttgccttgctgcttctgtat
ggatgggcagtaattcccatgatgtaccctgctgcttctttcttcagtgtccctagcact
gcttatgttgcattgtcttgtattaatctctttgtggggatcaacagcagtgccattaca
ttcatcctggacttgtttgaaaataacccgtccttgctgaaatttaataaaacattgaaa
aacgtgctgattgtcttcccgcatttttgcctgggccgtggactcattgacttggccatg
aaccaagctgtgagtgaagtatatgccaggtttggcgaggaacatgtctccaatccattt
cagtgggactttgttggaaagaaccttgttgccatggctgttcaggggattgcatacttc
attctgaatctgcttatgcagcaccatttgttctctacaggatggtttgctgagactacc
aattcacctattattggtgaagatgaggatgttgcagaggaaagaaaaagaattatgaat
ggagggaacaaaacagatatcttacaactgcaagaactgaccaagatttatgcaggtagg
aacaagccagcagtggacagactctgtgttggcatccgtcctggagagtgctttggtctt
ctgggagtgaatggcgctggcaaaacaacaacattcagaatgcttactggggatactgat
gtgacgtctggagatgctgtagtggctggcaacagtatattgacccacatctctaatgtc
catcaaaacatgggatactgccctcagtttgatgccattgatgacctgctcacaggacgg
gaacatctctacttacatgcatgcttgcggggggttccagcagaggaaatcaagagggtt
gctgagtggggcatccggaagctgggacttcctatgtatgcggaccagctggctggtacc
tacagtggtggcaacaagcgcaagctctccactgccattgcactgataggctgcccacca
ctagtcctactagatgaaccaactactggaatggaccctcagtcccgacacctcttatgg
gactctattgtcagcgtgctcagagatggacgagctgtggttctgacctcgcacagtatg
gaagaatgtgaagctctctgtactcgtttagccatcatggtaaaaggaaccttcaaatgc
ctgggcacaattcagcagctcaaatacaagtttggagatggctacattgtcactctgaaa
atcaaagctccaaagtctgggctacctccagatccgagtcctgccgagcagttcatacac
acaaacttcccagggagtttacagagagagaaacactacaacatgctgcagtatcagatt
tgctcctcctctctggctaagatctttcggttaataatctccaataaggaaaacttgcat
attgaagaatactctatctctcaaacaactttagatcaggtttttgtgaactttgctaaa
cagcagatggaggatgaggaaattcctttgcatccccgtgcagccggagccagccgagaa
gcaaaggtgtcccctgctttgcctcaacaggcagttgcataa
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integrated database retrieval system
