Apteryx rowi (Okarito brown kiwi): 112962478
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Entry
112962478 CDS
T07573
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03020
RNA polymerase
arow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112962478 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
112962478 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112962478 (POLR2A)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112962478 (POLR2A)
Enzymes [BR:
arow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112962478 (POLR2A)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112962478 (POLR2A)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112962478 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_1
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
112962478
NCBI-ProteinID:
XP_025914453
Ensembl:
ENSARWG00000013707
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
IALCEGRKGERAGIWGACGVWGPPPKSGRRAQRAGICGSPSVPRFPQPVFSLLPSQKRMS
VTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVF
HVGFLGKTMKILRCVCFFCSKLLVDSAAAAARHPQDDLTHKLADIVKINNQLRRNEQNGA
AAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKR
VDFSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKY
IIRDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILP
WSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIV
QDTLTAVRKFTKRDVFLERERILEVPMGCPWEGHLGGAPRRAGGTPRQVTGLQGQFRSPG
GRRWGAGGGGRGSGSPPLTPSPAPAQVIVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEEMVKDILSNAHIQNELEREFEKMRE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLV
IVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPD
FDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSTIPGLGVGGPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS
PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS
PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP
KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
attgcgctttgtgaaggccggaaaggcgaaagagcgggaatttggggtgcctgtggggtt
tggggacccccccccaaaagcgggcgccgggctcagagagctgggatttgcggctcgccc
tccgtgcctcggtttccccaacccgttttctccctcttgccttcgcagaaacgcatgtcg
gtgaccgaagggggcatcaagtaccccgagaccacggagggggggcgccccaagctgggg
gggctcatggacccccgccagggcgtcatcgagaggacggggcgctgccagacctgcgcg
ggcaacatgaccgagtgcccgggccacttcggccacatcgagctggccaaacccgtcttc
cacgtgggctttttgggcaaaaccatgaagatcttgcgctgcgtctgcttcttctgctcc
aagctcctggtggactcggcggcggcggcggcgcgtcacccgcaggacgacctgacgcac
aagctggccgacatcgtgaagatcaacaaccagctgcggcgcaacgagcagaacggggcg
gccgcccacgtcatcgccgaggacgtcaagctgctgcagttccacgtggccaccatggtg
gacaacgagctgccggggctgccccgggccatgcagaagtcggggcggccgctgaagtcg
ctgaagcagcggctcaagggcaaggagggccgggtgcgcggcaacctcatgggcaagcgc
gtggacttctcggcccgcaccgtcatcacgcccgaccccaacctctccatcgaccaagtg
ggcgtcccccgctccatcgccgccaacatgaccttcgccgagatcgtcacccccttcaac
atcgaccggctgcaggagctggtgcgccggggcaacagccagtaccccggggccaagtac
atcatccgcgacaacggcgaccgcatcgacctgcgcttccaccccaagcccagcgacctc
cacctccagatcggctacaaggtggagcgccacatgtgcgacggggacatcgtcatcttc
aaccgccagcccacgctgcacaagatgtccatgatgggccaccgggtccgcatcctgccc
tggtccaccttccgcctcaacctcagcgtcaccaccccctacaacgccgacttcgacggc
gacgagatgaacctgcacctgccccagtcgctggagacgcgggccgagatccaggagttg
gccatggtgccccgcatgatcgtcaccccgcagtcgaaccgccccgtcatgggcatcgtg
caggacacgctcaccgccgtccgcaagttcaccaagcgcgacgtcttcctcgagcgcgag
aggattttggaggtgcctatggggtgtccctgggaggggcacctggggggtgctccacgg
agggcaggaggaaccccgaggcaggtgacggggctccaggggcagtttaggagccccggg
ggcagacgttggggtgccgggggagggggacgggggtccggcagccccccgctgacgccc
tccccggcccccgcgcaggtgatcgtggagaacggggagctcatcatgggcatcctgtgc
aagaagtcgctgggcacctcggccggctccctggtgcacatctcctacctggagatgggc
cacgacaccacccgcctcttctacagcaacatccagaccgtcatcaacaactggctcctc
attgagggccacacgattggcatcggggactccatcgccgacgccaagacgtaccaggac
atccagaacaccatcaagaaggccaagcaagatgtcattgaggtcatcgagaaggcgcac
aacaacgagctggagccgacgccggggaacacgctgcggcagaccttcgagaaccaggtg
aaccgcatcctcaacgatgcccgtgacaagaccggctcctctgcccagaagtccctctcc
gagtacaacaacttcaagtccatggtggtgtcgggcgccaaaggctccaagatcaacatc
tcccaggtcatcgcggtggtggggcagcagaacgtggagggcaagcgcatccccttcggc
ttcaagcaccgcacgctgccccacttcatcaaggacgactacggccccgagagccgcggc
ttcgtggagaactcctacctggccgggctcacccccaccgagttcttcttccacgctatg
ggtggccgtgaggggcttatagacacggccgtgaagaccgctgagaccgggtacatccag
cggcgcctgatcaagtccatggagtcggtgatggtgaagtaygacgccaccgtgcgcaac
tccatcaaccaggtggtgcagctgcgctacggcgaggacgggctggcgggcgagagcgtc
gagttccagaacctcgccaccctcaagccctccaacaaggccttcgagaagaagttcaag
ttcgactacaccaacgagcgggcgctgcggcggacgctgcaggaggagatggtcaaggac
atcctgagcaacgcccacatccagaacgagctggagcgcgagttcgagaagatgcgggag
gaccgcgaggtgctgcgcgtcatcttccccaccggcgacagcaaggtggtgctgccctgt
aacctgctgcgcatgatctggaacgcccagaagatctttcacatcaactcgcgcctcccc
tcagacctgcaccccgtcaaggtggtggaaggggtgaaggagctgagccggaagctggtg
atcgtcaacggggacgacccgctgagccggcaggcgcaggagaacgccacgctgctcttc
aacatccacctgcgctccacactctgcagccgccgcatggtggaggagttccgcctcagc
ggcgaggccttcgactggctcctgggcgagatcgagtccaagttcaaccaggccatcgcc
caccctggggagatggtgggtgccctggcagcccagtcgttgggcgagccggccacccag
atgaccctcaacaccttccactacgccggtgtctcggccaagaacgtcaccttgggcgtc
ccccgcctcaaggagctcatcaacatctccaagaagcccaagacgccctcgctcacagtc
ttcctcctgggccagagcgcccgtgacgccgagcgtgccaaggacatcctgtgccgcctg
gagcacacgacgctgcggaaggtgaccgccaacacggccatctactacgaccccaacccg
cagagcacggtggtggccgaggaccaggagtgggtcaacgtctactacgagatgcccgac
ttcgacgtgagccgcatctcgccctggttgctccgcgtcgagctygaccgcaagcacatg
acggaccgcaagctcaccatggagcagattgccgagaagatcaatgctggctttggggac
gacctgaactgcatcttcaacgatgacaacgccgagaagctggtgctgcgaatccgcatc
atgaacagcgatgagaacaagatgcaggaggaggaggaggtggtggacaagatggacgac
gatgtcttcctgcggtgcatcgagtccaacatgctgacggacatgacgctgcagggcatc
gagcagatcagcaaggtgtacatgcacctgccgcagacggacaacaagaagaagatcatc
atcacggaggacggggagttcaaggcgctgcaggagtggatcctggagacggacggcgtc
agcctcatgcgggtgctgagcgagaaggacgtggaccccgtgcgcaccacctccaacgac
atcgtggagatcttcaccgtgctgggcatcgaggcggtgcgcaaggccctcgagcgggag
ctctaccacgtcatctccttcgacggctcctacgtcaactaccggcacctggcgctgctc
tgcgacaccatgacgtcccgcggccacctcatggccatcacccgccacggcgtcaaccgc
caggacaccgggcccctcatgaagtgctccttcgaggagacggtggacgtgctgatggag
gcggcggcgcacggcgagagcgaccccatgaagggggtgtcggagaacatcatgctgggg
cagctggcgcccgccggcaccggctgcttcgacctgctcctcgacgccgagaagtgcaag
cacggcatggagatccccagcaccatcccgggcctcggcgtcggcggccccacgggcatg
ttcttcggctcggcgcccagccccatgggggggatgtcgcccgccatgacgccatggaac
cagggtgccacccccgcctacggggcctggtcccccagcgtgggcagcgggatgaccccc
ggcggggccggcttctcccccagcgccgcctcggacgccagcggcttcagccccggctac
tcgccggcctggtcgcccacgccgggatcgccgggatcaccggggccctccagcccctac
atcccctcgccaggcggcgccatgtcacccagctacagccccacatcgcccgcctacgag
ccccgctcgccggggggctacaccccgcagagccccagctacagccccacctcgcccagc
tacagcccgacatctcccagctacagccccacctcgcccaactacagccccacttctccg
agctacagccccacctctccgagctacagccccacttcgcccagttacagcccgacttct
ccgagctacagccccacttcgcccagctacagccccaccagccccagctacagccccact
tcgcccagttacagccctacatctcccagttacagccccacctcgcccagctacagcccg
acatctccgagctacagcccaaccagcccgagctacagcccgacatctcccagttacagc
ccgacatctcccagttacagtcccacctcacccagttacagcccaacctcgcccagctac
agccccaccagccccaactacagcccaacttcgcccaactacaccccgaccagccccagt
tacagcccgacctcacccagctacagccccaccagtccaaactacacccctacttccccc
aactacagccccaccagccccagctacagccccacttcacccagctacagccccaccagc
cccagttactccccctccagccctcgctacaccccccagtcacccacctacaccccctcc
agccccagctacagtcccagcagccccagctacagccccacctcccccaagtacacccca
accagcccctcctacagccccagctccccggagtacacccccacctcgcccaagtacagc
ccgaccagccccaagtacagccccacctcgcccaagtacagccctacttctcccacctac
agccccaccacccccaagtacagccccacatcacccacctacagccccacctcgcctgtc
tacacccctaccagccccaagtacagccccacgtcacccacctacagccccaccagcccc
aagtacagccccacctcgcccacctacagccccaccagccccaagggctccacttacagc
cccacgtcacccggctacagccccacgtcgcccacctacagcctcaccagcccggccatc
agccccgacgacagcgacgaggacaactga
DBGET
integrated database retrieval system
