Apteryx rowi (Okarito brown kiwi): 112962653
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Entry
112962653 CDS
T07573
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112962653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112962653
03036 Chromosome and associated proteins [BR:
arow03036
]
112962653
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112962653
Coactivators
SAGA/TFTC/STAGA complex
112962653
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112962653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
DUF1955
Motif
Other DBs
NCBI-GeneID:
112962653
NCBI-ProteinID:
XP_025914814
Ensembl:
ENSARWG00000015358
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MVLVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPTSISPRLSVPTSGPVFRLSTTQQPT
SVAATTVRLGLPVQAKVVQSTATPVSATSAATLPGGSILSHTTVSVASTSAQSLFKTTVA
TGTSASQQPTVIAGGQTQASAQTQGQPRLPLPPHTTAQVPAQPQVIPSSPVPGTTVVSQE
MQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTGRLQSELKSS
PQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQSLQQTKLSQVIPQSASGSISTVVTT
QTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVKRNPACQTTQIRM
PVVITQTIRPPGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVAS
MAGVNLSEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILEMAKKLGITDVPAEVV
TFISHATQNRLRTVIEKVTVITQHRMESHKDDEWYEQATDVRSQLKFFEQLERLEKQRKD
EQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRK
LDSPGLLTIGGEGLSMSGGSQAGLGTPSSRQYARQKITRVNLRDFIFYMEQERETSHSLL
LYRALLK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggtgcgcacagatgctggacagcttgtcatggtccctcagcaggctctagcg
caggctcaaatgcaggctcaagtacaaacgcagggacagggtcctaccagcatttcaccc
agactttcagttcccacaagtggcccagtgtttcgcctatcaacaactcagcaaccaact
tctgtagctgcaactactgtccgcctaggacttccagtgcaagccaaagttgttcaatca
actgctacaccagttagtgctacttctgccgcgactctaccaggtggctctattctttca
cataccacagtatcagtagcttcaacaagtgctcaaagtttattcaagacaacagtagca
actggaacatcagcttctcaacaacccacagtaattgctggtggacaaactcaagcttca
gcacaaacccagggtcaacctcggctgccgcttccacctcatacaacagcacaagtacca
gcacagccccaggtcataccaagctctcctgtacccggaactacagtggtatcgcaggaa
atgcaagagaatgtgaaaaaatgcaaaaactttttagctacccttataaaacttgcttct
cataattcaccttctccagaaacatcccgtaatgtgaaagctctggttcaggatttgttg
gatgcaaagattgatccagaagaatttacaggccgccttcaatcagagctcaaatcatct
cctcagccatatcttgtacctttccttaagaaaagtctacctgcattgagacaatcttta
ctgaatagtcaacattcagttttgcaaggacagccgtctcagcagtcacttcaacaaacc
aagctatcacaagttatacctcaatctgcctctggaagcatttccactgttgtcacaacg
cagacaataggaataaggcaaccaaacaacatttgcacggtctctgtatcaaatacagtg
cagcctcctcaggttaaggtggtacagtcaaatcagagttctcaactgcagattatccag
tcaacatctgctcaaactgtgaaacgaaaccctgcttgccagactacccagattaggatg
ccagtggtaataactcagaccattagaccaccaggcacagtagggaaggcaccaacaata
caagccagcaaaagtcctgggggcttcggtgttcaggtctctgcaaatcagaaaaacaag
ctgaatgatcctggaggtggttctttcagagatgatgatgacatcaatgatgttgcctct
atggctggtgttaatctaagtgaagaaagtgcccgaattatggctaccaactctgacttg
gttggaacccagatacagtcctgtaaagatgaaccctttcttgctgctatacctctacat
aagcgcatacttgaaatggctaaaaaattaggaattactgatgtgccagctgaggtggtt
acttttatttcccatgcaacacaaaacagattaagaacagtgatagaaaaagtaacagtg
ataacccagcaccgtatggaatcacacaaagatgatgaatggtatgaacaagctacagat
gtccgatcacagctaaagttttttgaacagttggaacgtttagaaaagcaaaggaaagat
gaacaagagagggaaatcttgctaaaggctgccaagagtcgctcaaggcaagaagaccca
gagcaagctagactgaaacaaaaagcaaaggagatgcagcaacaagaacttgcacaaatg
aggcagagggatgccaatctaactgcactggcagctattggtccccggaagaagcggaag
cttgattcgcctggactgcttaccataggaggagagggcctcagtatgtctggtggaagt
caggctggcttggggactccttcatcccggcagtatgcacgacagaaaataactcgcgta
aacctcagggacttcatcttctacatggaacaggaaagagaaacgagccattctctcctg
ctctatcgagctctgcttaaataa
DBGET
integrated database retrieval system
