Apteryx rowi (Okarito brown kiwi): 112963286
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Entry
112963286 CDS
T07573
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03008
Ribosome biogenesis in eukaryotes
arow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112963286 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
112963286 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112963286 (XRN2)
03019 Messenger RNA biogenesis [BR:
arow03019
]
112963286 (XRN2)
03009 Ribosome biogenesis [BR:
arow03009
]
112963286 (XRN2)
03016 Transfer RNA biogenesis [BR:
arow03016
]
112963286 (XRN2)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112963286 (XRN2)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
112963286 (XRN2)
Ribosome biogenesis [BR:
arow03009
]
Eukaryotic type
Pre-60S particles
RNases
112963286 (XRN2)
Transfer RNA biogenesis [BR:
arow03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
112963286 (XRN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
DUF8363
Motif
Other DBs
NCBI-GeneID:
112963286
NCBI-ProteinID:
XP_025915986
Ensembl:
ENSARWG00000005743
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MSRSSEKLYAQPGAQTFEAFAQKNSAKECNGVKASIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCSLCNQMGHEVKDCQGLPREKQGKHDQFADSLPTSEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKHDHPSFIPGGQFSPQALGNRSSPQAISNPRQTAFEMRMHDRQNSTTSSPNTSLT
SDGTPSPAGGIKRKAEDSDSEPEPEDNIRLWEAGWKQRYYKNKFDVDASDEKFRRKVVQS
YVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFDGIADMPSDFEKGSKPFKPLEQLMGV
FPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAA
LEEVYPDLTPEENRRNSLGGDVLFVGKHHPLCDFIVELYKSKSEEPVDIPPELCHGIQGK
LTLNENAVLPDQTVESPVPMLRDLTQNSAVSISFKDPQFDEDFVFKATVLPGAKKPPPVL
KPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHSIPRERGMPGMYANAVPLGA
YGNPYSRPLLSGQQQIPKLLSKAPGLLLFSPGTACCHPKVSTSRVSTKD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaagctccgagaagctctacgcccagccaggagcccagacctttgaggcattt
gcgcagaaaaacagtgctaargagtgcaatggtgtcaaggcttcaattgataccagcaaa
cctaatcctaatgaggtggagtttgataatctgtatttggatatgaatggtataatccac
ccttgtacccatccggaagacaagccggcacccaaaaatgaagatgaaatgatggttgcg
atttttgagtatattgacaggatcttcaacattgtaagaccaaggcggcttctctacatg
gctatagatggagtagctccacgtgcaaaaatgaatcagcaacgatcaagaagattcaga
gcatcaaaggagggaatggaagctgcggaagagaagcaaaaaataagacaagagattcta
gcaaaaggtggcattcttcctccagaagaagtgaaagagagatttgacagcaactgtatt
accccaggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttaaacagtgacccaggttggaaaaatttgacagttattttgtctgatgctagtgct
cctggcgaaggtgaacataaaatcatggattatattagaagacaaagagctcaaccaaac
catgacccaaacactcatcactgtctgtgtggggctgatgctgatctaattatgctcgga
ttagctacacatgaaccaaatttcactataattagggaagagtttaaaccaaataaaccc
aagccatgtagtctttgtaaccagatgggtcatgaagttaaggattgccaaggcttgccc
agagaaaaacaaggcaagcatgatcagtttgcagacagtcttcctacctctgaacaagaa
tttatcttcattcgattatgtgttttgcgagagtatttggaaagagaactcactatggcc
agtttgcctttcacttttgattttgaaagaagcgttgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccgtctttggagatcagggaaggagcaatt
gatcgcttggttaacatatataaaaatgtggtgcacaaaactgggggatacctcacagaa
agtggttttgtcaacctacagcgagtccagatgatcatgttagctgttggagaagtcgaa
gatagtattttcaaaaagagaaaagatgacgatgacaacttcaaaagacggcaaaaagaa
aaaagaaaaagaatgaagcatgatcatccttcttttattcctggtggacagttttcccct
caagctctgggaaatcgatccagtcctcaggcaatcagcaaccctcgacagactgccttt
gaaatgagaatgcacgaccggcagaattctacaacttcatctccaaacaccagtctcact
tctgatggcaccccgtccccggcaggaggaattaagcgaaaagctgaagacagcgacagt
gaacctgagccagaggataatatcaggttatgggaagctggttggaaacaacgctattat
aaaaataaatttgatgttgatgcatctgatgagaaattccggcgtaaagttgtgcagtcc
tatgtcgaagggctttgctgggttctcagatactattaccagggctgtgcatcctggaac
tggtattacccttttcactacgctccgtttgcttctgactttgatggcattgcagacatg
ccctcagattttgagaagggctcaaaaccgttcaagcctcttgaacaacttatgggagta
tttccagctgcaagtggaaattttctgccaccaacctggaggaagctcatgacagatcca
gaatcaagcataattgacttctaccctgaagactttgctattgatttaaatgggaagaaa
tatgcttggcaaggtgttgccttgttgccatttgttgatgagcgacgtcttagagctgcc
ctggaagaagtctatcctgacctcactcctgaagaaaatagaagaaatagccttggtggt
gatgttctctttgttgggaagcatcatccactttgtgattttattgtggaactgtacaag
tccaaaagtgaagagccagtggatataccaccagaactgtgccatggaatccagggaaaa
cttacactgaatgaaaatgcagttcttccagatcagacagtggagtctcctgttccaatg
ttacgcgatcttacacaaaattctgcagtcagtatctctttcaaagatccacaatttgac
gaagactttgttttcaaggctacagtgttacctggtgcaaagaaacctcctccagtcctt
aagccaggagactgggaaaaaaccaacaacgatggtaggccttggaggccacagcttggt
tttaatcgagacaggaagccggtccatttggaccagtcggcgtttagaactttagggcat
tcaataccaagggaaagagggatgccaggaatgtatgccaatgcagtaccacttggagct
tacgggaacccatacagcaggccgcttctaagtgggcagcagcagattcctaaattgttg
tcaaaagcgccggggctgctcctcttctcgcctggaaccgcatgctgccatcccaaagtc
agtaccagccgggtcagtaccaaggactag
DBGET
integrated database retrieval system