KEGG   Apteryx rowi (Okarito brown kiwi): 112963286
Entry
112963286         CDS       T07573                                 
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow03008  Ribosome biogenesis in eukaryotes
arow03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:arow00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112963286 (XRN2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112963286 (XRN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arow03021]
    112963286 (XRN2)
   03019 Messenger RNA biogenesis [BR:arow03019]
    112963286 (XRN2)
   03009 Ribosome biogenesis [BR:arow03009]
    112963286 (XRN2)
   03016 Transfer RNA biogenesis [BR:arow03016]
    112963286 (XRN2)
Transcription machinery [BR:arow03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     112963286 (XRN2)
Messenger RNA biogenesis [BR:arow03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     112963286 (XRN2)
Ribosome biogenesis [BR:arow03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112963286 (XRN2)
Transfer RNA biogenesis [BR:arow03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    112963286 (XRN2)
SSDB
Motif
Pfam: XRN_M XRN_N DUF8363
Other DBs
NCBI-GeneID: 112963286
NCBI-ProteinID: XP_025915986
Ensembl: ENSARWG00000005743
LinkDB
Position
Unknown
AA seq 889 aa
MSRSSEKLYAQPGAQTFEAFAQKNSAKECNGVKASIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCSLCNQMGHEVKDCQGLPREKQGKHDQFADSLPTSEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKHDHPSFIPGGQFSPQALGNRSSPQAISNPRQTAFEMRMHDRQNSTTSSPNTSLT
SDGTPSPAGGIKRKAEDSDSEPEPEDNIRLWEAGWKQRYYKNKFDVDASDEKFRRKVVQS
YVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFDGIADMPSDFEKGSKPFKPLEQLMGV
FPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAA
LEEVYPDLTPEENRRNSLGGDVLFVGKHHPLCDFIVELYKSKSEEPVDIPPELCHGIQGK
LTLNENAVLPDQTVESPVPMLRDLTQNSAVSISFKDPQFDEDFVFKATVLPGAKKPPPVL
KPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHSIPRERGMPGMYANAVPLGA
YGNPYSRPLLSGQQQIPKLLSKAPGLLLFSPGTACCHPKVSTSRVSTKD
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgtcgagaagctccgagaagctctacgcccagccaggagcccagacctttgaggcattt
gcgcagaaaaacagtgctaargagtgcaatggtgtcaaggcttcaattgataccagcaaa
cctaatcctaatgaggtggagtttgataatctgtatttggatatgaatggtataatccac
ccttgtacccatccggaagacaagccggcacccaaaaatgaagatgaaatgatggttgcg
atttttgagtatattgacaggatcttcaacattgtaagaccaaggcggcttctctacatg
gctatagatggagtagctccacgtgcaaaaatgaatcagcaacgatcaagaagattcaga
gcatcaaaggagggaatggaagctgcggaagagaagcaaaaaataagacaagagattcta
gcaaaaggtggcattcttcctccagaagaagtgaaagagagatttgacagcaactgtatt
accccaggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttaaacagtgacccaggttggaaaaatttgacagttattttgtctgatgctagtgct
cctggcgaaggtgaacataaaatcatggattatattagaagacaaagagctcaaccaaac
catgacccaaacactcatcactgtctgtgtggggctgatgctgatctaattatgctcgga
ttagctacacatgaaccaaatttcactataattagggaagagtttaaaccaaataaaccc
aagccatgtagtctttgtaaccagatgggtcatgaagttaaggattgccaaggcttgccc
agagaaaaacaaggcaagcatgatcagtttgcagacagtcttcctacctctgaacaagaa
tttatcttcattcgattatgtgttttgcgagagtatttggaaagagaactcactatggcc
agtttgcctttcacttttgattttgaaagaagcgttgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccgtctttggagatcagggaaggagcaatt
gatcgcttggttaacatatataaaaatgtggtgcacaaaactgggggatacctcacagaa
agtggttttgtcaacctacagcgagtccagatgatcatgttagctgttggagaagtcgaa
gatagtattttcaaaaagagaaaagatgacgatgacaacttcaaaagacggcaaaaagaa
aaaagaaaaagaatgaagcatgatcatccttcttttattcctggtggacagttttcccct
caagctctgggaaatcgatccagtcctcaggcaatcagcaaccctcgacagactgccttt
gaaatgagaatgcacgaccggcagaattctacaacttcatctccaaacaccagtctcact
tctgatggcaccccgtccccggcaggaggaattaagcgaaaagctgaagacagcgacagt
gaacctgagccagaggataatatcaggttatgggaagctggttggaaacaacgctattat
aaaaataaatttgatgttgatgcatctgatgagaaattccggcgtaaagttgtgcagtcc
tatgtcgaagggctttgctgggttctcagatactattaccagggctgtgcatcctggaac
tggtattacccttttcactacgctccgtttgcttctgactttgatggcattgcagacatg
ccctcagattttgagaagggctcaaaaccgttcaagcctcttgaacaacttatgggagta
tttccagctgcaagtggaaattttctgccaccaacctggaggaagctcatgacagatcca
gaatcaagcataattgacttctaccctgaagactttgctattgatttaaatgggaagaaa
tatgcttggcaaggtgttgccttgttgccatttgttgatgagcgacgtcttagagctgcc
ctggaagaagtctatcctgacctcactcctgaagaaaatagaagaaatagccttggtggt
gatgttctctttgttgggaagcatcatccactttgtgattttattgtggaactgtacaag
tccaaaagtgaagagccagtggatataccaccagaactgtgccatggaatccagggaaaa
cttacactgaatgaaaatgcagttcttccagatcagacagtggagtctcctgttccaatg
ttacgcgatcttacacaaaattctgcagtcagtatctctttcaaagatccacaatttgac
gaagactttgttttcaaggctacagtgttacctggtgcaaagaaacctcctccagtcctt
aagccaggagactgggaaaaaaccaacaacgatggtaggccttggaggccacagcttggt
tttaatcgagacaggaagccggtccatttggaccagtcggcgtttagaactttagggcat
tcaataccaagggaaagagggatgccaggaatgtatgccaatgcagtaccacttggagct
tacgggaacccatacagcaggccgcttctaagtgggcagcagcagattcctaaattgttg
tcaaaagcgccggggctgctcctcttctcgcctggaaccgcatgctgccatcccaaagtc
agtaccagccgggtcagtaccaaggactag

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