Apteryx rowi (Okarito brown kiwi): 112963756
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Entry
112963756 CDS
T07573
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow00100
Steroid biosynthesis
arow01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
112963756 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
arow01006
]
112963756 (FDFT1)
Enzymes [BR:
arow01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
112963756 (FDFT1)
Prenyltransferases [BR:
arow01006
]
Terpene biosynthesis
Squalene/phytoene synthase
112963756 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
112963756
NCBI-ProteinID:
XP_025916887
Ensembl:
ENSARWG00000001720
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MAGPPRGHLPPAAVQDGRLPRRDAAARPVLRALDTVEDDMTISLDIKVPMLHEFHSYLYQ
PEWKYMESKEKDRQVLEDFPTISSEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQH
EWDKYCHYVAGLVGIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLE
GREFWPREVWSRYAKKLSDLAKPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVF
NFCAIPQVMAIATLAACYNNKQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIY
QKIPSTDPSSNKTQQIIASIRAMSLPSGPMASRHHYSPIYLSCAMLLAALSWQYLSTVSK
AAEEYVQTGEN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggctgggccaccccgaggacatctaccacctgctgcggttcaagatgggcggctaccg
cgccgtgatgccgcggctcgacccgttctccgtgccctggacaccgtagaggacgacatg
accatcagcttggacataaaggtcccaatgctgcacgagttccactcctatctctatcaa
ccagagtggaaatacatggagagcaaggagaaggaccggcaggtgcttgaggacttccca
acgatttcctcagagtttcggaacctggcaaaggtgtatcaggatgtgatttcagatatt
tgtcacaagatgggagtcgggatggcagagttcttggagaagaaggtggactctcagcat
gartgggataagtattgtcactacgttgctgggctggtgggaataggcctctcccgtctc
ttctctgcatcagagctagaagatcctatcgttggacaagacacagagctggcaaattcc
atgggccttttcctgcagaaaaccaacatcattcgtgactatttagaggatcagctggag
ggaagggaattctggcccagagaggtttggagcagatatgccaagaagctctcggatctt
gccaaaccagagaacattgatatggctgtccagtgtctgaatgagctgatcaccaacgct
ctccaccatgtccctgatgttctcacgtacttatctcgcctgaaaaaccaaagtgtcttc
aacttctgtgctatccctcaagtgatggctattgccactctggctgcctgctataacaac
aagcaggtgttcaggggtgtagtgaagatccgaaagggacaagctgtcactctaatgatg
gatgccacaaacatacaggctgtcaaagccatcatgtatcagtatgtggaagagatctac
cagaagataccgagcacggacccttcgtccaacaagacgcagcagatcatcgcctccatc
cgcgccatgagcttgcccagcggccccatggcgtcgcgtcaccactactcccccatctac
ttgtcgtgcgccatgctcctggcagctctcagctggcagtacctgagcaccgtgtcgaag
gctgccgaggagtacgtccagacgggcgagaactga
DBGET
integrated database retrieval system