Apteryx rowi (Okarito brown kiwi): 112964129
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Entry
112964129 CDS
T07573
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
112964129 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arow01001
]
112964129 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
arow04054
]
112964129 (CIITA)
Enzymes [BR:
arow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112964129 (CIITA)
Protein kinases [BR:
arow01001
]
Serine/threonine kinases: Other
TAF1 family
112964129 (CIITA)
Pattern recognition receptors [BR:
arow04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112964129 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_9
LRR_14
NB-ARC
nSTAND_NTPase5
AAA
Motif
Other DBs
NCBI-GeneID:
112964129
NCBI-ProteinID:
XP_025917609
Ensembl:
ENSARWG00000000168
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MNLFKEILPRVRNILSSATASDDHALLNLMLKEDVISKEYHQTLLHEKDREDLARKISLT
FVEKRDLYLNALIPLCCLKLYGSKPQNITDNEPRGSKYISDSKRQIMDSAFVSENGYLDL
LHSDIDPLHLYTLFDPTSSGNEESDFSADPEIDTSNYDQFNNMDFLCAMENDENGDESYL
CSNTREAYARIAELAEYVLKDQQEKQVEDTFAGNLILDEMAAENTEKFTDTKVQKCHKRT
FLGSAESCSGVSEPKYKKIGSSAHLIPEYLPVSAKGSQQNTDFAAPPQQIINFLIENGTS
NVIIYPVLTSSTETLIPSSFPVSLCGLQVFKEVQVPIVPSEEPFKRPRPVEAFCTSLMDY
FQDTCKFVAMEREVTLDHLFIDGTLVQGQIESKSGKNSVKVMEKELVTCNLQAKEKAALE
RSQIFQIPGGKELETKVIVVLGKAGMGKSIHVQKICQDWSGGEFSLFEFVFWFECKQINM
PEKRYSLKDLLLEFFVKPQEGSNEVFEYILQNPSKVLLVFDGFEGLHDNENFPRCSDSKP
DKEVYSIKELLSGLIQKKILNGCTLLLTARSKDKVSQYVSKVDKTVEIVGFSPQQRELYI
TKYFEGLSYCDKALKLIKDCQYLFSHCYSPVMCRFVCFLCETVLEMGDKDLPSTLTTLFL
KFVQQKLTPMQRDVSPMQNQQNLAMLACIAWYLGEKHQSAMRSDLLPSKEVKEFALKYGF
VLPFAFPKHSDTGEEEFRSTFSNFAIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPY
NWLDLVPRFLAGLLFLQDDPDFCSLLNKDVKQSTKKQKTLLKYIKRLQINDLCPERLLEL
FHCIYETQNNYLLEHVALRLKPELSFLGVVLTPPDVHVLYSILKRSRKEFSLDLQNSSID
MQGLKDLVGLKNVASFRASLRDIIRLWKSLEQTKEYELLRMSTEKFILDPFKAKTMKDIS
DLSDLVEVQKKMISCVQDVSGWNSYEIPAIKNLRKLEFALGQVCGLQGFLKFVGILAAFP
SLQHLDLEALSENNIGDEGAKSLSEVFPKLTSLETLNLSQNKITDVGAEKLAKALPFLSS
LKTLSLYNNSICDFGAENLAKILPAMASLRVLDVQYNKITDVGAQQLTDSLRKCPHIKNL
LMWNPTIPYGVLEHLHQLDSRISL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttaaggagatcctgcctagagtaaggaatattctctcaagtgctacagct
tctgatgatcatgcattgcttaacctcatgctgaaagaagatgtgatatccaaggagtac
catcaaaccttgctccatgaaaaagacagagaggaccttgcaaggaagatatctctgaca
tttgtggaaaaacgggacctgtatttgaacgctttgattcccctctgttgtttaaaactg
tatggcagtaagcctcaaaacatcacagataatgagccaagaggaagcaagtacatttct
gacagcaagagacaaatcatggattcagcatttgtgtctgaaaatggctatcttgatctg
ctgcacagtgatatcgatccattgcatctgtatactctctttgaccctacatcatctgga
aatgaagaaagtgacttctcagcagatcctgaaattgataccagcaactacgatcagttc
aataacatggatttcctttgtgcaatggaaaatgatgaaaatggggatgaatcgtatctc
tgttccaacacaagggaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaggtggaagacacttttgcagggaaccttattttggatgaaatg
gctgctgaaaacactgagaaatttactgacacgaaggtgcagaaatgtcacaaacgaacc
ttcttaggctctgcagagagttgctctggtgtttcagaacccaaatacaagaaaattggg
tcttcagcacatttgattccagagtatctgcctgtcagtgcgaaagggagccaacaaaat
acagattttgcagctcctcctcagcagataattaattttcttattgaaaatggcacatca
aatgttataatatatccagtgctgacttcttccactgaaacattgatcccctcaagtttt
ccagttagtttatgtggtttacaagtgttcaaagaagtgcaagttcctatagttccttct
gaagaacctttcaagagaccaaggccagtggaagctttttgtacgtcacttatggattat
ttccaagacacgtgcaaatttgtggccatggagcgtgaagtaactcttgaccatctgttt
attgatggcactcttgttcaaggccaaattgaatccaagagtgggaagaatagtgtaaaa
gtaatggaaaaagagctggtgacttgtaatctgcaagcaaaggaaaaggcagcccttgaa
agaagccaaatatttcaaatcccaggaggtaaagaattagagactaaagtgattgtggtg
ctaggaaaagcaggaatgggaaaaagcattcatgttcagaagatctgccaggactggtcc
ggtggagagttttctctgtttgaatttgtcttttggtttgagtgcaaacaaataaacatg
cctgagaagcgatacagcttgaaggatctgcttcttgagttttttgtaaaacctcaagag
ggaagcaatgaggtctttgaatacatactacaaaatccctctaaagtcctgctggttttt
gatggctttgaagggctgcatgataatgagaattttcctcgttgctcagacagcaagcct
gacaaagaggtgtacagtataaaggagctactttcaggcctcatccaaaaaaagatactg
aacggttgtactttactacttacagcaagatctaaagacaaggtgagccaatatgtgtcc
aaagtggataagactgttgaaatagtaggattctcccctcagcagagagaattatacata
accaaatattttgaaggattatcctactgtgataaggcactgaaattaatcaaagattgt
cagtacctgttcagtcattgttacagccctgttatgtgtagatttgtttgttttctctgc
gagacagtacttgaaatgggagacaaagaccttccttcgactcttactacactcttcctg
aaatttgttcagcaaaagctaacacctatgcaaagagatgtttcgcccatgcaaaatcaa
cagaatcttgctatgctagcctgtatagcctggtatctaggagaaaagcaccaaagtgcc
atgagaagtgatcttctcccttctaaggaagttaaagaatttgctctgaaatatggattt
gtcctgccatttgcattccccaaacattcagatactggagaagaagaattcaggagcaca
ttctccaattttgccattcagaatttcttgggtgcacttcaccttatgttagcagaagag
atcaaggataaaagcctaacaaagtacctgtcttttccatccaagaagaaaaaaccttat
aactggttagacttagtgcctcgatttttggctggattgttgttcctccaggatgacccc
gacttctgctcccttttgaacaaggatgtaaaacaatcaaccaaaaagcagaaaacactc
ttaaaatatattaaaaggctgcagataaatgacctctgtccagagaggttactggagctt
tttcattgtatttatgaaacacaaaacaactatcttttggaacacgtggccctaagactc
aagccagagctgtcttttctgggtgttgttcttacaccacctgatgtccacgtgctgtac
tctattttaaaaaggtcaagaaaagagttttcgttggatttgcaaaacagcagcattgac
atgcaagggctaaaagacttggttggcctaaagaatgtggcatcattcagggcttccctc
agagatataatcaggctctggaagtctttagaacagacaaaagagtatgaactgctgaga
atgtcaacagagaaatttattcttgatccctttaaggcaaagacgatgaaggacatcagt
gacctttctgaccttgtagaggtgcagaagaagatgatcagttgtgtgcaagatgtatct
ggttggaacagctatgaaattcctgccatcaaaaacctcagaaaactagaatttgcgctg
ggtcaggtgtgtggccttcagggattcctaaaatttgtgggaattcttgcagcatttcca
tcacttcagcatttagaccttgaagctctgagtgaaaataacataggagatgaaggagca
aagagtctatctgaggtctttccgaagctgacatcactggaaacattaaacttatcacag
aataagataacagatgtgggtgcagagaaactagctaaagctcttcctttcttgtcttca
ctgaagacccttagcttgtacaataatagcatttgtgattttggagcagaaaatcttgca
aaaattcttcctgcaatggcatctttgagggtgttagatgttcagtataataaaataact
gacgttggagcccaacagctgactgacagcctaagaaaatgtccccatatcaagaatttg
ctgatgtggaatcctaccattccctatggagttcttgaacaccttcatcagttggattct
agaattagtttgtag
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integrated database retrieval system
