Apteryx rowi (Okarito brown kiwi): 112964137
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Entry
112964137 CDS
T07573
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03420
Nucleotide excision repair
arow03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112964137 (ERCC4)
03460 Fanconi anemia pathway
112964137 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arow03032
]
112964137 (ERCC4)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112964137 (ERCC4)
DNA replication proteins [BR:
arow03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112964137 (ERCC4)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
112964137 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
112964137
NCBI-ProteinID:
XP_025917646
Ensembl:
ENSARWG00000010015
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MAALLEHESQIFLDLFHRDGLVVCARGLGIDRLLLRFLRLYSEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEVTNNIRYEFYTQGGVLFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMRNLFVRKLY
LWPRFHIAVNSFLEKHKPEVVEIHVSMTPGMLAIQTSILDILNACLRELKRYNPALEVED
LSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADDRLNKKSKVSENNDVKKENELKR
ELVLESNPKWEALREVLKEIENENKNSEDLGGPGQVLICASDDRACAQLKEYITVGAEAF
LMRLYNKTFGKDEKAGEVWSKDRKAVKSKGSTRPDTGTQAQKAKLKASSKENKHKKQQDR
TLTQMIGKTEEENREEELEVEEYKELSSSQESSIEETVPEDFHINLPSDSYYGIFKTPLT
IIHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGG
STEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNLDLVRDATPASVSTDTRKA
GGQEQKSAQQTVIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDL
IGSLNNGRLYTQCISMSRYYKRPILLIEFDPNKSFSLIPRGCLHQEISSNDVTSKLTLLT
LHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEVLPESDKYNPGPQDFL
LKMPGVNTKNCRVLMNHVKSIAELVTLSKDKLSKILGNAINATQLFDFIHLTYSEAISQG
KNKR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggacctcttccaccgcgacggg
ctggtggtgtgcgcccgcgggctgggcatcgaccgcttgctgctgcgcttcctccgcctc
tacagcgagcccgccagcctggtgctggtgctcaacacgagccccgccgaggaggaatat
tttattgatcagctgaggtcagatggagttgttcatcttcctcggcgtgttaccaatgaa
gttacaaataatattcgttatgaattttacacacaaggaggtgtcctctttgcaacaagt
cgaatcctcgtggtcgatttcctcaccgacagaattcctgcaaacctcattactggcatt
ttggtatacaaagcgcacagaatcattgagtcttgtcaggaagcatttatcttgcgactt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcgttt
aacactggcttttgccatgtggaaagagtgatgaggaatctttttgtcaggaaactttat
ctgtggccaagatttcatatagctgtgaactcatttttagagaagcataaacctgaagtg
gtagaaatacatgtgtcgatgactcctggtatgcttgctatccagacctccatattggac
attttgaatgcatgtctgagagaactcaaacgttataatccagctcttgaagtagaagat
ctatctttagaaaatgctattggtaaaccttttgacaagacaatacgtcactatttagat
cctctctggcatcaacttggagctaagaccaaatctttagtccaggatttgaagatacta
cgtactttgctacaatatctaactcagtatgattgtgtcaccttccttaatcttttggag
tcactgaaagcaagcgaaaaagcttttggtgagaattcaggttggctgtttcttgattct
agtacttcaatgtttgtaaatgctcgagccagagtttatcgcattgcagatgacagactg
aataaaaaaagcaaagtttctgaaaacaatgatgtaaagaaggaaaatgaactgaaaagg
gaattggttctagaaagtaacccgaaatgggaagctttacgggaagtattgaaagaaatt
gaaaatgagaataagaacagtgaagatcttggtggtccaggacaagtacttatttgtgcc
agtgatgaccgagcttgtgcacagctcaaggaatatattactgttggagcagaagctttt
ttaatgagattgtataacaaaacctttggaaaggatgagaaggctggcgaagtgtggagt
aaggatagaaaagctgtcaagtccaaaggaagcaccagaccagacacaggaactcaagcc
caaaaggccaaactcaaggcttcttcaaaagaaaataaacacaagaagcagcaagaccgg
actttaacccaaatgatagggaaaactgaggaggaaaacagagaggaggagttggaggtg
gaagagtacaaagaattaagcagtagccaagaaagcagtattgaagagactgttcctgaa
gatttccatattaacttgccctcagattcttactatggtatcttcaaaacacctctcacg
attattcatcccttacagggttgcagtgatccctatgcactcactcgggtattgcatgaa
gtagaaccaagatatgttgtattatatgatgcagaactaacttttgttcggcagctggaa
atctacaaggcaagcaggcctggaaagcctttgagggtttatttcctcatatatgggggc
tcaacagaagaacagcgctatctcacagctctgagaaaggaaaaggaggcctttgagaaa
ctcattcgagagaaggccagcatggtaattcctgaagagagagaaggaagagatgaaaca
aacttggacctagtaagagatgccactcctgcatctgtttccactgacacacgcaaagca
ggtggacaagaacagaagagtgctcagcaaactgtaatagtggatatgcgggaatttcgt
agtgagcttccatcacttattcatcgtcgtggcattgacattgagcctgttactttggaa
gttggagattacattttaactcctgatatctgtgtagagcggaaaagtatcagtgatctt
attggttccctaaataatggaagactgtacacacagtgcatttctatgtcccgttactat
aagcgaccaattctcctgattgaatttgatcctaacaaatctttctccttgattccacga
ggctgtctacatcaggagatttccagtaatgatgttacttctaaactaacccttcttaca
ctccatttccctaagttacgtatcctgtggtgtccctctcctcatgctactgctgaactg
tttgaagaattgaaacaaaaccatccacaacctgatgcagaaacagcaatggctgtcaca
gcagattctgaagttcttcctgagtcagacaagtataaccctggtccccaggactttcta
ttaaaaatgccaggtgttaacacaaaaaactgccgtgtcttaatgaaccatgttaaaagc
attgcagagctagtaacactgtcaaaggacaaactttccaaaattttgggtaatgccatc
aatgccacacaactctttgacttcattcacctgacctacagcgaggcaatatctcaagga
aaaaacaaaagatga
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