Apteryx rowi (Okarito brown kiwi): 112964206
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Entry
112964206 CDS
T07573
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112964206 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112964206 (DIS3)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
112964206 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
ASPRs
Toxin_R_bind_C
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
112964206
NCBI-ProteinID:
XP_025917756
Ensembl:
ENSARWG00000006925
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MLTSRTFLKRTRAGAVVKVVREHYLRDDIPCGAAACXXXXXXXXXXXXGPHYLLPDTNLL
LHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRVRDMIANPEKHFYSFTNEHHRETYI
EQEQGENSNDRNDRAIRVAVKWYNEHLKKMKNEENIQVIFLTNDRNNKEKALEEGITAYT
CEEYIKSLMANPDLVDRLACISDEGKEIESGKIFFPEHLPLSKLQQGIKSGIYLQGTYRA
SRDNYLEATVWVHGDAEENKEIIIQGLKHLNRAVHEDIVAVELLAKDEWVAPSSVVLQDD
SQNEDDIENEEEKENILKASVNKNMLRPTGKVVGIIKRNWRPFCGMLSKSQIKEARRHLF
TPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNGHFVKNLGNAGDKETETEVL
LLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKYREDLRQLCVCSVDPPGCTDIDDALHCR
ELENGNLEVGVHIADVSHFIRPGNALDEESAKRGTTVYLCEKRIDMVPELLSSNLCSLRS
NVDRLAFSCIWEMNHKAEILKTRFTKSVINSKASLTYAEAQMRIDSAGMNDDVTTSLRGL
NKLAKILKKKRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMVEEFMLLANIS
VAQKIYDEFSEFALLRKHPAPPPSNYDILVKAAKSKNLEIKTDSAKALAESLDKAESPAF
PYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAV
AIGADSTYPELTDKHKLADLCKNLNYRHKMAQYAQRASVAFHTQLFFKTKGEVNEDAYIL
FVRKNAIVVLIPKYGLEGTVFFEEKDKTKPRLDYNSEVPSLTVEDTTFRIFDKVKVNIML
DASNIQHQKIRMVLVEPKIPGKDVPANPTTEASVSNEPEKKKKKLQK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcctgaagcgcacgcgggcgggcgccgtggtgaaggtggtg
cgcgagcactacctgcgcgatgacatcccctgcggcgccgccgcctgccnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnggcccgcactacctcctgccggacaccaacctcctc
ctccaccagattgatatacttgaagatcctgttattaaaaatgtcattgtgctacagacg
gttttacaagaagtcaggaatcggagtgcaccagtatacaagcgagttagagacatgatt
gcaaacccygaaaaacatttctattccttcaccaatgaacatcatcgagaaacatacata
gagcaagagcaaggagaaaattctaatgaccgcaatgacagagccattcgggtagcagta
aaatggtacaatgagcacttgaagaaaatgaaaaatgaggagaacatccaagttatcttt
ctaacaaatgacaggaataataaagagaaagctctggaggaagggataactgcttataca
tgtgaggagtatataaaaagcttgatggctaatcctgatcttgtagatcgtcttgcttgt
atatctgatgaagggaaagaaatagagagtggaaaaatattttttccggaacatcttcct
cttagcaaattacagcaaggaataaaatctggtatttacctccaaggaacctatagggca
agcagagataattatcttgaagctactgtttgggttcatggagatgctgaagaaaacaaa
gagataattatacaaggacttaaacatttaaatcgagcagttcatgaagatattgtagct
gtggagttgttggcaaaagatgaatgggtagcaccatcctcagttgtcctgcaagatgac
agccagaatgaagatgacattgaaaatgaagaggagaaagaaaacattctgaaggcttct
gttaacaaaaacatgctgagacctacaggaaaagtagtgggcattataaagcgaaactgg
agaccattttgtggcatgctttctaaatcacagatcaaagaggcaaggcggcatttgttt
acaccagctgatcgcagaattcctcgcattcgaatagaaactagacaagcagatacattg
gaaggacaaagaataattgttgctattgatggttggcccaggaattccaggtatcctaat
ggtcattttgtaaagaacttaggaaatgcaggagataaagagactgagacagaagttctt
ctactcgaacatgatgttccccatcaacctttctcccaggctgtccttagtttcctacca
aaaatgccatggagcatcacagaaaaggatatgaaatacagggaggacttaaggcagctg
tgtgtttgtagtgtggatcctcctggctgtacagatattgatgatgcattacattgtaga
gaactagaaaatggaaatctggaggttggtgtacatattgcagatgtcagtcattttatt
cgaccaggaaatgctttggatgaggaatcagcaaaaagaggaacaacagtgtatctgtgt
gaaaaaagaattgatatggttccagagttacttagctccaacttgtgttccttgagatct
aatgtggacaggcttgcattttcatgtatatgggagatgaaccataaggctgaaattcta
aaaaccagatttacaaagagtgttattaattccaaggcatctctcacatatgctgaagca
cagatgagaattgattcagcaggcatgaatgatgatgttactaccagcttacgtggacta
aacaaattagcaaaaattctgaagaagaaaagaattgataatggagctttaacactttcc
tcaccagaagttcgtttccacatggacagtgaaactcacgatcccattgatctacaaact
aaggagcttaaagaaacaaattccatggttgaagagttcatgttgcttgccaatatctct
gtagcacaaaaaatatatgatgagttctcagagtttgccttgctccgaaaacatcctgct
cctcccccatcaaattatgacatacttgtgaaggcagcaaagtctaagaatttggaaatt
aagacagattcggcraaggcattagctgagtctttagacaaagctgagtctcctgctttc
ccatacctaaatacactgttgcgaattttaaccactcgatgcatgatgcaagctgtttat
ttctgttctggaatggataatgattttcatcactatggcttagcatcacctatttataca
cactttacctcacccattagaaggtatgctgacattatagtacatcggcttttggcagtg
gctataggagcagacagtacatacccagaacttacagataaacacaaactagcagatctc
tgtaaaaatctcaattaccgacataaaatggctcagtatgcacaaagagcatctgttgca
ttccatacacagctgttcttcaaaaccaaaggagaggtgaatgaagacgcatatatatta
tttgtaagaaagaacgcaattgtggtcctgattcccaaatacgggttagaaggaacagtc
ttttttgaagaaaaagataaaacaaaaccaagacttgattacaacagtgaggtaccatca
cttactgtggaagacacaacattccgtatatttgacaaagttaaagtgaacattatgtta
gatgcttctaacatccaacatcagaaaattcgcatggtattggtagaaccaaagatacca
ggaaaagatgtgcctgcaaatccaactacagaggcaagtgtcagcaatgaaccagagaaa
aagaaaaagaaattacaaaaatag
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