Apteryx rowi (Okarito brown kiwi): 112964588
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Entry
112964588 CDS
T07573
Symbol
PCDH17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arow04515
]
112964588 (PCDH17)
Cell adhesion molecules [BR:
arow04515
]
Cadherins
Protocadherins
112964588 (PCDH17)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
112964588
NCBI-ProteinID:
XP_025918651
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MYLSICCFFLCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLQPGTVGGGLLPPERGG
GSGPGGRGPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCRRSAKCQLSLEVFAN
DQEICMIKVEIQDLNDNAPAFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLL
TRDDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQINV
RLIDSNDNSPIFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPERVR
DLFSIDPQSGLIRVKGNLDYEENGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAPTI
GFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFALEENYDN
FYTVVTDRPLDREAQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPHFSKSLYVLQ
VPENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKHFEFHVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNA
GVGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAEL
VVKVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSI
ILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGSSSGGGKGKKKKI
SKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASN
NLTVPQGHVGCHASFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKD
PERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTASTKSQPLDQEQQGRGQRP
IIGICGPARCEEGKFSDQEECVNCTDECRVLGHSDRCWMPQFPTASQAENADYRTNLFVP
TVETNVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSAS
SSPTKTCIEPCTSTKGPLDGCEVKSGALAEPSSQYLSTDSQYLSPSKQSKDAPPFIASDQ
MARAFADVHSRVSRDSSEMDSVLEQLDRSARDLGRESVDAEEVVREIDKLLQDCRGSDPV
AVRK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcctctgctgggctcccgccctgtcgctgaagaac
ctgaattactcggtgccggaggagcagggagcgggcacggtcatcgggaacattggccgc
gatgcgcggctgcagccgggcacggtgggcggcgggctgctgcccccggagcgcggcggc
ggcagcggccccggcggccgcggccccaagtccaccttccgggtgctggagaattcggcc
ccgcacctcctggatgtggacggcgagagcgggctgctctacaccaagcagcgcattgac
cgtgaggcgctgtgccggcgcagcgccaagtgccagctgtcactcgaggtgttcgccaac
gaccaggagatctgcatgatcaaggtggagatccaggacctgaatgacaatgcgccggct
ttcccctctgaccaggtggacatggacatctcggaaaatgctgcaccgggcacccgcttc
cccctcaccagtgcccatgatccagatgctggggacaatgggctgcgcacctacctgctc
acccgtgatgactacggcctcttctccctcgacgtgaagtcccgcggagatggcacaaag
ttcccagagctggtcatccagaagcctttagaccgtgaggagcagagccaccacaccctg
gtactgaccgcgctggatggtggtgacccaccgcgctcgggcaccgtgcagatcaatgtg
cgccttattgactccaatgataacagccccatttttgaggctgcttcctatgtggtggag
ctaccagagaacgcgccactgggcactgccgtcatcgacctcaatgccaccgatgccgac
gagggcaccaacggggaggtgctctactcatttagtggctacgcgcccgaacgtgtccgt
gatctcttcagcatcgacccgcagagtggccttatccgtgtcaagggcaacctggactat
gaggagaacggcctyattgagattgacgtccaggcccgagacctcgggcccaatcctatc
cctgcacactgcaaggtcactgtccgcctcatcgaccgcaatgacaatgcacccaccatc
ggctttgtctccgttcgccagggagcactgagcgaggctgcccctccaggcactgtcatc
gccctggtgcgggtcaccgaccgtgactcaggcaagaatggacagctccagtgcagggtg
ctgggyggtggcggcgggcccggtgccgtcccctttgccctggaggagaactatgacaat
ttctacactgtggtcactgaccggcctctggaccgtgaggcacaggatgagtacaacgtg
accatcgtagcccgtgatgggggcaaccccccactcaactccaccaagtccttctctgtc
cgaatccttgacgagaatgacaaccctccccacttcagtaagagcctctatgtkctgcag
gtgcctgaaaataacatccccggagagtacctgggctctgtcttggcccaggaccctgat
ctgggccaaaacgggacagtctcttactccatcctgcctgggcacgttggcgatgtctcc
atctacacctacgtctctgtcaaccccacaaatggtgctatctatgccttgaggagcttc
aactatgagcagaccaagcactttgagtttcatgtgctggccaaggactcaggttcgccc
caccgtgagagtaatgccacggtacgtgtcactgtgctagatgtcaacgacaatgcacct
ctcattgtcctgcccgccctcatcaatgacaccgccgagctgcaggtgcctcgcaacgct
ggtgtgggctaccctgtgggcaccgtccgtgccctagacagtgactttggagagagcggg
cgcctcacgtatgagattgtggaaggcaatgaggagcacctctttgagatggacccaact
agtggtgagatacgcaccttgcacccgtactgggaggagctcagccctgtggctgagctg
gtggtaaaagtcagtgaccatggcaagcccagcctttccgcagtggccaagctcattgtc
agggccttggctgggcccctgcccgaggctggcgagccgcaggtgaatggtgagcagcat
cggcgaccacactgggacttgtcactgcccctgatcgtgaccctgagcactgtctccatc
atcttgctggctgccatgatcactattgccgtgaagtgcaagcgagagaacaaggagatc
cgcacctataattgtcgcattgccgagtatagccaccctcagctgggaggagggggaggc
agtggcgggggaggaggaggcagtagcagtggagggggcaagggcaagaagaagaagatc
agcaagaatgacattatgctggtgcccagtgagggcgaggacagccggggccccctcaat
gtcatgaacgtggtgagcagcccatccctggccacctcacccatgtactttgattaccag
acccgcctgcccctcagctctcccaggtctgaggtgatgtacctgaagcccgcctccaac
aacctgactgtaccccagggacatgtgggctgccacgccagcttcacagggcaagggact
aacgccagcgaggctcccccgagccggatgtccataattcagacagacaattttcccgca
gagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccactttcaaggat
ccagaaagagccagcttgagggacagcgggcatggggacagtgatcaggctgacagtgac
caagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatgaaa
actgcttcaactaaaagccagccacttgaccaagaacagcaaggcagaggccaaagaccc
atcattgggatctgtggaccagcccgctgtgaggagggaaaattttcagaccaagaagaa
tgtgttaactgtacagatgaatgcagagtgcttggtcattctgacaggtgttggatgcca
cagtttcctacagccagccaggctgagaatgcagattatcgcacaaatctctttgtaccc
acagttgaaactaatgttgagactgagacttacgaaactgtgaatcccactgggaaaaag
actttttgtacatttgggaaagacaagagagagcacactattctcattgccaatgttaaa
ccttacttaaaagccaaacgtgccctgagtcctctgcttcaggaggttccctcagcatcg
agcagcccaaccaagacatgcattgagccttgcacctcaacaaaaggaccactggatggc
tgtgaagtgaaatcaggagccttggctgaaccaagcagccagtacttgtcaactgacagt
cagtacctatcgcctagtaaacagtcaaaagacgctcccccgttcattgcgtcagatcag
atggccagggcctttgccgatgtacattcccgagtgagccgagactcgagcgagatggac
tctgttctggagcagttggaccgttcagcccgggatctaggcagggagtcggtggatgcc
gaggaagtcgtgagagaaatcgacaagctcttgcaggactgtcggggaagcgaccctgtg
gccgtgagaaagtga
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