Apteryx rowi (Okarito brown kiwi): 112964651
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Entry
112964651 CDS
T07573
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112964651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112964651
03041 Spliceosome [BR:
arow03041
]
112964651
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112964651
Spliceosome [BR:
arow03041
]
Complex B
Other components
Prp19-related factors
112964651
Complex C
112964651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_2
HAT_PRP39_N
HAT_PRP39_C
TPR_8
TPR_15
TPR_12
TPR_1
RPN7
Motif
Other DBs
NCBI-GeneID:
112964651
NCBI-ProteinID:
XP_025918808
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MTMVLLVAWVLMVVAMAVAQAPVGASHPVGPLMVTTMVMEVAWVLMAVAMAVAQAPVGAS
HPVWLLIATTMAMEVAWVLMAMAMEVAWVLMTMAMEVAWVYKLWYNYLKQRRKQVKHKCV
SDPAYEEVNNCHERALVFMHKGRVTRTRRTFDRALRALPITQHHRVWPLYLQFVRRHPLP
ETAVRVYRRYLKLSPENAEEYIEYLRSIDRLDEAAVRLAVVVNDERFVSKEGKSNYQLWH
ELCDLISQHPDKVKSLDAGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEA
VQTVMTVRDFTQVFDSYAQFEESVIAAKMETVSELGKEEEDDVELELRLARFEQLIARRP
LLLNSVLLRQNPHNVHEWHKRVQLYQGRPGEVGAAPGPPGPKPRGRAWDGDTGAEIVGTR
SRMGTCSRMGPPGLKSWGHALGWGHWGGNKGGHAWHGDTRVGTERTWLVWGHWGENREDN
FGMGTPE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggtcttgttggtggcttgggtgctcatggtggtggccatggcagtggctcag
gcgcccgtaggtgcttctcacccagttgggccactcatggtcacgacgatggtcatggag
gtggcttgggtgctcatggcggtggccatggcagtggctcaggcgcccgtaggtgcttct
cacccagtttggctgctcatagccacgacgatggccatggaggtggcttgggtgctcatg
gcgatggccatggaggtggcttgggtgctcatgacgatggccatggaggtggcttgggtc
tacaagttgtggtacaactacctgaagcagcggcggaagcaggtgaagcacaagtgcgtg
agcgacccggcctacgaggaggtgaacaactgccacgagcgcgccctcgtcttcatgcac
aagggccgcgtcacccgcacccggcgcaccttcgaccgggcgctgcgggcgctgcccatc
acccagcaccaccgcgtctggcccctctacctgcagttcgtgcgccggcacccgctgccc
gagaccgccgtgcgcgtctaccgccgctacctgaagctgagcccggagaacgcggaggag
tacatcgagtacctgcgctccatcgaccgcctggacgaggccgccgtgcgcctggccgtg
gtcgttaacgacgagaggttcgtctccaaggagggcaagtcgaattaccagctgtggcac
gagctgtgcgacctcatctcgcagcaccccgacaaggtgaagtcgctggacgcgggcgcc
atcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgctccctg
gctgactactacatccgcagcggccacttcgagaaggcccgtgacgtctacgaggaggcg
gtgcagacggtgatgacggtgcgggacttcacgcaggtcttcgacagctacgcccagttc
gaggagagcgtcatcgccgccaagatggagacggtctcggagctgggcaaggaggaggag
gacgacgtggagctggagctgcggctggcgcgcttcgagcagctcatcgcccggcgcccg
ctgctcctcaacagcgtcctgctgcgccagaacccccacaacgtccacgagtggcacaag
cgggtgcagctctaccagggccgccccggcgaggtgggtgctgcgccggggcccccgggg
ccgaaaccgcggggacgcgcttgggatggggacaccggggccgaaatcgtggggacacgc
tctaggatggggacatgctctaggatggggccaccggggctgaaatcgtggggacacgct
ctaggatggggacactggggtggaaataaggggggacacgcttggcatggggacaccaga
gtgggtacagagaggacatggttggtgtggggacactggggtgaaaatagagaggacaac
tttggcatggggacgccagagtga
DBGET
integrated database retrieval system
