Apteryx rowi (Okarito brown kiwi): 112964803
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Entry
112964803 CDS
T07573
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112964803 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112964803 (IRF1)
Transcription factors [BR:
arow03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
112964803 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
112964803
NCBI-ProteinID:
XP_025919129
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MAAASGAAARRDRAGERAAPRYLSLSGISRLPRFPGKSRQPAALEAERSGVACCQAGAAP
RAAPCGASHGPAAAAGAQSCAISRRSGGAALAGQAEDNMPVSRMRMRPWLEMQINSNQIP
GLIWINKDKMMFQIPWKHAAKHGWDMEKDACLFRSWAIHTGRYKIGEKDPDPKTWKANFR
CAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQKKERKSKSSRESRNRSKRKSYED
TRTEESVERLTNTSLPDDHSGYTAHGYTGQEVEVESPSITLDLSPCEVNCPLTDWRTHME
IAMADSTNDLYPLQVSPLASSSEAVTDEDEDEMKSEIFKLLEPAPEWHATSVGGKGYLTN
EPGSQSGCGAYSYKEQDAEIDTTSGELEFRFFDQKTSLDFSWLETARVPMQAISCGL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcgagcggggcagcagcgcgcagggaccgcgccggcgagcgcgcagccccc
cgctacctctcgctctccggcatcagccggctcccacgttttccagggaaaagccgccag
ccggcggcgctggaagcggagcggagcggagttgcctgctgccaggccggggctgcgccc
cgggcagctccgtgcggcgcttcgcacgggccggccgcggccgcgggagcgcagagctgc
gcgatcagccggcggagcggcggtgctgcccttgccgggcaggcggaagacaacatgcca
gtgtccagaatgcgcatgaggccctggctggaaatgcagattaattccaatcaaatacca
ggactgatatggattaacaaggacaagatgatgtttcaaatcccctggaaacacgcagct
aagcatggctgggacatggagaaggatgcctgcctcttccggagctgggccattcataca
ggaagatataagataggtgagaaagaccctgaccccaagacctggaaggcaaacttccgc
tgtgctatgaactccctgcccgacattgaagaagtgaaggacaaaagcatcaacaaaggc
tccagcgcagtcagagtgtaccgaatgctgccgccgctgacgaaggatcagaagaaagag
aggaagtcaaagtcatcaagagaatcaagaaacaggagcaaaaggaagtcgtatgaagac
acgaggacagaggagtcggtagaaagactaaccaatactagtctcccggacgaccacagt
ggytacacagcgcatggctacacgggccaggaagtggaggtggagagcccatccatcacc
ttagacctctccccctgcgaggtgaactgccccttgaccgactggaggacgcacatggag
atcgccatggctgacagcaccaacgacctctacccgctccaggtgtcccccctggcttcg
tcctcggaagcagtcacagacgaagatgaagatgaaatgaagtcggagatttttaagctg
ctggagccggcgccggagtggcacgcgaccagcgtcggggggaaaggctacctcaccaac
gagcccggctcgcagagcggctgcggcgcctacagctacaaggagcaggacgccgagatc
gacaccacctcaggagaactagagttccgattcttcgaccagaaaaccagcctggacttc
tcctggctggagacggccagggtccccatgcaagccatctcctgcggcttgtag
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