Apteryx rowi (Okarito brown kiwi): 112964981 Help Entry 112964981         CDS       T07573                                  Symbol CUX1 Name (RefSeq) protein CASP   KO K09313   homeobox protein cut-like Organism arow  Apteryx rowi (Okarito brown kiwi) Brite KEGG Orthology (KO) [BR:arow00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:arow03000]     112964981 (CUX1) Transcription factors [BR:arow03000]  Eukaryotic type   Helix-turn-helix    Homeo domain CUT     112964981 (CUX1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CUT Homeodomain Homeobox_KN Motif Other DBs NCBI-GeneID:  112964981 NCBI-ProteinID:  XP_025919417 Ensembl:  ENSARWG00000005172 LinkDB All DBs Position Unknown AA seq 1536 aa AA seqDB search RRAGAARALLAFRCTGRCGRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDLRK QVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDI ETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQND FAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEM IMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVE LAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADY EEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSAR RKGKDQPESQRPATLPASPPSQLLRNVGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLP LASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNG MAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILA RPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNG SEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSILQ QARREMEAQQAALEPALKTPPLSQADISILSPKLPTPAMSSVSSFSPLAMSLKKHSSVTD SSISALQNLSGLKKEPQEAPGLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNTVQHER RNTALPEDTKVEEASVGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSELSMT GASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAK NGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVLPAQ GQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPC PAIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEV LTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL MDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEA LKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQAGA SDSPSARSNRAAHSSEGDSCDGVDAEGPPEGKPSGPEADEYSNATTKSQGGPAESAFEAG EEALQGARSSEKSESFHLGMESLEDTDDEGRLKAPRQSSPPGSQRSGESLETLPNSATEG DASTSAASTSVLTGESSYKPKESSEKIPSVPSTSSTVAAGLQKANSIQSLFSFSEAASSK NTRDNSLRKKKAANLNNIIHRLEKAASREEAVEWEF NT seq 4611 nt NT seq  +upstreamnt  +downstreamnt cgccgcgccggagctgcccgggcccttctggctttcaggtgcaccggccgctgcgggagg gagcttgatgccacagcaacaatattggctaaccggcaagatgaaagtgagcagtctagg aaaaaacttattgagcaaagtcgcgagttcaagaaaaacactccagaggacctgcgcaaa caggtagctccattactgaagagtttccagggagagattgacgcgttgggcaaaagaagc aaagaagcagaggcagccttcttgaatgtgtataagagattaattgatgttccagatccg gttccagccttggatttaggacagcagcttcagctgaaggttcagcgtatgcacgatatt gaaacagagaaccagaaacttagggaaactctagaggagtacaataaggaattcgctgag gtgaaaaatcaggaggttacaataaaagcacttaaagagaaaatccgagaatatgaacag accctgaagaaccaagctgagaatatagcacttgagaaagaacaaaagttacaaaatgat ttcgcggagaaggagagaaaattgcaggagacacagatgtcaacagcctcaaagctggaa gaagccgagcacaaagttcaagctttgcaaacagccttggaaaaaaccagaacagaacta tttgatctgaaaacaaaatacgatgaagaaactactgcaaaggctgatgaaattgagatg atcatgacagacctcgaaagagcaaatcagagggcagaggtggctcagagagaggcagag accttaagggagcagctctcgtcagccaacaaatctctccaactcgctacgcagatccag aaggcacctgatgtggagcaggccatcgaggtgctaacacggtccagcttggaagtagaa ctggctgcgaaggagcgggaaattgcccagctcgtagaagacgtccagagactccagggc agcctcaccaaactgcgggagaactccagcagccaaatctcgcagctggagcagcagctg actgccaagaacagcacactcaaacaactggaagaaaaactgaaaggacaggctgattat gaagaggttaagaaagaattaaatatattgaaatccatggagtttgcaccatctgaaagc tctggtgcgcaggatgcatctaagcccctggaggtgctgctgctggagaagaaccgctca ttgcagtctgagaacgccacgctgcgtatcactaatagtgacctgagtgggtcagccagg agaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcctcccctcct tctcagttgctccgcaacgtgggggagcaggcttccaatactaatggtacacaccagttc tcaccaacgggtttaagtcaagactttttcagctcatccctggcaagccccagcttaccc ctggcctccacaggaaaatttgcactaaactctctcctccagcgacagctaatgcagtcc ttctactccaaggcaatgcaggaagcaggaagcacaagcatgattttttcaacaggtcct tacagcacaaactccatatcttcccaaagtccattacaacaaagtccggatgtaaatggc atggccccgtctcccagccagtcagaaagtgctgggagcatctctgaaggcgaggagata gacacggccgaaattgcacgtcaggtgaaagagcagttgatcaagcacaatattggacag cggatatttggacattatgtgttgggactgtcgcaagggtctgtgagtgagatcctagcc cggccaaagccatggaataaactgactgtgagaggcaaggagccatttcataagatgaag cagttcctctcggacgagcagaacatcttggctcttcgcagcatccagggtagacaaaga gagaatccaggccagaacctgaacagactatttcaggaagtaccgaaacgaagaaatggg tctgaaggtaatataacgacaaggatccgaaccacagagacgggctctgatgaagccatc aaatccattctagaacaagccaaaagggagctgcaagtacagaaaacagctgagccggct cagccgccttctgcatctagcagtggcaattctgatgatgctattcgatccattctgcaa caagcccgacgcgaaatggaggcacagcaggctgcccttgaacctgccttaaaaacacca cctttatctcaagctgacatatctatcctgtcccccaaactacctacacctgcaatgtct tcggtttccagcttttctcctttggccatgtccctgaagaaacattcatctgtcactgat tccagtatctccgcattgcagaacctctctgggctcaaaaaggagcctcaggaggcacct ggtttagagcttcatggaataagtgattctgcccagggtatgttgaggcatgttaaaaat gagttgggacgtggtggtgtttggaaggaccattggtggaatactgttcagcatgagaga agaaacacagctcttcccgaagacacaaaagttgaggaagccagtgttggaaaagaaaag gtcagcaatcagactaggccagatcgtagccagcttcaaggaccatcttcttcagagtat tggaaagagtggccaaacgctgaatctccgtactcccagagttctgagttgagcatgact ggggcaagtcgcagcgagacgccacaaaatagccccctcccttcgtcccctattgtgtct ttgtcaaagccatccaaaccttcggttcctccactgacacctgagcagtacgagatttat atgtaccaggaggtggatacgatagaactaactcgtcaggtcaaagaaaagctagcaaag aatggcatctgccaaaggatctttggggaaaaggtattggggctgtcccaaggaagtgtc agtgacatgctctccaggccaaagccatggagcaaattgacccaaaaaggccgagaacca tttattcgtatgcagctctggttgaatggtgagctgggacagtgtgtcctgcccgcgcaa gggcagcaacaaggacaagtccttcactctgtgacatcattgcaggattccctacagcag ggatgtgcaagctcagaaagcactccaaagacttctgccagttgcagtcctgctcctgaa tctcctatgagctccagtgaatcggtgaagagcctgaccgaattggtacagcaaccctgt cctgctatagagacaagtaaggatggcaaatcacaagaatctagtgagccacctgcctcc gaatcccaatctacaacacctttgcctctgtctggccactcagccctcagcattcaagaa ctggttgctatgtcacctgaattggatacgtatggcattacaaaaagggtcaaagaagtg ctgacggacaacaatcttggtcagcgtttgtttggggagacaatcctagggctaacacaa ggctctgtctcagaccttctggctcgccctaagccctggcacaagctgagtttgaaggga cgggaaccctttgtccgcatgcagctgtggctcaatgatcccaacaacgtggagaagttg atggatatgaaacgaatggagaaaaaagcctacatgaagcgacggcacagctccgtcagc gacagtcagtcctgcgagtcctcgtcggccggcatagactacagccagggagccagcccg cagccgcagcaccagctgaagaaaccccgtgtcgtgctggcgccggaggagaaggaagct ctgaaacgagcctaccagcaaaagccatacccatcaccaaaaaccattgaggaactcgcg acgcagctcaacttgaaaaccagcacggtgatcaactggttccacaattacagatctcgc atccgtcgagagctgttcatcgaagaaatccaagcgggaagccagagccaggctggggcg agcgattctccttcggctagaagcaacagggcggcgcacagctcggagggggacagctgt gacggcgtggacgccgaaggcccacctgaagggaagccgagtggcccggaggcggatgag tacagcaatgcaaccacaaagtctcagggagggccagcagagtcggctttcgaagcgggg gaagaggcactgcagggcgccaggtcttcagagaaaagcgagtcattccacttgggaatg gagagcctggaggatactgatgacgagggcaggctcaaagcgccgcggcaaagctctcca ccaggatctcagcgttcaggagaaagtctggagacactgccaaactctgctacggaaggg gatgcctctacctcagctgcctccacctcagtccttacaggggagagctcctacaagccg aaagaaagttcggagaaaattcccagtgtgccaagtacgagctcgacggtggccgcaggc ttgcagaaagccaactcgattcagagcttgttcagcttctcggaggcggcgagctccaag aacacgcgagacaactccttgaggaaaaagaaagccgcaaacttgaacaacataatccac cgcttggagaaggccgctagtcgagaagaggccgtcgagtgggagttttga

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