Apteryx rowi (Okarito brown kiwi): 112965054 Help Entry 112965054         CDS       T07573                                  Symbol LIG3 Name (RefSeq) DNA ligase 3   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism arow  Apteryx rowi (Okarito brown kiwi) Pathway arow03410   Base excision repair Brite KEGG Orthology (KO) [BR:arow00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     112965054 (LIG3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:arow03400]     112965054 (LIG3) Enzymes [BR:arow01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      112965054 (LIG3) DNA repair and recombination proteins [BR:arow03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      112965054 (LIG3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  112965054 NCBI-ProteinID:  XP_025919524 Ensembl:  ENSARWG00000005116 LinkDB All DBs Position Unknown AA seq 992 aa AA seqDB search MPTGARTLAQAARALGRGTALCLQHTRASLPGLPFCCVGFPGASPCFWYRLLVRTVSFWC VGGGAGGLHLPLPLHAGPRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIG KIVPNPFTESGGDMKEWYHVKCMFEKLEKARATTKKIEDITDLEGWEELQDDEKELINKH ISEATSKVASTPKKKATVQAKISATGQITSPKKDLLGIVNPSPKKFSGFTAKPKNLEDVS ANSSHKSSLSAKKCDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIQDFLQKGTGGDGFH GDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMVRDLEQGDVSETIRLFFEQ SKSCPPVAKSLLTIQEVDEFLIQLSKLTKEDDQQSVLQDITRRCTGNDLKCIIRLIKHDL KMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNHQEAEKVPGLKRTLSVQASLMTP VQPMLAEACKSIDYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH FKDFIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF NDISLMDRPLRERRKFLHDNMVEIPNRILFSEMKLVAKASDLADMITRVIREGLEGLVLK DIKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKS EKWCTVTKCAGGHDDATLARLQTELDMVKISKDPSKIPGWLKINKIYYPDFIVPDPKKAP VWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLPQLKELYQLSKEKADFSV VAGEEEESTAGSSGENEGNSRSSTPHKTIKTPPSKSPAKAKKLEGSKAVIASPQKLEERR GEKRKASEMDDNGKKALLDIFTGVKLYLPPSVKDFDKIRRYFIAYDGDLVQEFDTASATH VIGDIDENPGAKRVSPNWIWECIRKRRLVAPC NT seq 2979 nt NT seq  +upstreamnt  +downstreamnt atgcccacaggcgccaggacactcgcacaggctgcccgggcactcggcaggggcacagcg ctctgcctccagcacacacgggcctccttgccgggactccccttttgctgcgttggcttc cccggagccagcccctgtttctggtaccggctgctggtgaggaccgtgtctttctggtgc gtgggtggtggtgctggaggtctccatttgcccctgcctttgcatgctgggcctcgccag gcctgcacagctgcagaggacatggcggagcagaggtactgcgtggactatgccaagcgt ggcacggcgggctgcaagaaatgcaaggagaagatcgtgaaggggatggtgcgtattggg aagattgttcccaaccccttcacggagtctggtggggacatgaaggaatggtaccatgtg aagtgcatgtttgagaagctagagaaggcccgggctaccaccaagaaaattgaagacatc acagatttggaagggtgggaagagctacaagatgatgagaaagaattaatcaacaagcac atctcagaagctacttccaaggttgcaagtacaccgaagaaaaaagcaacagtccaagct aagatctctgccactggacaaataaccagtcccaagaaagatctgttaggtatcgtcaat ccatcaccaaagaagttctctggcttcacagctaagccaaagaatttggaagatgtctct gcaaactcttcccacaagtctagcctgtctgcaaaaaaatgtgatccgaagcacaaagac tgcttgctgcgagagttcaggaaactctgtgccatggttgctgacaagcctagttataat gtgaaaacacagatcatccaggacttcctgcagaagggaactggaggagatggttttcat ggtgacgtatacctgactattaaactgctgttaccaggtgtcattaaaattgtttacaac ttgaatgataagcagattgtaaagctgtttagtaggatttttaactgcagccaagaggaa atggtccgggacttggaacagggagatgtttccgagaccatacgcctcttctttgaacag agcaagtcctgtcctccagttgccaaaagtctcctgaccatccaagaggtagatgagttc ctaatccagctatcaaagcttacaaaggaggatgaccaacaaagtgtgctgcaagatatc actcgcaggtgtacaggcaacgacctgaaatgcatcatcaggctaatcaagcatgacttg aaaatgaatgctggtgcaaagcatgtgttggatgctttggatccaaatgcctatgaggca ttcaaagcctcacgcaatctccaggatgtggtggagcgagtcctgaggaaccaccaggag gctgagaaggtgccaggtctgaagcgaaccctcagtgtgcaggcctctctgatgactccc gttcagcccatgctggctgaagcctgcaagtcaattgactatgctatgaagaagtgccca aatgggatgtatgcagagatcaaatatgatggggagcgggtgcaggtgcataaaaatgga gatcatttcagctacttcagccgaagcctcaaacctgtcctccctcacaaagtagcccat tttaaggacttcatcccccaggctttccctggtggccacagtatgatcctggattcagaa gttcttctgattgataacaaaactggcaagccgcttccttttgggactcttggtgtgcac aagaaagctgcttttcaagatgccaatgtttgcttgtttgtgtttgactgcatctatttc aatgacatcagcctgatggacaggcccctgcgtgaacgtcgtaagtttctccacgataac atggttgaaatccccaaccggatcctcttctcggagatgaagcttgttgcaaaagcttca gatctggcagatatgatcacgcgagttatccgtgagggcctggaaggactggtgttgaaa gatataaagggtaattatgagccaggaaaacggcactggctgaaggtgaaaaaggactac ctaaatgagggtgcaatggctgacacagcagacctggtggtgctgggagctttttatgga caaggcagtaaaggtgggatgatgtccatcttcctcatgggttgctatgatcccaagagt gagaagtggtgcactgtgaccaagtgtgctggtggccacgatgatgccaccttggcccgc ctgcaaacagagctggatatggtgaagatcagcaaggatcctagtaaaattccaggctgg ctaaaaattaacaaaatctactaccctgacttcattgtcccagatccaaagaaagcccca gtgtgggagatcacaggggctgaattctccaaagcagaagcccacactgcagatgggatc tctattcgcttccctcgctgcacccgcattcgagatgacaaagactggaagacagccacc aatctcccacagcttaaggagctgtaccaactctccaaagaaaaggctgatttcagtgtt gttgctggggaggaagaggaatccacagctggcagcagtggagagaatgagggaaattcc aggtcttccacaccacacaagactataaaaactcccccaagcaaatcgcctgcaaaagcc aagaagctagaaggcagcaaagcagtcattgcatcccctcagaaattagaagagagacga ggggagaagcgaaaagcatctgagatggatgacaatggaaagaaggcgctgctggacata ttcactggtgtgaagctgtacctgccaccctctgtgaaggacttcgacaaaatccggcgg tactttatagcatacgatggggatcttgtgcaagagtttgacacagcctcagcaacacat gttataggggacattgatgagaatcctggtgctaagcgtgtgtctcccaactggatctgg gaatgcatccggaaacggagactggtagctccatgctaa

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