KEGG   Apteryx rowi (Okarito brown kiwi): 112965069
Entry
112965069         CDS       T07573                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:arow00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:arow01009]
    112965069 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arow03036]
    112965069 (KDM5B)
Enzymes [BR:arow01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     112965069 (KDM5B)
Protein phosphatases and associated proteins [BR:arow01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112965069 (KDM5B)
Chromosome and associated proteins [BR:arow03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112965069 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 Exo70_N PHD_2
Other DBs
NCBI-GeneID: 112965069
NCBI-ProteinID: XP_025919549
Ensembl: ENSARWG00000007789
LinkDB
Position
Unknown
AA seq 1521 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPELTSD
TKDKEYKPHDIPQRQSVQPSETCPPARRAKRLRAEATNIKTESEAPEVRTHNLRRRMGCA
PPKCENEKEMHSTVKLPEKREHTGEPEKDKSKVRSKKPTNAVDLYVCLLCGSGNDEDRLL
LCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEM
ADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKF
KVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS
YSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHG
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLNRYC
VFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKMLRERVHKLGVTDSERVAFELF
PDDERQCLKCKTTCFMSAVYCSCKPGLLVCLYHVEDLCSCPTYKYKLGYRYTLEELYPMM
NALKLRAESYNEWASNVNEALEAKINNKRSLISFKALIEESEMKKFPDNDLLRHLRLVTQ
DADKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRLFVRQLYALPCVLSQTPLLKDL
LDRVEAFQQHSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRIRLEQARWLEDVQL
ASSDQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ
SLSSLVAAVREMEEIPAYLPNGVALKDAVQKAKDWLQEVEALQVGGRVPVLDTLVELVTR
GRSIPVHLDYLPRLESLVSEVKAWKECAANTFLYENSPYSLLEVLCPRCDIGMLNLKRKQ
KKLKEPVPSGKKKSTKLESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEV
KVLSNEEDAEMKVCLCQKEPAAPMIQCELCRGFFHTSCVSVPSTLQGPRVWLCPHCHRSE
KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLMQDKVGSG
LLYNRWQATAGQLPETNKVSQTIGAMSFSMPRDWDNRTIYLHSSFSTGQHCIPLHVISTE
LDELMMEAQLLQVSLPEIQELYQILFTKQSPAPQKEERSSAGPANEKNECCRGKKDGISY
MERKLKRRFERESFCDEKRARVKQMRTPKKKKLKLNHSKDLCNNRLERERERLFEMQRSS
ESHLFPSDMSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISPE
MAEKEDYICISCTGKDSQYRK
NT seq 4566 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgccccgtgttcgagcccagctgggaggagttc
gccgaccctttcgccttcatccacaagatccggcccatcgccgagcagacgggcatctgc
aaggtgcggccgccgccggactggcagcctccatttgcatgtgatgttgataagcttcac
tttactccacggatccagagactcaatgaactggaggctcagacccgtgtaaagctgaat
ttcctggaccagattgcaaagttttgggaacttcaaggatgcacgctgaaaattccacac
gtggagaggaagatcttggatttatttcagcttaataggctagttgcagaagaaggagga
tttgatgtagtttgcaaagagagaaaatggaccaagatagccaccagaatgggatttgct
cctggcaaagcagtgggttcacacatccgtgcccattacgaacgtatcctctatccttac
aacttattccagtctggagctagcctattgtgtttgcagaagccagagctcaccagtgac
acaaaggacaaggaatataagccccatgatattccgcagagacagtctgttcagccatct
gaaacttgtccacctgctcgtcgagcaaaacgcctgagagcagaggccaccaatattaaa
actgaatcggaagctccagaagtcagaactcataatctaagacgtagaatgggatgtgca
cctccaaagtgtgaaaatgaaaaggaaatgcatagcacagtgaaacttcctgagaagaga
gaacacactggggagccagagaaagacaaatccaaagtccggtctaaaaaacccactaac
gctgtggatttgtatgtatgtctcttatgtggcagtggtaatgatgaggaccgtctcctg
ttgtgcgatggctgtgatgacagttaccatactttttgtttaattccaccccttcatgat
gttcccaaaggagactggaggtgtccccagtgtctggctcaggagtgtaataaacctcaa
gaagcatttggttttgaacaagcagcaagagactatacgcttcgcacattcggagaaatg
gcagatgcattcaagtcggactattttaacatgccagtacatatggtccccacagagctg
gttgaaaaagaattttggcgactcgttagtaccattgaagaggatgtcacagtggaatat
ggagctgatattgcttcaaaggagtttggcagtggctttccagttagagatgggaaattt
aaagttagaccagaagaagaggagtacctggatagtggctggaatttgaacaacatgcct
gtaatggagcagtctgttcttgctcacatcactgcagacatatgtgggatgaaattaccc
tggctatatgtaggaatgtgcttttcttcattttgttggcatattgaagaccactggagc
tattcaataaactacctgcattggggggagcctaaaacgtggtatggagccccagggtat
gcagctgaacagctggaggatgtaatgaagaagcttgctccagagctatttgaatctcag
ccagatctcttgcaccaacttgtcaccataatgaacccgaatactttgatggcccacgga
gtacctgtttatcgaaccaatcagtgtgctggagaatttgtcatcacttttccaagagct
tatcacagtggcttcaatcagggtttcaattttgctgaagctgtgaacttctgcacagtt
gactggttacctttgggtcgccaatgtgtggaacattatcgtctgctaaaccgttactgt
gtgttttctcacgatgagatgatatgtaaaatggcttccaaagcagatgttcttgatgtt
gtggtagcatctactgttcagaaagacatggcgattatgatcgaagatgagaagatgttg
cgtgagagggttcataaactgggagtgactgactcagagcgagtggcttttgagttgttt
cctgatgatgagcgacaatgtttaaagtgtaaaaccacttgtttcatgtctgctgtttat
tgttcatgtaaacctgggttacttgtatgcctgtatcatgtagaagatctctgttcctgt
cccacctacaaatataagttggggtaccgatatactctggaggaactctatccaatgatg
aatgcactgaagttgcgtgcagaatcatacaatgaatgggcttccaatgttaatgaagct
ttggaggcaaaaattaacaataaaagaagtctcatcagttttaaggctttgatagaagaa
tcagaaatgaaaaagtttccagacaatgatctactgcgacatctcagactagttacacag
gatgcagacaaatgtgcttcagttgcacagcagcttcttaatggcaaaagacaaaccagg
taccgctctggaggaggaaaatctcaaaatcagctgactgtgaatgagctgcggttgttt
gtaagacagctgtatgctctaccctgtgtcctcagtcagacaccattactgaaggatctt
cttgatcgtgtggaagctttccaacaacatagccaaaaactcctctctgaagaaatgcct
agcgctgcagaacttcaggagctgttagatgtcagctttgactttgatgttgatcttccc
caacttgctgaactgcggatacgtctggaacaggcacgctggctagaggatgtgcagctg
gcttcttcagaccaaaactcccttactctagatgatatgagacgccttatagattcaggt
gttggattggctccctacccagcagttgagaaagcaatggcaaagctacaagaactcctt
actgtatctgaacactgggatgacaaagccagaaatctgataaaggccagaccacggcag
tcgctgagcagtctcgtggcagcagtgagagagatggaggagattccagcctatctccca
aatggtgttgcactgaaagacgcggtacagaaggccaaagattggttgcaagaagtagaa
gcattgcaggttggaggacgtgtacctgtactagacacgctagtggaacttgtcacaaga
ggccgatctattccagtgcatctggactacttaccaaggcttgagtccttggtgtcggaa
gttaaagcgtggaaggaatgtgcagctaatacgtttctgtatgagaactccccttactct
cttctggaggtgttgtgtccccggtgtgatattggcatgttgaatcttaaaagaaagcag
aagaagttaaaggagccagtgccaagtggaaagaagaaaagcactaagctagagagtctg
agtgacttggaaagagctctttctgagagcaaagatactgcatcagcgatggctacgctt
ggggaagcccgattaaaggagatggaagcgttgcgttctcttcgagcagcaaacgaagta
aaggtgctgtctaatgaagaggacgcagaaatgaaagtctgtctatgccagaaagagcca
gctgctccaatgatacagtgtgaactctgcagagggttctttcataccagctgtgtttca
gtgcccagcactttgcagggacctcgtgtgtggctctgtccgcactgtcatcgatcagaa
aagccacctttagaaaaaatcctaccgttgctggcctccttgcagcgtattcgtgtaagg
cttcctgagggggatgctttacggtatatgatagagagaactgtgaactggcagcacaga
gcacaacaaatgttatattcagggaatctaaaactcatgcaagacaaagttggctcagga
ttattgtacaacagatggcaagccacagcaggccaattgccagagacaaataaggtttct
cagacaattggagctatgtcgttctccatgcctcgtgactgggataacagaaccatatat
ttacattcttctttttctacaggacaacactgcatcccccttcatgtcattagcacagag
ctggatgagctgatgatggaagcccagctgctacaggtttctctgcctgaaatacaggag
ctgtaccagatcctattcacaaagcaaagccctgctccacaaaaagaggagaggtcatca
gctggcccagcaaatgaaaagaacgagtgctgccgagggaaaaaggatggaattagttat
atggagagaaaattaaaaaggcgttttgaaagagagagcttctgtgatgagaagagagca
agggtaaaacaaatgagaacaccaaaaaagaagaaactgaaactgaatcactcaaaggat
ctctgcaataacagactggagagagagcgggagcgtctttttgagatgcagcgttccagt
gaaagccacttgtttccctcagatatgtcattctctgagcaggaggactctgaggatgaa
gatgccatctgccctgctgtgaactgtctccagcctgagggagatgaggtggattgggtc
cagtgtgatggcagctgcaaccagtggttccatcaggtgtgtgtgggcatctctccggaa
atggcggagaaggaagactacatctgcatcagctgcactgggaaggactctcaatatcgg
aaataa

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