Apteryx rowi (Okarito brown kiwi): 112965884
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Entry
112965884 CDS
T07573
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arow04131
]
112965884 (VPS50)
Membrane trafficking [BR:
arow04131
]
Protein recycling
Others
EARP complex
112965884 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
112965884
NCBI-ProteinID:
XP_025921142
Ensembl:
ENSARWG00000006469
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLGPIESFRIPSKEELRELREEPTDPQVQQEIINSIEEV
YFSNDSFDIVKYELEKLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTDGRRHLNIAKEGFTQASLGLLANQRKRQLLVGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLLDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYQTMQWHETRDQDEAETVSSV
SDGSNVTGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAATLFEQYCSGGNPFEIQANSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMPIQSSSLSTSNREQHSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSTDPTGTLTA
AEERKEKVPSPHLSHLVVLTSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPVYWIVAAKAIDYEQMLLLMATVKWDVKEIMSQHNIYVDA
LLKEFEEYNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctcatgacccggcagggtctaaggagtcctcaggagagtgtt
catgaccttggtcctattgaaagctttcgcattcctagtaaggaggagctccgagagtta
cgggaagaaccaactgatcctcaagttcagcaggaaataattaacagcattgaagaagta
tatttttccaatgattcctttgatattgtgaaatacgaattagagaagcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaattaaagcaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgtgtcacatcattgcagactggccttcagttagcggctgtcatttgcacagatggaaga
aggcatttaaatattgcaaaggaaggctttacacaggctagtttggggcttcttgcaaat
caaaggaaacgacagttacttgttggactactgaaatctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgaaatgttggaggaagaggactatccaggagcaatt
cagctgtgcctggaatgtcagaaagcagccagcactttcaaacactacagttgtataagt
gagttgaattcaaaactgcttgacactttggaacaaatagaggaacaattggatgtagca
ctctctaaaatatgcaagaactttgatatcagtcattataccaaagttcagcaggcttat
agattgcttggaaaaacacagacagcgatggaccagctacatatgcacttcactcaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctttgtgcaggaaacaca
gataccaagtttcagaagctacagtacaaagatctctgtacacatattacatcagacagc
tacattccttgccttgctgatctctgcaaagcactctgggaagtcatgctcagctattac
caaacgatgcagtggcatgagacgcgtgaccaagatgaggcagaaactgtatcttctgtt
tcagatggaagcaatgtgactggaactgaggagaacagttttgaccgcagctatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacg
tatcttctgggaacagacctgtctaacttcaaatatgatgacttcatatttgtacttgat
attatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaactatttcaaaacgtaccacagaacccgtctt
gaagaattaagaatgtttttggagaacgagacctgggaactttgccctgttaaatcaagc
tttagtattttgcagcttcatgagtttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacagcagcaactttatttgagcagtac
tgtagcggaggaaacccgtttgaaattcaggccaacagcaaagatgatgagacggaagat
gtgcttgcttccaacgggtatgaatcggatgaacaagaaaaaagtgcatatcaggagtat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgcccctgtgaaaagtgtttctcgagaaaccctgaggagcagaaagagatcagattat
aatctcaataaagtgaatgcacctatcctaacaaatactacgctgaatgtagtaagactt
gttgggaaatacatgcagatgatgaatattctgaaaccgattgcatttgacgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacatgcccatacagagttcctcactttctacttctaacagagaacaacacagtgctagg
cagtttgaatcaacaggactgggcctcagtagcagcagattacgcaccacactgaacaga
atccaggagagcctgattgatctggaggtctccactgatcccactggaactcttacagct
gctgaagagagaaaggagaaggtgccaagcccgcatctcagtcatcttgtagttttgaca
tctggcaattcgctatatggtttggcggagagagtggtagccacagaatccttggtattt
ttggctgagcagtttgagtttcttcagcctcatcttgatgcagtgatgccagctgccaag
aaaccttttcttcagcagttctattctcagactgtatcaaccgccagtgaactacgcaaa
ccagtttattggattgttgctgctaaagccattgattatgaacagatgctacttctcatg
gctactgtgaaatgggatgtgaaggaaatcatgtcacagcacaatatatatgtagatgct
cttttaaaggaatttgaagaatataacagaaggttgaatgaggtgtctaagagagtccgt
attccactgccagtctcaaatattctgtgggagcactgtatacgcttggccaacagaact
ctcgtagaaggttatgccaatgttaagaaatgcagcaatgaaggacgtgccttgatgcaa
ttggactttcagcaattcttaatgaaactagaaaagctaacagacattagacctattcca
gataaagaatttgtggagacctacattaaagcatactacctaacagaaaatgacatggaa
cgctggatcaaagaacatagggaatattccactaagcagttgaccaatctggtgaatgtt
tgtctgggatcccacatcaacaaaaaggcaagacagaagctgctagctgctattgatgac
atagacagacctaaaagataa
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integrated database retrieval system
