Apteryx rowi (Okarito brown kiwi): 112965940 Help Entry 112965940         CDS       T07573                                  Symbol POLQ Name (RefSeq) DNA polymerase theta   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism arow  Apteryx rowi (Okarito brown kiwi) Brite KEGG Orthology (KO) [BR:arow00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:arow03400]     112965940 (POLQ) Enzymes [BR:arow01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      112965940 (POLQ) DNA repair and recombination proteins [BR:arow03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     112965940 (POLQ) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Methyltransf_10 DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII MTS DUF4332 PrmA Helicase_dom4_arc HHH_5 Motif Other DBs NCBI-GeneID:  112965940 NCBI-ProteinID:  XP_025921272 LinkDB All DBs Position Unknown AA seq 3193 aa AA seqDB search MALNKSMHARNRYKDKPPDFAYLASKYPEFRQHVQATLSGRVSLNFKDPEAVRALTCTLL KEDFGLTIDIPLERLIPTVPLRLNYIHWVEDLIGHQEADKQVLRRGIDIGTGASCIYPLL GATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIVYDF CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKK RLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVQVPSPPS KRRKLEKPRKPITFMVLASTVKELSVKATAMGWDAVEAIAVVRAWVEKILDDLKVQHKRV PCGKDEVSLFLTAIENSWVHLRRKKRERVRQLRELPRASEDVLQAIGEEKNSQKNMSNNL DCEKPKTEDSEMGLMAPDEDICLTAGDELTEESAAKEEHNEHVEEEDVEANQAERSLNKG SSNVKEEPAPSEEASNLTNEKGQSPKEIGRCFLFKCLMNVKKEGNDVLVEMHWVEGQNRD LMNQLCTYLRNQILRLVANGGGSVNGVAPASAMGLREGRRGGPAAPLAAGRAAPSGPATP CRAVLSPPPGLDLSLRGSASPGTGSPGQYQKVNVPEDQADKLLLASWGLPKAVLEKYHSL GVVQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETRKKALLILPFV SVAKEKKHYLQALFQEVGVQVEGYMGSISPAGCFSALDVAVCTIEKANGLINRLIEENQM DSLGMVVVDELHMLGDSHRGYLLELLLTKVRYLTEKVAKRQAKMTNPGFSGIQIVGMSAT LPNLGLLASWLDAELYCTDFRPVPLMEWVKIGSNVYDSSMNLVREFQPKLQLKGDEDHVV SLCYETVCDGHSVLLFCPSKNWCEKLADVIAREFYNLQQAESSAKNSSLSPVVVDGEGIN EVLDQLKHSLSGLDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQGLIRVLAATSTLSS GVNLPARRVIIRTPVFGGKLLDILTYKQMAGRAGRKGVDTVGESILVCKPSERLKGTALL QGSLKPVCSCLLRREGGGVASSMKRAILEIIVGGVASTPDDVQTYASCTLLASSLKDSKW GNEKDQDKVRTGAIEACVAWLLENEFIQVLDSGNKMKAKVYHPTHLGSATLSSSLSPTEA MGIFADLQRAMKSFVLENDLHIVYLVTPVYEEWTTIDWYQFFCLWEKLPASMKRVAELVG IEEGFLARSVKGRIIAKTEKQHRQMAIHKRFFTSLALLDLISEVPLKDMTKKYGCSRGQL QSLQQSAATYAGMVTVFSNRLGWHNMEQLLSQFQSRLTFGVRRELCDLVRISLLNAQCAR MLYNAGFVTVADLAKASAGDVATALKNSVPFKSVRRAVDEDEESAEERRMMRSIWMAGMK GLSESEAASLIVEEARGLLQQDLALMGVQWNPESFLESDASSVTSHESELEDRLLRSNGE WSSQSSRALNKQWHRVQRCNGPGSEAGNLSNIKKGYKRRLSGSTATSSFQSKVQGRGQVQ AEEGNGDVVQSAKKKPNMTQDKENMEGVSQVKTRTDSRRAILQLPTEQGETPALRKMSLT SRLIRSMDTHLNRTRNKTTSKTASKLRRSLLENSNMLRTDIQEPSAFHHHISKDIFFPDQ NNKEFIEKGPVTHKVSNSLQIGEVNVGSKNKMAGLFTEPSTTSEGMPKGRACFQAAIIMQ STSHVSMETDDIAESPVISTSARTLKNENNDDKQNKINKMQAGKSCTDKMVGEQQTALDT DHCNVTASSSGDGHVHNGSRKQKSVCFCPGEDKSCHFQIQNSGKNRSKKPNGILLQAGGV QKADSHTEDFLKDSLLKSRAACDADGVQYGPFSDPISDSRDFEDSFQLDTQTERIIKQEV AVGIAGEQGKQGSELAALPLQEIPKKLSCASTSQTANATDERLAATVRKLGLSSLATTNN IIKTSDHHCSNKVMESGSLNLQPVVKGTESAPCLKGNDFSVTDSQLHSFLQDYQTQNSVK GECASKGLNKMTSPVGRQHLVQVECHPVPETSLNMSDSLLFDDSFSNVNDLSAIHVMEVH REEPVGKQGALLPTDGLLQNLRPVQNKFDVSGNQKEREDPAQCNDVSLAFSDLIAEVVDH ANSPSFQGDLPSTIHGQSGLRNPVICVDDPRPMDLVGDQSEKLQRSQQALDKKIHPVVWT DCTFELSPGLQDVLDKWPSPSGIEPVSVSPRSSCLKGKLVASNANQEPAPVFEFDRCQPE PLPTCQDLKNCFKVKENKMEALDAQKLDCITLPLKGSNRTSDPLPDSINGFIPPTPPKEP SPKSSVSLSVKSGKKRHVTYTNEGQQFQSKQNRKDDAEQQVKTLRLNAGSADPTEVDIRD GSVIDQGFSLQLSQDVLPLVPSSAESFTIIDVASDKALFQTFIAEWREKSRFSISVACER TKCLLSPRSTIGGRFRQVKFPQWMRVKDDGFPVQGCEDILVVGLAVCWGGKDAYYISLQQ KQDQTEISMSLAPPPLDESLSVTERLYHLQLYLQNMTNQERSLVMYNFIQHYKTLVMACG ISLEGSFEDPKVACWLLDSGSKERTLHNMVMNFLPHELPLLEGVGTGQGVQSLGLSATTD RSGRYRAAIESVLIFNVMNQLHSELQKENLTDVFSKVEMPTHYCLALLELNGIGFSTAAY ETQKQVMQAKLNDIETKAYQLAGHTFSLTSPDDVAEVLFLELKLLQNGDVKVKGNKKTLG CARRATANGNRIRLSKQFSTTKDVLEKLKVLHPLPGLILEWRRINNAITKVVFPLQREKR FNSALGMERIYPVSQTHTATGRITFTEPNIQNVPRDFEIEMPTVVEESPPSRAQGNGYSR AVSGGRGRKHSSILPNGPKAQAEDRAEERGIPFSVSMRHAFVPFPGGLILAADYSQLELR ILAHLSSDCRLIQALNGGIDVFKRIAAEWKMIDPEAVGDSIRQQAKQICYGIIYGIGAKS LGEQMGIDENEAASYIESFKSRYTGIQKFLTETVRSCKRDGFVQTILGRRRYLPAIRDPN PYSKAHAERQAVNTTVQGSAADIVKTATVNIQRRLEGFSSVIKSHGHLESSFQRDKTGRL EGKRSRGMLPPVSGGFFILQLHDELLYEVAEDDVIQVARIVKHEMENAVKLLVKLNVKVK IGPSWGDLQDLEL NT seq 9582 nt NT seq  +upstreamnt  +downstreamnt atggccctcaacaagtccatgcatgcgcgaaaccgctacaaggacaaaccgcccgacttc gcctacctggcctccaagtaccccgagttccggcagcacgtgcaggccaccctgtccggc agggtgagcctgaacttcaaggaccccgaagcggtgagggctctgacgtgcactctcctg aaagaagattttggacttacgatcgacatccccttggaaaggcttattcctactgttccc ttgcgactgaactatatccactgggtggaagatcttatcggtcatcaggaggccgataag caagttcttaggcgaggaattgacatagggacaggggcatcttgcatatacccattactt ggagcaactttgaatggctggtactttcttgcaacagaagtggatgatatgtgcttcaat tatgccaagaaaaatgtggaacagaataacttgtctgatcttataaaagtggttaaggta ccacagaagactcttttaatggatgcactgaaagaagaatctgagattgtttatgatttt tgcatgtgcaaccctcccttttttgccaaccagttggaagcaaagggagtaaattctcga aacccacggcgacctcctcccagttctgtaaatactggagggatcacagaaatcatggct gaggggggagaactagaatttgtcaaaagaattattcatgatagtctgcaacttaaaaag agattacgatggtacagttgcatgctgggaaagaaatgcagtttagcaccattgaaagag gaacttcgaatccagggggttcctaaagttacctatactgaattctgtcaagggcgtacc atgagatgggcactggcatggagtttctatgatgatgtacaagtgccttcgccaccctct aaaagaagaaaactagaaaaaccccgaaaaccaattacattcatggtcttggcttctaca gtcaaagagttatccgtcaaagctacagctatgggctgggatgctgtagaagccattgct gtggttagagcctgggtagagaagattcttgatgatctgaaggttcaacataaacgtgtt ccctgtggaaaagatgaagttagcctgtttctgactgcaatcgaaaactcctgggttcat ctgaggcgaaagaaacgagagagagtaaggcaattaagagaacttcctcgagcttctgaa gatgttctgcaagcaataggagaggaaaaaaacagccagaaaaatatgagcaacaatcta gactgtgaaaaacccaagactgaggactctgaaatggggttaatggcacctgatgaggat atctgcttgactgcaggtgacgagctaacggaagaatctgctgccaaagaagaacacaat gagcatgtggaggaggaggacgtggaagcaaatcaggcagaaaggtcacttaataaaggt tccagtaatgtgaaggaggaacctgctccttcagaggaagctagcaatctaacaaatgaa aaaggacaaagtcccaaagaaattggtagatgctttctctttaagtgtttaatgaatgtg aagaaagaaggaaatgatgtattagtagaaatgcactgggttgaagggcagaacagagac ttgatgaaccaactgtgcacatacttacggaaccagattcttcgcctggttgctaatggc ggcggcagcgttaatggcgtcgccccagcctcggcgatggggcttcgcgaagggcggcgg ggcggcccggccgctcctctcgcggcggggagggctgccccgtccggccccgcgactccg tgccgcgctgtactgagtcccccgcccggcttggacctctccctgcggggcagtgcgagc cccggcacgggctcgccagggcaatatcagaaggtaaatgttcctgaagaccaagcagac aagttgctccttgcaagctggggtcttcccaaagcagttctggaaaaatatcacagtctg ggagtagtacagatgttcgaatggcaagcagagtgtctaatgcttggacaagttctggaa gggaagaacctagtttactcagctcctaccagtgctggcaagactcttgttgctgaattg ctcattctgaagcgagtcttggagactcgtaagaaagctcttctgatccttccctttgtc tctgtggccaaagagaagaaacattatctgcaggccctgtttcaggaggtgggtgtgcaa gttgaaggctacatgggaagcatctctcccgctggatgtttctctgccctggatgttgct gtctgcaccattgagaaagccaacggtctaatcaatagactcatagaagaaaaccagatg gactcacttggaatggtggttgtggatgagttgcatatgctgggagactctcatcgagga tatctgttggaactccttctgaccaaagttcgatatcttacagagaaggtagcaaagcga caggcaaagatgaccaatcctggttttagtgggatacagatagtaggcatgagtgctacc ctccctaacttgggactcctagcctcatggttggatgcagagctgtattgtacagacttt cgtcctgtgcccctcatggagtgggtgaaaattggcagcaacgtttatgactcttccatg aatctagtgcgagaattccagcccaagcttcaactgaagggagatgaagaccatgttgtg agcctgtgttatgagactgtttgtgatggtcattcagtcctgctcttctgtccatccaag aactggtgtgagaagctggcagatgttattgccagggagttctacaatttgcagcaagct gagagttctgcaaaaaactcatccctttccccagttgttgtggacggagaagggataaat gaggttctggatcagttaaagcattctctctcaggcctggactccgtgctccaacgtact ttaccatggggagtagcatttcatcatgcaggtcttacttttgatgaacgggacatcatt gaaggagcctttcgccagggcttgattagagtcctagcagcaacctccacactctcatct ggagtgaatttgcctgcacgccgagtaattatacgaactcccgtgtttggtggcaaactg ctggacattctcacttacaagcagatggctggaagggctggcaggaaaggagtagacaca gtgggtgagagcattttagtttgcaagccctcagaaagattgaaaggaactgctctactt cagggatctctcaagcctgtttgcagttgcttgcttagaagggaagggggaggtgtcgct tctagcatgaaacgagcaatacttgagatcatagtggggggagtggccagcactccagat gatgtgcagacctatgcttcttgcactcttcttgcatccagcttgaaagatagtaagtgg ggaaatgagaaagatcaagacaaagtgcggactggagctattgaggcttgtgtggcatgg ctgctagagaatgaattcattcaggttctggactctggcaacaaaatgaaagcgaaagtt tatcatccaacacatcttggctcagctactctttcctcttctctttcaccaactgaagcc atgggaatctttgctgacctgcagcgagctatgaaaagctttgttctggagaatgatctg catattgtctatttggttaccccagtgtatgaggagtggaccacaattgattggtaccag tttttctgcctatgggagaagctgcctgcctcaatgaagcgtgtggctgagctggtgggg attgaagaaggctttctggctcgctctgtaaagggcagaatcatagctaaaacagagaaa cagcataggcaaatggccatccacaaaaggtttttcaccagtcttgccctcctggattta atcagtgaggttcccttaaaggatatgaccaagaaatacggttgtagtcgtggccagctt cagtccttacagcagtctgctgccacctatgcaggaatggtaacagttttctctaatcga ctgggctggcacaacatggaacaattgctttctcagttccagagccgactcacttttggt gttcgtagggagctatgtgacttggtacgcatctctctgctgaatgcacagtgtgctagg atgctttacaatgctggctttgtcacagtggctgatcttgctaaagccagtgctggtgat gtggcaactgctctgaagaattccgtgccatttaaaagtgtccgtagggctgtggatgaa gatgaagaatcagcagaggagcgtcggatgatgcgcagcatctggatggccggaatgaag ggcttaagtgaaagtgaagcagcttccctcattgtggaggaagcccggggacttcttcaa caggacttggcgctgatgggagtgcagtggaacccagagtcttttcttgagtctgatgca tcctctgtaaccagccatgagtcagagctggaagatagactacttagatccaacggagaa tggtcttctcagtcttctagggcactaaacaaacagtggcacagagttcaacgttgtaat ggccctggttctgaggctggaaacttatcaaatattaaaaagggatataaaaggcgacta agtggtagtacagcaacctccagttttcagagcaaagtccaaggcaggggacaggttcag gcagaggaaggaaatggtgatgttgtgcagagtgctaaaaaaaagccaaatatgactcaa gataaggaaaacatggaaggtgtttctcaggtcaaaaccaggacagattccaggagagca attctacaactccctactgagcagggagagacaccagcattgagaaaaatgtctttgact tctagattgataagaagtatggacacacatttaaaccggactaggaacaaaactacttca aaaactgcttcaaaactgcggaggtcactgcttgaaaattcaaatatgcttagaacagac atacaggagccttctgctttccaccaccacatttctaaagatattttttttcctgaccaa aataataaggaatttatagaaaaagggcctgtgactcataaagtctcaaattctttacag ataggggaagttaatgttgggagcaaaaataaaatggcaggattatttactgagccttcc accactagtgaaggcatgcctaaggggagagcatgttttcaggcagctattataatgcag agtacttcacatgtcagcatggagacagatgatattgcagaaagtccagtaatatctact agtgctaggacactgaaaaatgaaaataatgatgataagcagaataaaatcaataaaatg caagcaggtaagagctgtactgacaagatggttggtgagcagcagacagctctggacaca gatcattgtaatgtaactgctagcagttctggagatggacatgtacataatggtagcagg aaacagaagtctgtgtgtttttgtcctggtgaggataaatcctgccactttcagattcag aacagtggcaaaaataggagcaaaaagcccaatggaatattgttacaagctggaggagtg cagaaagctgacagtcatactgaggattttctgaaagactctctattaaaatccagagct gcttgtgatgcagatggtgttcagtatggtccattctctgatcccatctctgactctaga gactttgaagacagcttccagttggatactcagactgagaggataataaaacaggaggta gcagttggaattgcaggagagcagggaaaacaaggttcagagctggcagcattaccactg caggaaatccccaagaaactgagctgtgctagcacttcacaaactgcaaatgctactgat gaaaggctggctgcaacagttaggaaactgggcttgtcgagtcttgccacgacaaataac atcataaaaacctcagatcaccactgcagtaataaagttatggagtctggaagccttaat ttacagcctgtggtgaaaggtacagaatctgcaccttgccttaaaggaaacgatttctca gtgactgactcccagctgcacagttttctacaggattaccagacccaaaattcagtgaaa ggggagtgtgcttctaaaggccttaataaaatgacctctcctgttggtaggcagcacctt gtgcaagtagaatgccatcctgtccctgaaacaagcctgaacatgagtgatagcttgctg tttgatgatagtttcagcaatgttaatgacctttcagctattcatgtcatggaggtgcac agggaagaacccgtgggaaagcagggggctttgcttcccacagatggtcttttgcagaac ctaaggcctgttcagaataaatttgatgtcagtggcaatcagaaagagcgtgaggatcct gcacagtgtaacgatgtgtctctagcattctctgatctaatagctgaagttgtggatcat gcaaattccccatcttttcagggagatcttccttctacaattcatggtcagtcaggatta agaaacccagtgatttgtgttgatgaccccagaccaatggatctggtgggggatcaaagt gagaagctccaaagaagccaacaagctttagacaagaaaatccatccggtggtgtggact gactgcacatttgaactaagcccaggattgcaggatgtattagacaaatggcctagtcct tcaggcattgaaccagtttcagtaagtccaagaagctcctgtttgaaaggaaagttagtt gcttctaatgctaatcaagagccagctccagtttttgaatttgaccgttgtcagccagag cctttgcccacatgccaggatttaaaaaactgtttcaaagttaaagaaaacaaaatggaa gccttggatgctcagaaattagactgtatcactcttccgctcaaggggagcaacagaaca tctgatccgctgccagatagtattaatgggtttattcctccaacacccccaaaagaacct tctccaaagagttctgtttccctctctgtgaaatctggaaaaaagagacatgtcacctac acaaatgaagggcagcagtttcagtcaaagcagaataggaaggatgatgcagagcagcag gtaaaaacactccggttgaatgctgggagtgcagacccaactgaggtggatataagagac ggttccgttatagaccaaggcttttcactgcagctgtctcaggatgttttgccactcgtt ccatcaagtgctgaaagcttcactattattgatgtagcaagtgacaaagcacttttccag acttttattgcagaatggagagagaaaagcagattctcaatctcggtagcgtgtgaaaga acaaagtgtcttttgtctcccagatcaacaattggtggcagattcagacaagtaaaattt cctcagtggatgcgagttaaagatgacggatttcctgtccaaggctgcgaagacatattg gtagttggactggcagtgtgttggggtggaaaagatgcctactatatctctttgcagcag aagcaagaccagacagaaatcagtatgagtttggcaccaccacctttggatgaaagcctg tctgtaacagagagactgtatcatctgcagctgtacctgcagaatatgaccaatcaagag cgctcacttgtcatgtacaacttcattcagcactacaagaccctggtgatggcttgcggc atctccttggaaggaagttttgaggacccaaaggttgcgtgttggctgcttgattctggc tctaaggaacgtacacttcacaacatggtgatgaactttctcccccacgagctacctcta ctggaaggggtaggcactggccaaggggtgcagagcctggggcttagtgccactacagat cgttctgggcggtacagagcagctatagagtctgtgcttatcttcaatgtcatgaaccaa ctccatagtgaattacagaaggaaaatctgacagatgtgttttctaaagtggagatgccc acccattattgcttggctctgctggagctgaatggcattggttttagcacagcagcatat gaaacccagaaacaagtcatgcaagctaaactgaatgacattgagaccaaggcgtatcag ctggccggccacactttctccttgaccagccctgatgacgtcgcagaggttttgttcctg gagctgaagttgctgcaaaatggagatgtgaaagttaaagggaacaagaaaactctgggt tgtgccagaagagcaactgctaatgggaacaggattaggttgagcaagcagttcagtaca accaaggatgttttggagaaattaaaggtacttcacccattgccagggctgatactggaa tggagaaggatcaacaatgctattactaaagtggtgttcccactacagagggaaaagcgt ttcaattctgcactaggaatggagaggatatatccagtgtcacagactcacacagctaca ggtcgaataactttcacagagccaaatatccagaatgtgccaagagattttgagatcgaa atgccaacggtggttgaagagagcccaccctcccgagcccagggaaatggttattctcgt gctgtttctgggggcagaggtagaaagcattccagtattttgcctaatggccccaaggct caggctgaagacagagctgaagaaagaggaatcccgttttctgttagcatgaggcatgct tttgttcccttcccaggtggcttaatcttggctgctgattactctcagcttgaactgagg atccttgctcacttgtctagtgactgccgactcattcaagccttaaacggaggtattgat gtctttaagaggattgcagcagaatggaaaatgattgatcctgaagctgttggagacagc atcaggcaacaagctaagcagatttgctatggtatcatctatggaataggagcaaaatct ttaggcgagcagatggggattgatgaaaatgaagctgccagctacattgaatccttcaaa tccagatacacagggattcagaaattcttgacggagacagtgaggagctgcaaaagagat gggtttgtgcagaccattctgggtagacggagatacctgccagctatcagagatccaaac ccctacagtaaagctcatgcagagcgacaggccgtgaatacaactgttcagggatctgct gctgacattgtcaaaacagccaccgtgaacattcaaaggcgcctggaaggtttctcctct gtgatcaagtctcatggacatctggagagctcattccagagagataagactggaaggcta gaggggaagagaagcagaggcatgttacctcccgtcagtggaggtttctttattctccag ctccatgatgaactcctctatgaagttgcagaggacgatgtcatccaggtagctcggatt gtcaagcacgagatggaaaacgcagtcaaactcttggtaaagctgaacgttaaagtgaaa attggacctagctggggagacctgcaggacctggagctttag

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