Apteryx rowi (Okarito brown kiwi): 112966598
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Entry
112966598 CDS
T07573
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112966598 (SOX5)
Transcription factors [BR:
arow03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112966598 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112966598
NCBI-ProteinID:
XP_025922682
Ensembl:
ENSARWG00000018219
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MSSKRPASPYGEADGEVAMVTSRQKVGEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLL
TQENCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQSGESLSSTALGTPE
RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE
SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ
QLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDP
YPVQLIPTTMAAAAAATPGLGPLQLQELYAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTS
IHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPTLRINSGASSLKSSV
PATLASPSARANTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCR
TEKDKTTLETLTQQLAVKQTEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNE
PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLS
KQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATA
GVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQTDDVNG
EIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcgaccagcctctccgtatggggaagcagatggagaggtagccatggtg
acaagcagacagaaagtgggagaagaggagagtgacgggctcccagcctttcaccttccc
ttgcatgtgagttttcccaacaagcctcactctgaggaatttcagccagtttctctgctg
acgcaagagaactgtggccataggactcccacttctcagcacaacacaatggaagttgat
ggcaataaagtgatgtcttcatttgccccacacaactcatctacctcacccttgaaggca
gaagaaggtgggcgtcagagtggagaatcattgtccagcacagccctgggaacccctgaa
aggcgcaaagggagcctagcggatgtagtagacacccttaagcaaagaaaaatggaagag
ctcatcaaaaatgagccagaagaaactcccagtattgaaaagctactatcaaaggactgg
aaagacaagcttcttgccatgggatcagggaactttggagaaataaaagggactccagaa
agcctcgctgagaaagaaaggcagctcatgggtatgatcaatcagctgaccagtttgcga
gaacagctgttagcagctcatgatgaacagaagaagctggctgcatcacagatcgagaaa
caacgccaacaaatggagctggctaagcagcaacaagaacagattgcaagacaacagcag
cagctcctgcagcaacaacacaaaattaaccttcttcagcaacagatccaggtccagggt
cagctgcctccattaatgattcccgtattccctccagaccaacgaaccctagcagcagct
gctcagcaaggattccttcttcctccgggtttcagctacaaagcgggatgcagtgaccct
taccctgttcagctgatcccaactaccatggcagctgctgccgcagcaacaccaggctta
ggcccactccaactgcaggaattgtatgctgcccaacttgctgcaatgcaagtgtctccg
ggaggcaagatacctggcataccccaaggtaaccttggtgctgctgtatcccctaccagc
atccacacagacaagagcacaaacagccctccacccaaaagcaaggatgaagtggcccag
cctctgaacctttcagccaaacccaagacatctgatggcaaatctcccacatcacccacc
tctcctcatatgccaactctgagaataaatagtggggccagttcactaaaatcctctgtg
ccagcaacattagctagtccttcggccagagctaacacaataggttatttaaatgaccac
gatgctgttaccaaggcaatccaggaggcccgacagatgaaggagcaacttcggagggaa
caacaggtgcttgatgggaaagtggctgttgtgaatagtctgggtctcaataactgcagg
acagaaaaggacaaaacaacactggagaccctgactcagcaactggcagtaaaacagact
gaagacgggaagtttagccacgcaatgatggatttcaacatgagtggagattctgacgga
agtgcaggagtttcagaatctcgaatttatcgggaatccagagggcgtggtagtaatgag
ccccatatcaagcgtccaatgaatgcattcatggtgtgggctaaagatgaacgaaggaag
atccttcaagccttccctgacatgcacaactccaatatcagcaagatactaggatctcgc
tggaaagctatgacaaacctagagaagcagccatactatgaggaacaggcccgactcagc
aaacagcacctggagaaatacccagactacaaatataagccaaggccgaagcgtacctgc
cttgtagatggcaaaaaattacgcattggcgagtacaaggctatcatgcgcaacagacgc
caggagatgaggcagtattttaatgttgggcaacaagcacagattcccattgccacagca
ggcgtagtttacccaggagccatcgccatggcaggtatgccttccccacacctgccctcc
gagcactcaagcgtctccagcagcccggagcccggcatgcccgtcatccagagcacttac
ggcatcaaaggtgaggagcctcatatcaaggaagagatgcagaccgatgacgtcaacgga
gaaatctatgacgaatacgatgaggaagaggatgaccccgatgtggactatggcagtgac
agtgaaaatcacattgcggggcaagccaactga
DBGET
integrated database retrieval system
