Apteryx rowi (Okarito brown kiwi): 112966934
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Entry
112966934 CDS
T07573
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112966934 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arow03041
]
112966934 (DDX5)
03009 Ribosome biogenesis [BR:
arow03009
]
112966934 (DDX5)
Enzymes [BR:
arow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112966934 (DDX5)
Spliceosome [BR:
arow03041
]
Complex A
U1 snRNP components
U1 related factors
112966934 (DDX5)
Complex B
112966934 (DDX5)
Ribosome biogenesis [BR:
arow03009
]
Eukaryotic type
Pre-60S particles
Helicases
112966934 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
112966934
NCBI-ProteinID:
XP_025923309
Ensembl:
ENSARWG00000007486
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTVQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERNYGALGKRDFGAKAQNGAFSAQSYSNGTPFGNGF
AAAGMQAGFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPAS
YSQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagcccctcgttttggaggaagt
agaggtggacctctctctggaaagaagtttggaaaccctggggaaaagcttacaaaaaag
aaatggaatttggatgaactgcccaaatttgagaagaacttctatcaagaacatcctgat
gtagttagacgtactgtgcaagaggttgaacagtacagatcaagcaaagaagtcacagtc
aggggccataactgtccaaaaccaattataaacttctatgaagctaactttcctgcaaat
gtcatggaagtgattcagaggcagaacttcactgaaccaactgctattcaagcacaagga
tggcctgttgccttgagtggactggatatggttggagtagcacagactggatcagggaaa
acactgtcttacttgttgcctgccattgtgcatataaatcatcagccattcctagagcga
ggagatggacctatatgtcttgtgctggcaccaactcgtgaactggctcaacaagtgcag
caggtagctgcagaatatagtagagcatgccgtttgaagtctacgtgtatttatggaggt
gctccaaagggaccacaaattcgtgacttagaaagaggtgtggaaatctgcattgcaaca
cctggaagacttatagacttcttagaagctggaaagaccaatctcaggaggtgtacttac
cttgtacttgatgaagctgaccgaatgcttgacatgggatttgaaccacagatcagaaaa
attgtagatcagatcagacctgacaggcagactctgatgtggagtgcaacatggccaaag
gaagtaagacagctggctgaagactttttgaaagaatatgtacacatcaacattggagca
ttagaattgagtgcgaaccacaacattcttcagattgtggatgtgtgtcatgatgtagag
aaagatgacaagcttattcgcttgatggaagaaatcatgagtgagaaggaaaacaaaaca
attgtttttgtggaaaccaaaagacggtgtgatgatcttaccaggaaaatgaggagagat
gggtggccagcaatgggtatccatggtgataaaagtcagcaggagcgggactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccga
ggcgatcgacgtgacagatattctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaaattatggtgcactaggaaagagagacttcggagcaaaagct
caaaatggggccttcagtgcccaaagctacagtaacggaactccttttggaaayggtttt
gcagctgcaggcatgcaagctggcttcagggctggtaaccctgcaggagcttaccagaat
ggctatgatcagcaatatggaagtaacattgcaaatatgcacaatggcatgaaccaacag
cagtatgcatatcctgccactggtgctgctcctatgataggttacccaatgccagcaagt
tattctcaataa
DBGET
integrated database retrieval system
